FFCP PHASE1:Mm9::chr3:137902634..137902649,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=8|UniProt=|association_with_transcript=-6bp_to_uc008rnc.1_5end|description=CAGE_peak_1_at_uc008rnc.1_5end|id=chr3:137902634..137902649,-|ontology_enrichment_celltype=CL:0000181!1.20e-09!5;CL:0000417!1.20e-09!5;CL:0000668!1.20e-09!5;CL:0000412!1.20e-09!5;CL:0000182!1.20e-09!5|ontology_enrichment_celltype_v019_2=CL:0000182,3.74e-20,5;CL:0000057,2.43e-07,1;CL:0000632,2.43e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!6.49e-19!49;UBERON:0005173!6.49e-19!49;UBERON:0002417!6.49e-19!49;UBERON:0000916!6.49e-19!49;UBERON:0002107!8.44e-16!22;UBERON:0007499!8.44e-16!22;UBERON:0006925!8.44e-16!22;UBERON:0009497!8.44e-16!22;UBERON:0000015!8.44e-16!22;UBERON:0002423!8.44e-16!22;UBERON:0006235!8.44e-16!22;UBERON:0008835!8.44e-16!22;UBERON:0003894!8.44e-16!22;UBERON:0004161!8.44e-16!22;UBERON:0008836!8.44e-16!22;UBERON:0009854!5.40e-15!23;UBERON:0009856!5.40e-15!23;UBERON:0002365!1.41e-13!25;UBERON:0002330!1.41e-13!25;UBERON:0009569!8.73e-13!66;UBERON:0005256!1.33e-09!47;UBERON:0005177!7.39e-09!85;UBERON:0003914!2.80e-08!47;UBERON:0002113!1.33e-07!14;UBERON:0003918!1.33e-07!14;UBERON:0005095!1.33e-07!14;UBERON:0007687!1.33e-07!14;UBERON:0002100!4.60e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.77e-21,22;UBERON:0007499,2.77e-21,22;UBERON:0006925,2.77e-21,22;UBERON:0009497,2.77e-21,22;UBERON:0000015,2.77e-21,22;UBERON:0002423,2.77e-21,22;UBERON:0006235,2.77e-21,22;UBERON:0008835,2.77e-21,22;UBERON:0003894,2.77e-21,22;UBERON:0004161,2.77e-21,22;UBERON:0008836,2.77e-21,22;UBERON:0009854,2.56e-20,23;UBERON:0009856,2.56e-20,23;UBERON:0002365,1.29e-18,25;UBERON:0002330,1.29e-18,25;UBERON:0001962,3.65e-12,2;UBERON:0001961,3.65e-12,2;UBERON:0001744,3.65e-12,2;UBERON:0005172,4.54e-11,49;UBERON:0005173,4.54e-11,49;UBERON:0002417,4.54e-11,49;UBERON:0000916,4.54e-11,49;UBERON:0005256,6.87e-10,45;UBERON:0003914,2.01e-09,47;UBERON:0003104,1.20e-08,61;UBERON:0009142,1.20e-08,61;UBERON:0002465,2.06e-08,3;UBERON:0009569,6.79e-08,66;UBERON:0003929,6.80e-08,55;UBERON:0002368,3.83e-07,60;UBERON:0006834,5.53e-07,1;UBERON:0003199,6.32e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.27993938234725,1.37645568640302,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.1148356943485,91.1161587168386,53.4306159721439,74.0745115890343,95.4297269517325,26.4035509847693,0,0,0,0,0,0,0,0,0,0,28.2034182906078,0,0.29688427812965,0,0,0,0,0,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1270773567308,0,0.193952487167626,0.631222379012867,0.189709611372772,0,0.156998727841375,0.123397163921801,82.4138303302274,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0.624075346229121,14.3969960429854,23.1422663443267,13.9908621195376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68914227906064,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@uc008rnc.1}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt= | |||
|association_with_transcript=-6bp_to_uc008rnc.1_5end | |||
|description=CAGE_peak_1_at_uc008rnc.1_5end | |||
|id=chr3:137902634..137902649,- | |||
|ontology_enrichment_celltype=CL:0000181!1.20e-09!5;CL:0000417!1.20e-09!5;CL:0000668!1.20e-09!5;CL:0000412!1.20e-09!5;CL:0000182!1.20e-09!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.74e-20,5;CL:0000057,2.43e-07,1;CL:0000632,2.43e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!6.49e-19!49;UBERON:0005173!6.49e-19!49;UBERON:0002417!6.49e-19!49;UBERON:0000916!6.49e-19!49;UBERON:0002107!8.44e-16!22;UBERON:0007499!8.44e-16!22;UBERON:0006925!8.44e-16!22;UBERON:0009497!8.44e-16!22;UBERON:0000015!8.44e-16!22;UBERON:0002423!8.44e-16!22;UBERON:0006235!8.44e-16!22;UBERON:0008835!8.44e-16!22;UBERON:0003894!8.44e-16!22;UBERON:0004161!8.44e-16!22;UBERON:0008836!8.44e-16!22;UBERON:0009854!5.40e-15!23;UBERON:0009856!5.40e-15!23;UBERON:0002365!1.41e-13!25;UBERON:0002330!1.41e-13!25;UBERON:0009569!8.73e-13!66;UBERON:0005256!1.33e-09!47;UBERON:0005177!7.39e-09!85;UBERON:0003914!2.80e-08!47;UBERON:0002113!1.33e-07!14;UBERON:0003918!1.33e-07!14;UBERON:0005095!1.33e-07!14;UBERON:0007687!1.33e-07!14;UBERON:0002100!4.60e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.77e-21,22;UBERON:0007499,2.77e-21,22;UBERON:0006925,2.77e-21,22;UBERON:0009497,2.77e-21,22;UBERON:0000015,2.77e-21,22;UBERON:0002423,2.77e-21,22;UBERON:0006235,2.77e-21,22;UBERON:0008835,2.77e-21,22;UBERON:0003894,2.77e-21,22;UBERON:0004161,2.77e-21,22;UBERON:0008836,2.77e-21,22;UBERON:0009854,2.56e-20,23;UBERON:0009856,2.56e-20,23;UBERON:0002365,1.29e-18,25;UBERON:0002330,1.29e-18,25;UBERON:0001962,3.65e-12,2;UBERON:0001961,3.65e-12,2;UBERON:0001744,3.65e-12,2;UBERON:0005172,4.54e-11,49;UBERON:0005173,4.54e-11,49;UBERON:0002417,4.54e-11,49;UBERON:0000916,4.54e-11,49;UBERON:0005256,6.87e-10,45;UBERON:0003914,2.01e-09,47;UBERON:0003104,1.20e-08,61;UBERON:0009142,1.20e-08,61;UBERON:0002465,2.06e-08,3;UBERON:0009569,6.79e-08,66;UBERON:0003929,6.80e-08,55;UBERON:0002368,3.83e-07,60;UBERON:0006834,5.53e-07,1;UBERON:0003199,6.32e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.27993938234725,1.37645568640302,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.1148356943485,91.1161587168386,53.4306159721439,74.0745115890343,95.4297269517325,26.4035509847693,0,0,0,0,0,0,0,0,0,0,28.2034182906078,0,0.29688427812965,0,0,0,0,0,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1270773567308,0,0.193952487167626,0.631222379012867,0.189709611372772,0,0.156998727841375,0.123397163921801,82.4138303302274,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0.624075346229121,14.3969960429854,23.1422663443267,13.9908621195376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68914227906064,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@uc008rnc.1 | |||
}} |
Revision as of 01:40, 14 September 2013
Short description: | p1@uc008rnc.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc008rnc.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | -6bp_to_uc008rnc.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.74e-20 | 5 |
fibroblast | 2.43e-07 | 1 |
hepatic stellate cell | 2.43e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 2.77e-21 | 22 |
epithelial sac | 2.77e-21 | 22 |
digestive gland | 2.77e-21 | 22 |
epithelium of foregut-midgut junction | 2.77e-21 | 22 |
anatomical boundary | 2.77e-21 | 22 |
hepatobiliary system | 2.77e-21 | 22 |
foregut-midgut junction | 2.77e-21 | 22 |
hepatic diverticulum | 2.77e-21 | 22 |
liver primordium | 2.77e-21 | 22 |
septum transversum | 2.77e-21 | 22 |
liver bud | 2.77e-21 | 22 |
digestive tract diverticulum | 2.56e-20 | 23 |
sac | 2.56e-20 | 23 |
exocrine gland | 1.29e-18 | 25 |
exocrine system | 1.29e-18 | 25 |
gut-associated lymphoid tissue | 3.65e-12 | 2 |
mucosa-associated lymphoid tissue | 3.65e-12 | 2 |
lymphoid tissue | 3.65e-12 | 2 |
abdomen element | 4.54e-11 | 49 |
abdominal segment element | 4.54e-11 | 49 |
abdominal segment of trunk | 4.54e-11 | 49 |
abdomen | 4.54e-11 | 49 |
trunk mesenchyme | 6.87e-10 | 45 |
epithelial tube | 2.01e-09 | 47 |
mesenchyme | 1.20e-08 | 61 |
entire embryonic mesenchyme | 1.20e-08 | 61 |
lymphoid system | 2.06e-08 | 3 |
subdivision of trunk | 6.79e-08 | 66 |
gut epithelium | 6.80e-08 | 55 |
endocrine gland | 3.83e-07 | 60 |
uterus or analog | 5.53e-07 | 1 |
egg chamber | 6.32e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.