FFCP PHASE1:Mm9::chr2:131014815..131014832,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=261|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:131014815..131014832,+|id=chr2:131014815..131014832,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002027,1.04e-13,3;CL:0002006,1.04e-13,3;CL:0002024,1.04e-13,3;CL:0000553,2.54e-07,6;CL:0000556,2.54e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.70e-11,22;UBERON:0007499,2.70e-11,22;UBERON:0006925,2.70e-11,22;UBERON:0009497,2.70e-11,22;UBERON:0000015,2.70e-11,22;UBERON:0002423,2.70e-11,22;UBERON:0006235,2.70e-11,22;UBERON:0008835,2.70e-11,22;UBERON:0003894,2.70e-11,22;UBERON:0004161,2.70e-11,22;UBERON:0008836,2.70e-11,22;UBERON:0009854,8.25e-11,23;UBERON:0009856,8.25e-11,23;UBERON:0002365,5.89e-10,25;UBERON:0002330,5.89e-10,25;UBERON:0005172,1.17e-09,49;UBERON:0005173,1.17e-09,49;UBERON:0002417,1.17e-09,49;UBERON:0000916,1.17e-09,49;UBERON:0002106,1.63e-07,6;UBERON:0004457,1.63e-07,6;UBERON:0000042,1.63e-07,6;UBERON:0004854,1.63e-07,6;UBERON:0009034,1.63e-07,6;UBERON:0002095,1.63e-07,6;UBERON:0004782,1.63e-07,6;UBERON:0003281,1.63e-07,6;UBERON:0009664,1.63e-07,6;UBERON:0002296,1.63e-07,6;UBERON:0005602,1.63e-07,6;UBERON:0001179,1.63e-07,6;UBERON:0006293,1.63e-07,6;UBERON:0009569,4.17e-07,66|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0.333109761815663,1.01237633694913,1.39912375625629,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0.577703239502549,0,0,0.418531630736908,0,0.523523743973798,0,0,0,0.125896817975577,0.202753862439029,0,0.782391344348039,0,0,0,0.279972843250725,0,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.210324961351382,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0.255457055208591,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0.203678727700633,0.497627882440372,0,0,0.130120442962704,0,0,0,0.136072998302656,0,0.0937017245597288,0,0.431135985865684,0,0,0,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0,0.257734922644187,0,0,0.190225626112559,0,0,0.502670417600539,0,0.19496408711912,0,0.216138049874694,0,0.948339504765408,0,0,0,0,0,0,0,0,0,0,0.667380422864376,0.589676985339609,1.34917267430912,0.405720242777006,1.4470629585145,1.78238096246994,1.15078454980324,5.0261920300261,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0.327869890753351,0,0,0,0.430846795465598,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0,0,0,0.238744688006273,0.164140899745061,0.582961673259701,0,1.87957968877638,0.206386867963223,0.370389054739423,0.565105371014073,0.820165366326151,1.37266903923914,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0.149516546043979,0.330916980914195,0,0.258319646955462,0,0.117357238645754,0.13020438484395,0.209718688851422,0,0,0.632022241256357,0.202725215290164,0.205421914329655,0.25984164595559,0.179026695667481,0,0,0,0.201932899896295,0.0762068066549998,0,0.194915761479505,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0.187283014939765,0,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0.561142271657738,0,0,0,0.154936841185966,0,0,0,0.429742108096597,0,0.441182838239031,0|short_description=p@chr2:131014815..131014832,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=261 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:131014815..131014832,+ | |||
|id=chr2:131014815..131014832,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,1.04e-13,3;CL:0002006,1.04e-13,3;CL:0002024,1.04e-13,3;CL:0000553,2.54e-07,6;CL:0000556,2.54e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.70e-11,22;UBERON:0007499,2.70e-11,22;UBERON:0006925,2.70e-11,22;UBERON:0009497,2.70e-11,22;UBERON:0000015,2.70e-11,22;UBERON:0002423,2.70e-11,22;UBERON:0006235,2.70e-11,22;UBERON:0008835,2.70e-11,22;UBERON:0003894,2.70e-11,22;UBERON:0004161,2.70e-11,22;UBERON:0008836,2.70e-11,22;UBERON:0009854,8.25e-11,23;UBERON:0009856,8.25e-11,23;UBERON:0002365,5.89e-10,25;UBERON:0002330,5.89e-10,25;UBERON:0005172,1.17e-09,49;UBERON:0005173,1.17e-09,49;UBERON:0002417,1.17e-09,49;UBERON:0000916,1.17e-09,49;UBERON:0002106,1.63e-07,6;UBERON:0004457,1.63e-07,6;UBERON:0000042,1.63e-07,6;UBERON:0004854,1.63e-07,6;UBERON:0009034,1.63e-07,6;UBERON:0002095,1.63e-07,6;UBERON:0004782,1.63e-07,6;UBERON:0003281,1.63e-07,6;UBERON:0009664,1.63e-07,6;UBERON:0002296,1.63e-07,6;UBERON:0005602,1.63e-07,6;UBERON:0001179,1.63e-07,6;UBERON:0006293,1.63e-07,6;UBERON:0009569,4.17e-07,66 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0.333109761815663,1.01237633694913,1.39912375625629,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0.577703239502549,0,0,0.418531630736908,0,0.523523743973798,0,0,0,0.125896817975577,0.202753862439029,0,0.782391344348039,0,0,0,0.279972843250725,0,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.210324961351382,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0.255457055208591,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0.203678727700633,0.497627882440372,0,0,0.130120442962704,0,0,0,0.136072998302656,0,0.0937017245597288,0,0.431135985865684,0,0,0,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0,0.257734922644187,0,0,0.190225626112559,0,0,0.502670417600539,0,0.19496408711912,0,0.216138049874694,0,0.948339504765408,0,0,0,0,0,0,0,0,0,0,0.667380422864376,0.589676985339609,1.34917267430912,0.405720242777006,1.4470629585145,1.78238096246994,1.15078454980324,5.0261920300261,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0.327869890753351,0,0,0,0.430846795465598,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0,0,0,0.238744688006273,0.164140899745061,0.582961673259701,0,1.87957968877638,0.206386867963223,0.370389054739423,0.565105371014073,0.820165366326151,1.37266903923914,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0.149516546043979,0.330916980914195,0,0.258319646955462,0,0.117357238645754,0.13020438484395,0.209718688851422,0,0,0.632022241256357,0.202725215290164,0.205421914329655,0.25984164595559,0.179026695667481,0,0,0,0.201932899896295,0.0762068066549998,0,0.194915761479505,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0.187283014939765,0,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0.561142271657738,0,0,0,0.154936841185966,0,0,0,0.429742108096597,0,0.441182838239031,0 | |||
|short_description=p@chr2:131014815..131014832,+ | |||
}} |
Revision as of 22:06, 13 September 2013
Short description: | p@chr2:131014815..131014832, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:131014815..131014832, + |
Coexpression cluster: | MCL_coexpression_mm9:261 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 1.04e-13 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.04e-13 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.04e-13 | 3 |
megakaryocyte progenitor cell | 2.54e-07 | 6 |
megakaryocyte | 2.54e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
liver | 2.70e-11 | 22 |
epithelial sac | 2.70e-11 | 22 |
digestive gland | 2.70e-11 | 22 |
epithelium of foregut-midgut junction | 2.70e-11 | 22 |
anatomical boundary | 2.70e-11 | 22 |
hepatobiliary system | 2.70e-11 | 22 |
foregut-midgut junction | 2.70e-11 | 22 |
hepatic diverticulum | 2.70e-11 | 22 |
liver primordium | 2.70e-11 | 22 |
septum transversum | 2.70e-11 | 22 |
liver bud | 2.70e-11 | 22 |
digestive tract diverticulum | 8.25e-11 | 23 |
sac | 8.25e-11 | 23 |
exocrine gland | 5.89e-10 | 25 |
exocrine system | 5.89e-10 | 25 |
abdomen element | 1.17e-09 | 49 |
abdominal segment element | 1.17e-09 | 49 |
abdominal segment of trunk | 1.17e-09 | 49 |
abdomen | 1.17e-09 | 49 |
spleen | 1.63e-07 | 6 |
cavity lining | 1.63e-07 | 6 |
serous membrane | 1.63e-07 | 6 |
gastrointestinal system mesentery | 1.63e-07 | 6 |
stomach region | 1.63e-07 | 6 |
mesentery | 1.63e-07 | 6 |
gastrointestinal system serosa | 1.63e-07 | 6 |
mesentery of stomach | 1.63e-07 | 6 |
gut mesentery | 1.63e-07 | 6 |
dorsal mesentery | 1.63e-07 | 6 |
dorsal mesogastrium | 1.63e-07 | 6 |
peritoneal cavity | 1.63e-07 | 6 |
spleen primordium | 1.63e-07 | 6 |
subdivision of trunk | 4.17e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.