FFCP PHASE1:Mm9::chr6:126711807..126711820,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=107|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:126711807..126711820,+|id=chr6:126711807..126711820,+|ontology_enrichment_celltype=CL:0000107!9.33e-09!9|ontology_enrichment_celltype_v019_2=CL:0000107,2.17e-23,9;CL:0000540,8.01e-09,33;CL:0000047,8.01e-09,33;CL:0000031,8.01e-09,33;CL:0000404,8.01e-09,33;CL:0000221,2.07e-08,44;CL:0000133,2.07e-08,44;CL:0002319,2.54e-07,43;CL:0000393,4.56e-07,39;CL:0000211,4.56e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!3.26e-09!11;UBERON:0002410!9.33e-09!9|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.17e-23,9;UBERON:0000010,6.69e-23,11;UBERON:0001016,3.57e-10,75;UBERON:0004121,5.68e-10,95;UBERON:0000924,5.68e-10,95;UBERON:0006601,5.68e-10,95;UBERON:0001017,2.00e-09,73;UBERON:0000011,3.55e-09,3;UBERON:0000013,7.19e-09,3;UBERON:0010313,1.52e-08,3;UBERON:0002342,1.52e-08,3;UBERON:0002005,1.52e-08,3;UBERON:0005428,1.52e-08,3;UBERON:0005062,1.52e-08,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0,0,0,1.10115880999389,0.510749352340751,0.46081959976873,0,0,0,0.837548997004143,1.12552522006336,0.916789486660861,0.589257170947335,1.28134512719193,0.186399445825301,0.227178579999552,1.51143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,5.21120653173718,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.593768556259299,0,0.304465478312141,0.691846491768175,0.904335843315735,0.587943535678524,0.251333182659351,0,1.3013942122792,0,0.485300549842228,0.441683036920787,0,0,0.585561594023094,0.209446706813455,0.255457055208591,0,0,0,2.84602214869163,6.40500843946077,0,2.25971616249959,0.255715457330331,4.77912502486988,0.324482526135515,0,0.124406970610093,0,0.841767423545896,0,0,0.180062129805349,0.150704817835715,0.204109497453984,0.12811372028485,0.281105173679186,1.81092359517311,0,0.189106080167819,0.175951124163949,0.219195732427575,1.11218899690239,0.348252166522167,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0.164167464079095,0.648550476366846,0.730999937126662,0.878200461164203,1.20785776884335,2.73376933133365,0,0,0.264450566663544,0.426576501070468,0,0.128867461322093,0.605050573870028,0.444756087689741,0.190225626112559,0,0,0.502670417600539,0,0.779856348476481,0,0,0.398282546508734,0,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0.189491411770485,0,0,0,0,0.476087281772027,0,0.157635144106191,0,0.637819074629948,0.655453258862952,1.03610989119537,0.144649058581512,0,0,0,0,5.61927064957272,0.937693492737625,0,1.00988370881749,3.78609863299508,3.12350995437311,11.8482868753039,20.3123478259669,24.7306528231457,19.8153571552183,8.09621403349789,9.35218745316198,11.4633455604492,0.963963949265421,0.141940085208269,0.35613120733451,0.162886959353576,0.494910368917606,1.32745138339963,0,0,0.188605079755898,0.590603785761546,0.614870295887855,0.258428293168221,0,0.712994756769443,0.632073515871632,0,1.03135543248187,0,0,0,0,0,0,0.493647061806363,0,0,0,2.20528398054962,0.8244312647074,0.645857706783622,0.482503399425247,0.238744688006273,0.328281799490123,0,4.82105785227325,0,0,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.216010681643603,0.418176592028937,1.74690050996942,0.674321731924103,0.991841468704031,1.30877970992015,0.648074866458964,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,1.81384306892169,0,0,0,2.89784391048286,0,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,1.03552062350364,0.103787347584177,0,0.682934423016537,0,0,0.183843508450014,0.666740183404846,0.206035057238894,0.320919209591815,0.758091635291392,1.01391719956096,0.943131706930381,0.187283014939765,0.768301828858431,0.574354689556133,0,0.231768651889711,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,1.06485483695602,0.476872379894642,0.436039249896986,0.282328141245992,0.338458431566706,0.73171189149109,1.05227884575137,0.407412341537585,0.561142271657738,0.355905054372522,0.788035859004508,0.409231043169689,0.464810523557898,0,0.249810577937946,0.467863216890817,0.429742108096597,0.57386499620653,0.661774257358546,0.695603506861264|short_description=p@chr6:126711807..126711820,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=107 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:126711807..126711820,+ | |||
|id=chr6:126711807..126711820,+ | |||
|ontology_enrichment_celltype=CL:0000107!9.33e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,2.17e-23,9;CL:0000540,8.01e-09,33;CL:0000047,8.01e-09,33;CL:0000031,8.01e-09,33;CL:0000404,8.01e-09,33;CL:0000221,2.07e-08,44;CL:0000133,2.07e-08,44;CL:0002319,2.54e-07,43;CL:0000393,4.56e-07,39;CL:0000211,4.56e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!3.26e-09!11;UBERON:0002410!9.33e-09!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.17e-23,9;UBERON:0000010,6.69e-23,11;UBERON:0001016,3.57e-10,75;UBERON:0004121,5.68e-10,95;UBERON:0000924,5.68e-10,95;UBERON:0006601,5.68e-10,95;UBERON:0001017,2.00e-09,73;UBERON:0000011,3.55e-09,3;UBERON:0000013,7.19e-09,3;UBERON:0010313,1.52e-08,3;UBERON:0002342,1.52e-08,3;UBERON:0002005,1.52e-08,3;UBERON:0005428,1.52e-08,3;UBERON:0005062,1.52e-08,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0,0,0,1.10115880999389,0.510749352340751,0.46081959976873,0,0,0,0.837548997004143,1.12552522006336,0.916789486660861,0.589257170947335,1.28134512719193,0.186399445825301,0.227178579999552,1.51143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,5.21120653173718,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.593768556259299,0,0.304465478312141,0.691846491768175,0.904335843315735,0.587943535678524,0.251333182659351,0,1.3013942122792,0,0.485300549842228,0.441683036920787,0,0,0.585561594023094,0.209446706813455,0.255457055208591,0,0,0,2.84602214869163,6.40500843946077,0,2.25971616249959,0.255715457330331,4.77912502486988,0.324482526135515,0,0.124406970610093,0,0.841767423545896,0,0,0.180062129805349,0.150704817835715,0.204109497453984,0.12811372028485,0.281105173679186,1.81092359517311,0,0.189106080167819,0.175951124163949,0.219195732427575,1.11218899690239,0.348252166522167,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0.164167464079095,0.648550476366846,0.730999937126662,0.878200461164203,1.20785776884335,2.73376933133365,0,0,0.264450566663544,0.426576501070468,0,0.128867461322093,0.605050573870028,0.444756087689741,0.190225626112559,0,0,0.502670417600539,0,0.779856348476481,0,0,0.398282546508734,0,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0.189491411770485,0,0,0,0,0.476087281772027,0,0.157635144106191,0,0.637819074629948,0.655453258862952,1.03610989119537,0.144649058581512,0,0,0,0,5.61927064957272,0.937693492737625,0,1.00988370881749,3.78609863299508,3.12350995437311,11.8482868753039,20.3123478259669,24.7306528231457,19.8153571552183,8.09621403349789,9.35218745316198,11.4633455604492,0.963963949265421,0.141940085208269,0.35613120733451,0.162886959353576,0.494910368917606,1.32745138339963,0,0,0.188605079755898,0.590603785761546,0.614870295887855,0.258428293168221,0,0.712994756769443,0.632073515871632,0,1.03135543248187,0,0,0,0,0,0,0.493647061806363,0,0,0,2.20528398054962,0.8244312647074,0.645857706783622,0.482503399425247,0.238744688006273,0.328281799490123,0,4.82105785227325,0,0,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.216010681643603,0.418176592028937,1.74690050996942,0.674321731924103,0.991841468704031,1.30877970992015,0.648074866458964,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,1.81384306892169,0,0,0,2.89784391048286,0,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,1.03552062350364,0.103787347584177,0,0.682934423016537,0,0,0.183843508450014,0.666740183404846,0.206035057238894,0.320919209591815,0.758091635291392,1.01391719956096,0.943131706930381,0.187283014939765,0.768301828858431,0.574354689556133,0,0.231768651889711,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,1.06485483695602,0.476872379894642,0.436039249896986,0.282328141245992,0.338458431566706,0.73171189149109,1.05227884575137,0.407412341537585,0.561142271657738,0.355905054372522,0.788035859004508,0.409231043169689,0.464810523557898,0,0.249810577937946,0.467863216890817,0.429742108096597,0.57386499620653,0.661774257358546,0.695603506861264 | |||
|short_description=p@chr6:126711807..126711820,+ | |||
}} |
Revision as of 08:58, 14 September 2013
Short description: | p@chr6:126711807..126711820, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:126711807..126711820, + |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 2.17e-23 | 9 |
neuron | 8.01e-09 | 33 |
neuronal stem cell | 8.01e-09 | 33 |
neuroblast | 8.01e-09 | 33 |
electrically signaling cell | 8.01e-09 | 33 |
ectodermal cell | 2.07e-08 | 44 |
neurectodermal cell | 2.07e-08 | 44 |
neural cell | 2.54e-07 | 43 |
electrically responsive cell | 4.56e-07 | 39 |
electrically active cell | 4.56e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 2.17e-23 | 9 |
peripheral nervous system | 6.69e-23 | 11 |
nervous system | 3.57e-10 | 75 |
ectoderm-derived structure | 5.68e-10 | 95 |
ectoderm | 5.68e-10 | 95 |
presumptive ectoderm | 5.68e-10 | 95 |
central nervous system | 2.00e-09 | 73 |
parasympathetic nervous system | 3.55e-09 | 3 |
sympathetic nervous system | 7.19e-09 | 3 |
neural crest-derived structure | 1.52e-08 | 3 |
neural crest | 1.52e-08 | 3 |
enteric nervous system | 1.52e-08 | 3 |
vagal neural crest | 1.52e-08 | 3 |
neural fold | 1.52e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.