FFCP PHASE1:Mm9::chr12:113345002..113345021,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=104816|HGNC=|UniProt=A0JNU3|association_with_transcript=108bp_to_ENSMUST00000079400,NM_001081169,uc007pek.1_5end|description=CAGE_peak_2_at_Aspg_5end|id=chr12:113345002..113345021,+|ontology_enrichment_celltype=CL:0002453!1.88e-07!8;CL:0000333!2.57e-07!10;CL:0000095!2.57e-07!10;CL:0000243!2.57e-07!10;CL:0000123!2.57e-07!10;CL:0000125!2.57e-07!10;CL:0000030!2.57e-07!10;CL:0000339!2.57e-07!10|ontology_enrichment_celltype_v019_2=CL:0000182,1.22e-10,5;CL:0000151,2.26e-10,3;CL:0000499,2.26e-10,3;CL:0000327,2.26e-10,3;CL:0002453,2.28e-09,8;CL:0000128,1.57e-08,6;CL:0000126,1.57e-08,6;CL:0000127,1.57e-08,6;CL:0000708,1.66e-07,2;CL:0000333,1.96e-07,10;CL:0000095,1.96e-07,10;CL:0000243,1.96e-07,10;CL:0000123,1.96e-07,10;CL:0000125,1.96e-07,10;CL:0000030,1.96e-07,10;CL:0000339,1.96e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.03e-10,22;UBERON:0007499,3.03e-10,22;UBERON:0006925,3.03e-10,22;UBERON:0009497,3.03e-10,22;UBERON:0000015,3.03e-10,22;UBERON:0002423,3.03e-10,22;UBERON:0006235,3.03e-10,22;UBERON:0008835,3.03e-10,22;UBERON:0003894,3.03e-10,22;UBERON:0004161,3.03e-10,22;UBERON:0008836,3.03e-10,22;UBERON:0009854,9.92e-10,23;UBERON:0009856,9.92e-10,23;UBERON:0002365,7.99e-09,25;UBERON:0002330,7.99e-09,25;UBERON:0003210,1.66e-07,2|phase1_expression=0,0.697950815278722,1.36499771816861,0.30246421130683,0,0.839396359559449,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,1.43993180514066,0.68822784320151,0,0.430761996159075,1.50829862880122,0.380046838912748,0.504060259519861,0.665191531965914,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5182615095686,0.65407546914134,0.439372365468944,1.1665793944457,8.81914456239784,1.43752564364972,0,0,0,0.257259436035947,0.85960031981627,0,0,0,0,2.37191172448392,9.78224275722253,0,0,0,0.898800331555214,1.15265491596466,0,0,0,0,0,0,0,0,1.10115880999389,0,0.153606533256243,0,0,0,0.279182999001381,0.56276261003168,0.61119299110724,0,0,0,0.075726193333184,0.0755715601067855,0.289864488701678,5.16254326188832,4.75979933595425,7.55584468292944,5.19821133958135,5.82434953226536,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0.148442139064825,0,0,0,0,0.117588707135705,1.0053327306374,0.247194967734374,0.578397427679647,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0,0,0.124406970610093,1.26361379216837,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,0,0,0,0,0.213288250535234,0.464473343720877,0.77320476793256,2.01683524623343,1.11189021922435,0.380451252225118,0.474529061544512,0.494096864172033,0.251335208800269,0.198956472041151,0.974820435595601,0,0,0.398282546508734,0,0.228497025219458,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0.590440591918409,0.31399745568275,0.740382983530803,2.37162101669719,0,0,0,0,0,0,0.287696137450811,0.648540907100142,0.823684239564244,0,0.372140947668503,0.312037673114561,1.76805214562978,3.94674309748207,6.27176577772377,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0.345369963731791,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0,0,1.81467135269789,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.354680467284547,0,0,0,8.44818149029357,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0.26175594198403,1.03691978633434,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0.986852422704233,1.51096154727671,0,0.375364950902364,6.41030684935428,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0,0,0,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0.57386499620653,0.220591419119515,0.463735671240843|short_description=p2@Aspg}} | ||
|EntrezGene=104816 | |||
|HGNC= | |||
|UniProt=A0JNU3 | |||
|association_with_transcript=108bp_to_ENSMUST00000079400,NM_001081169,uc007pek.1_5end | |||
|description=CAGE_peak_2_at_Aspg_5end | |||
|id=chr12:113345002..113345021,+ | |||
|ontology_enrichment_celltype=CL:0002453!1.88e-07!8;CL:0000333!2.57e-07!10;CL:0000095!2.57e-07!10;CL:0000243!2.57e-07!10;CL:0000123!2.57e-07!10;CL:0000125!2.57e-07!10;CL:0000030!2.57e-07!10;CL:0000339!2.57e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.22e-10,5;CL:0000151,2.26e-10,3;CL:0000499,2.26e-10,3;CL:0000327,2.26e-10,3;CL:0002453,2.28e-09,8;CL:0000128,1.57e-08,6;CL:0000126,1.57e-08,6;CL:0000127,1.57e-08,6;CL:0000708,1.66e-07,2;CL:0000333,1.96e-07,10;CL:0000095,1.96e-07,10;CL:0000243,1.96e-07,10;CL:0000123,1.96e-07,10;CL:0000125,1.96e-07,10;CL:0000030,1.96e-07,10;CL:0000339,1.96e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.03e-10,22;UBERON:0007499,3.03e-10,22;UBERON:0006925,3.03e-10,22;UBERON:0009497,3.03e-10,22;UBERON:0000015,3.03e-10,22;UBERON:0002423,3.03e-10,22;UBERON:0006235,3.03e-10,22;UBERON:0008835,3.03e-10,22;UBERON:0003894,3.03e-10,22;UBERON:0004161,3.03e-10,22;UBERON:0008836,3.03e-10,22;UBERON:0009854,9.92e-10,23;UBERON:0009856,9.92e-10,23;UBERON:0002365,7.99e-09,25;UBERON:0002330,7.99e-09,25;UBERON:0003210,1.66e-07,2 | |||
|phase1_expression=0,0.697950815278722,1.36499771816861,0.30246421130683,0,0.839396359559449,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,1.43993180514066,0.68822784320151,0,0.430761996159075,1.50829862880122,0.380046838912748,0.504060259519861,0.665191531965914,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5182615095686,0.65407546914134,0.439372365468944,1.1665793944457,8.81914456239784,1.43752564364972,0,0,0,0.257259436035947,0.85960031981627,0,0,0,0,2.37191172448392,9.78224275722253,0,0,0,0.898800331555214,1.15265491596466,0,0,0,0,0,0,0,0,1.10115880999389,0,0.153606533256243,0,0,0,0.279182999001381,0.56276261003168,0.61119299110724,0,0,0,0.075726193333184,0.0755715601067855,0.289864488701678,5.16254326188832,4.75979933595425,7.55584468292944,5.19821133958135,5.82434953226536,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0.148442139064825,0,0,0,0,0.117588707135705,1.0053327306374,0.247194967734374,0.578397427679647,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0,0,0.124406970610093,1.26361379216837,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,0,0,0,0,0.213288250535234,0.464473343720877,0.77320476793256,2.01683524623343,1.11189021922435,0.380451252225118,0.474529061544512,0.494096864172033,0.251335208800269,0.198956472041151,0.974820435595601,0,0,0.398282546508734,0,0.228497025219458,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0.590440591918409,0.31399745568275,0.740382983530803,2.37162101669719,0,0,0,0,0,0,0.287696137450811,0.648540907100142,0.823684239564244,0,0.372140947668503,0.312037673114561,1.76805214562978,3.94674309748207,6.27176577772377,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0.345369963731791,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0,0,1.81467135269789,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.354680467284547,0,0,0,8.44818149029357,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0.26175594198403,1.03691978633434,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0.986852422704233,1.51096154727671,0,0.375364950902364,6.41030684935428,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0,0,0,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0.57386499620653,0.220591419119515,0.463735671240843 | |||
|short_description=p2@Aspg | |||
}} |
Revision as of 22:21, 12 September 2013
Short description: | p2@Aspg |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Aspg_5end |
Coexpression cluster: | NA |
Association with transcript: | 108bp_to_ENSMUST00000079400, NM_001081169, uc007pek.1_5end |
EntrezGene: | Aspg |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.22e-10 | 5 |
secretory cell | 2.26e-10 | 3 |
stromal cell | 2.26e-10 | 3 |
extracellular matrix secreting cell | 2.26e-10 | 3 |
oligodendrocyte precursor cell | 2.28e-09 | 8 |
oligodendrocyte | 1.57e-08 | 6 |
macroglial cell | 1.57e-08 | 6 |
astrocyte | 1.57e-08 | 6 |
leptomeningeal cell | 1.66e-07 | 2 |
migratory neural crest cell | 1.96e-07 | 10 |
neuron associated cell | 1.96e-07 | 10 |
glial cell (sensu Vertebrata) | 1.96e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 1.96e-07 | 10 |
glial cell | 1.96e-07 | 10 |
glioblast | 1.96e-07 | 10 |
glioblast (sensu Vertebrata) | 1.96e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
liver | 3.03e-10 | 22 |
epithelial sac | 3.03e-10 | 22 |
digestive gland | 3.03e-10 | 22 |
epithelium of foregut-midgut junction | 3.03e-10 | 22 |
anatomical boundary | 3.03e-10 | 22 |
hepatobiliary system | 3.03e-10 | 22 |
foregut-midgut junction | 3.03e-10 | 22 |
hepatic diverticulum | 3.03e-10 | 22 |
liver primordium | 3.03e-10 | 22 |
septum transversum | 3.03e-10 | 22 |
liver bud | 3.03e-10 | 22 |
digestive tract diverticulum | 9.92e-10 | 23 |
sac | 9.92e-10 | 23 |
exocrine gland | 7.99e-09 | 25 |
exocrine system | 7.99e-09 | 25 |
blood-cerebrospinal fluid barrier | 1.66e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.