FFCP PHASE1:Mm9::chr4:155424607..155424615,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=117|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:155424607..155424615,-|id=chr4:155424607..155424615,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!6.38e-17!18;UBERON:0005564!6.38e-17!18;UBERON:0004176!3.60e-14!17;UBERON:0009196!3.60e-14!17;UBERON:0009117!3.60e-14!17;UBERON:0005156!7.48e-14!26;UBERON:0000990!7.48e-14!26;UBERON:0000992!1.64e-13!3;UBERON:0003133!2.44e-12!24;UBERON:0000464!1.47e-09!57;UBERON:0000474!1.57e-07!9;UBERON:0002323!1.66e-07!37;UBERON:0004458!1.66e-07!37;UBERON:0003886!2.85e-07!38;UBERON:0002553!4.76e-07!39;UBERON:0000473!8.29e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0000992,3.28e-58,3;UBERON:0003134,8.41e-23,8;UBERON:0000474,1.98e-20,9;UBERON:0003100,5.67e-17,11;UBERON:0004176,1.86e-11,17;UBERON:0009196,1.86e-11,17;UBERON:0009117,1.86e-11,17;UBERON:0000991,6.81e-11,18;UBERON:0005564,6.81e-11,18;UBERON:0003133,1.75e-08,24;UBERON:0005156,6.33e-08,26;UBERON:0000990,6.33e-08,26|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0.251333182659351,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0,0,0,0,0.163863314715738,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82596289708113,1.78065603667255,0.488660878060728,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0.234714477291508,0,0.314578033277133,0,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr4:155424607..155424615,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=117 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:155424607..155424615,- | |||
|id=chr4:155424607..155424615,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!6.38e-17!18;UBERON:0005564!6.38e-17!18;UBERON:0004176!3.60e-14!17;UBERON:0009196!3.60e-14!17;UBERON:0009117!3.60e-14!17;UBERON:0005156!7.48e-14!26;UBERON:0000990!7.48e-14!26;UBERON:0000992!1.64e-13!3;UBERON:0003133!2.44e-12!24;UBERON:0000464!1.47e-09!57;UBERON:0000474!1.57e-07!9;UBERON:0002323!1.66e-07!37;UBERON:0004458!1.66e-07!37;UBERON:0003886!2.85e-07!38;UBERON:0002553!4.76e-07!39;UBERON:0000473!8.29e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,3.28e-58,3;UBERON:0003134,8.41e-23,8;UBERON:0000474,1.98e-20,9;UBERON:0003100,5.67e-17,11;UBERON:0004176,1.86e-11,17;UBERON:0009196,1.86e-11,17;UBERON:0009117,1.86e-11,17;UBERON:0000991,6.81e-11,18;UBERON:0005564,6.81e-11,18;UBERON:0003133,1.75e-08,24;UBERON:0005156,6.33e-08,26;UBERON:0000990,6.33e-08,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0.251333182659351,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0,0,0,0,0.163863314715738,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82596289708113,1.78065603667255,0.488660878060728,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0.234714477291508,0,0.314578033277133,0,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr4:155424607..155424615,- | |||
}} |
Revision as of 04:44, 14 September 2013
Short description: | p@chr4:155424607..155424615, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:155424607..155424615, - |
Coexpression cluster: | MCL_coexpression_mm9:117 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
female gonad | 3.28e-58 | 3 |
female reproductive organ | 8.41e-23 | 8 |
female reproductive system | 1.98e-20 | 9 |
female organism | 5.67e-17 | 11 |
external genitalia | 1.86e-11 | 17 |
indifferent external genitalia | 1.86e-11 | 17 |
indifferent gonad | 1.86e-11 | 17 |
gonad | 6.81e-11 | 18 |
gonad primordium | 6.81e-11 | 18 |
reproductive organ | 1.75e-08 | 24 |
reproductive structure | 6.33e-08 | 26 |
reproductive system | 6.33e-08 | 26 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.