FFCP PHASE1:Mm9::chr6:116666755..116666788,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=319776|HGNC=|MCL_coexpression_id=11|UniProt=Q8C3K5|association_with_transcript=0bp_to_NM_178768,uc009dkr.1_5end|description=CAGE_peak_1_at_Tmem72_5end|id=chr6:116666755..116666788,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!1.86e-13!14;UBERON:0003918!1.86e-13!14;UBERON:0005095!1.86e-13!14;UBERON:0007687!1.86e-13!14;UBERON:0006554!2.68e-11!16;UBERON:0001008!2.05e-10!17;UBERON:0000489!4.74e-09!21|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.58e-33,14;UBERON:0003918,2.58e-33,14;UBERON:0011143,2.58e-33,14;UBERON:0005095,2.58e-33,14;UBERON:0007687,2.58e-33,14;UBERON:0006554,1.32e-25,18;UBERON:0001008,3.48e-24,19;UBERON:0000489,9.55e-22,21;UBERON:0005172,2.98e-10,49;UBERON:0005173,2.98e-10,49;UBERON:0002417,2.98e-10,49;UBERON:0000916,2.98e-10,49;UBERON:0003103,7.28e-10,43;UBERON:0005177,3.32e-08,79;UBERON:0003104,6.78e-08,61;UBERON:0009142,6.78e-08,61;UBERON:0009569,3.64e-07,66;UBERON:0002100,6.08e-07,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.26971862646661,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0.294628585473668,0,0,0,0,1.15945795480671,0,0,0,0,0,3.37066608316204,0,0,0,0,0,0,0,0,0,0,7.4219521817389,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,1.42575109390443,0.124406970610093,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0.150704817835715,0.204109497453984,0,0.281105173679186,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.205809224758569,0.330418782983798,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0.758671603812327,2.51346727741403,10.1436962105772,8.96065842519383,14.5464365375719,21.2511534267665,43.000845244495,74.1002942857603,79.9123524712598,65.2770997146325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358794827043824,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0.604647113929502,0.565815239267694,0.590603785761546,0.307435147943927,0.258428293168221,0,0,1.8962205476149,0,3.09406629744561,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.412070114477788,0.962757628775446,0,0,0.754505365544305,0.655490552289177,0.832326981263301,0.402048282689293,0,0.115884325944855,0.77163688185482,0,0.588795680537589,1.02860775715625,0.354951612318675,0.238436189947321,0.290692833264657,0.658765662907314,0.423073039458382,0.548783918618318,1.05227884575137,0.543216455383447,0,0.355905054372522,0.394017929502254,0,0.154936841185966,0.771626443924566,0.499621155875892,1.16965804222704,0.644613162144895,0,0,0|short_description=p1@Tmem72}} | ||
|EntrezGene=319776 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|UniProt=Q8C3K5 | |||
|association_with_transcript=0bp_to_NM_178768,uc009dkr.1_5end | |||
|description=CAGE_peak_1_at_Tmem72_5end | |||
|id=chr6:116666755..116666788,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!1.86e-13!14;UBERON:0003918!1.86e-13!14;UBERON:0005095!1.86e-13!14;UBERON:0007687!1.86e-13!14;UBERON:0006554!2.68e-11!16;UBERON:0001008!2.05e-10!17;UBERON:0000489!4.74e-09!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.58e-33,14;UBERON:0003918,2.58e-33,14;UBERON:0011143,2.58e-33,14;UBERON:0005095,2.58e-33,14;UBERON:0007687,2.58e-33,14;UBERON:0006554,1.32e-25,18;UBERON:0001008,3.48e-24,19;UBERON:0000489,9.55e-22,21;UBERON:0005172,2.98e-10,49;UBERON:0005173,2.98e-10,49;UBERON:0002417,2.98e-10,49;UBERON:0000916,2.98e-10,49;UBERON:0003103,7.28e-10,43;UBERON:0005177,3.32e-08,79;UBERON:0003104,6.78e-08,61;UBERON:0009142,6.78e-08,61;UBERON:0009569,3.64e-07,66;UBERON:0002100,6.08e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.26971862646661,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0.294628585473668,0,0,0,0,1.15945795480671,0,0,0,0,0,3.37066608316204,0,0,0,0,0,0,0,0,0,0,7.4219521817389,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,1.42575109390443,0.124406970610093,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0.150704817835715,0.204109497453984,0,0.281105173679186,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.205809224758569,0.330418782983798,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0.758671603812327,2.51346727741403,10.1436962105772,8.96065842519383,14.5464365375719,21.2511534267665,43.000845244495,74.1002942857603,79.9123524712598,65.2770997146325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358794827043824,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0.604647113929502,0.565815239267694,0.590603785761546,0.307435147943927,0.258428293168221,0,0,1.8962205476149,0,3.09406629744561,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.412070114477788,0.962757628775446,0,0,0.754505365544305,0.655490552289177,0.832326981263301,0.402048282689293,0,0.115884325944855,0.77163688185482,0,0.588795680537589,1.02860775715625,0.354951612318675,0.238436189947321,0.290692833264657,0.658765662907314,0.423073039458382,0.548783918618318,1.05227884575137,0.543216455383447,0,0.355905054372522,0.394017929502254,0,0.154936841185966,0.771626443924566,0.499621155875892,1.16965804222704,0.644613162144895,0,0,0 | |||
|short_description=p1@Tmem72 | |||
}} |
Revision as of 08:37, 14 September 2013
Short description: | p1@Tmem72 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmem72_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | 0bp_to_NM_178768, uc009dkr.1_5end |
EntrezGene: | Tmem72 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 2.58e-33 | 14 |
kidney mesenchyme | 2.58e-33 | 14 |
upper urinary tract | 2.58e-33 | 14 |
kidney rudiment | 2.58e-33 | 14 |
kidney field | 2.58e-33 | 14 |
urinary system structure | 1.32e-25 | 18 |
renal system | 3.48e-24 | 19 |
cavitated compound organ | 9.55e-22 | 21 |
abdomen element | 2.98e-10 | 49 |
abdominal segment element | 2.98e-10 | 49 |
abdominal segment of trunk | 2.98e-10 | 49 |
abdomen | 2.98e-10 | 49 |
compound organ | 7.28e-10 | 43 |
trunk region element | 3.32e-08 | 79 |
mesenchyme | 6.78e-08 | 61 |
entire embryonic mesenchyme | 6.78e-08 | 61 |
subdivision of trunk | 3.64e-07 | 66 |
trunk | 6.08e-07 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.