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FFCP PHASE1:Mm9::chr3:121426433..121426452,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=14066|HGNC=|MCL_coexpression_id=72|UniProt=P20352,Q8R3Q1|association_with_transcript=-2bp_to_ENSMUST00000029771,NM_010171,uc008ree.2_5end|description=CAGE_peak_2_at_F3_5end|id=chr3:121426433..121426452,+|ontology_enrichment_celltype=CL:0002321!2.39e-08!70;CL:0000220!2.39e-08!70;CL:0000055!1.23e-07!50|ontology_enrichment_celltype_v019_2=CL:0002321,2.84e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.46e-07!73;UBERON:0005743!2.46e-07!73;UBERON:0000073!3.64e-07!75;UBERON:0001016!3.64e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.95e-08,95;UBERON:0000924,4.95e-08,95;UBERON:0006601,4.95e-08,95;UBERON:0001017,2.23e-07,73;UBERON:0001016,3.31e-07,75|phase1_expression=1.28119077683835,1.04692622291808,0.909998478779072,0.60492842261366,3.00537437967808,1.17515490338323,2.10251376535973,0,2.67498572088167,1.63845168425395,0.34243593645101,0.398860794976682,0,0,0,0,0,0,0,0,5.69790044012167,0,0.261199789138935,0.799962113967033,0.68822784320151,0,0.86152399231815,0.646413698057667,0.570070258369122,0.504060259519861,0.665191531965914,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,2.09265815368454,1.5626706890476,1.0470474879476,1.17646297606203,2.73218193983378,0.485510353031154,5.41356317294982,8.71841608487825,9.36088436024576,13.3006528539167,12.4274339136855,8.12838876117546,12.2490836416799,12.738764367908,7.18762821824858,0,0,0,7.71778308107841,6.30373567865265,4.64104883049698,1.41621522601718,1.05798195854407,1.90149421051854,13.2149367506962,12.450127145556,0.449949858640699,0.988866362566974,0,9.28760342607055,11.1423308543251,2.28117147078651,2.02508907497536,2.10324961351382,7.7125765789027,5.52171352379034,1.83736198822431,2.20444583341944,1.83843757322004,1.10115880999389,4.21368215681119,4.45458946443106,2.50583946687368,1.82975287204819,0.52091337055676,5.30447698102624,6.75315132038016,5.04234217663473,3.24091444021034,4.27115042397309,1.1183966749518,1.36307147999731,2.72057616384428,8.11620568364698,0,11.5595126730318,2.69851595818909,1.94932925234301,2.68816132258401,2.52799956237153,7.6693645160126,10.1316541795119,13.4269038313929,1.54927761754349,15.3991772897181,7.64415719119937,7.11066703153331,69.9266062466222,83.6087556067825,74.8176178621879,3.65388415100992,0,1.63286352971307,1.04091196059682,0.608930956624282,0.230615497256059,0.904335843315735,1.52865319276416,4.02133092254962,22.9891319992968,8.53136205827479,0.884610551949874,1.29413479957927,1.10420759230197,0.969750506270444,1.86391761218122,4.09893115816166,3.77004072264219,1.02182822083437,0.838705871541442,0.599902730993408,1.27070227073065,2.99581278809645,2.74500361691176,2.76439574648302,3.12883776346098,2.30143911597297,4.77912502486988,2.92034273521964,5.39748628406676,1.7416975885413,1.26361379216837,14.7309299120532,0.780722657776222,1.60931473103431,1.98068342785884,1.80845781402858,2.04109497453984,0.2562274405697,1.68663104207512,4.39795730256327,0.646703978798527,1.13463648100692,1.58356011747554,1.09597866213787,1.39023624612799,2.43776516565517,3.90986059175093,1.59227413454795,0,0,0,1.24275463521301,1.87620847984877,2.34080679899319,1.65721314909647,0.983821158737019,1.54267112887378,1.86027155800326,2.95100741539581,3.97002164048376,5.10135534731789,4.10418660197738,5.99909190639332,5.84799949701329,4.17145219052996,4.42881181909227,2.94405927989778,1.85228302282712,0,1.05780226665418,1.91959425481711,2.32236671860439,2.31961430379768,4.43703754171354,2.66853652613844,2.66315876557583,0.949058123089023,2.30578536613615,3.2673577144035,1.59165177632921,3.8992817423824,0.898819408654221,4.10662294761919,1.7922714592893,2.27601481143698,2.39921876480431,1.1270773567308,3.05476991767971,2.52138233317913,2.52488951605147,5.94423448968019,3.39503340353085,2.98297582898612,2.83813477020141,2.37162101669719,0,0,0,0.405720242777006,0,0.25462585178142,1.72617682470486,0.324270453550071,0.274561413188081,1.43768206527355,2.60498663367952,1.24815069245824,0.757736633841335,0.358794827043824,0.964887042726734,12.1937105509959,1.13694847062291,1.95557971730431,1.86719594352707,2.58159273117352,7.37027532743989,7.61739650835244,25.7576415172294,6.62067605246002,9.08005227559977,9.72674088810671,6.55453258862952,6.38934432903814,7.66640010482011,0,0,3.44234991113325,2.20749397043786,3.21101179975584,3.28192722458169,10.4918365041072,3.53459298086122,7.2566890465739,5.0757036758563,4.52389135238878,5.4962823529087,6.23836287430704,5.94460714656548,4.85772842009873,6.13737301613755,6.32460444714438,3.53453448063988,5.10984306749767,3.20518086601059,3.4206261464251,13.1976098378028,2.65490276679926,2.42780636154981,2.72091201268276,2.26326095707078,1.77181135728464,3.99665692327106,2.84271122485043,2.90826983582004,2.85197902707777,3.16036757935816,1.05418608574999,3.09406629744561,1.70219802876894,1.98067203434441,2.06973894052407,1.71469628025274,1.41872186913819,1.96205699362278,2.79733335023606,3.04464949114599,4.928105869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|EntrezGene=14066
|HGNC=
|MCL_coexpression_id=72
|UniProt=P20352,Q8R3Q1
|association_with_transcript=-2bp_to_ENSMUST00000029771,NM_010171,uc008ree.2_5end
|description=CAGE_peak_2_at_F3_5end
|id=chr3:121426433..121426452,+
|ontology_enrichment_celltype=CL:0002321!2.39e-08!70;CL:0000220!2.39e-08!70;CL:0000055!1.23e-07!50
|ontology_enrichment_celltype_v019_2=CL:0002321,2.84e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.46e-07!73;UBERON:0005743!2.46e-07!73;UBERON:0000073!3.64e-07!75;UBERON:0001016!3.64e-07!75
|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.95e-08,95;UBERON:0000924,4.95e-08,95;UBERON:0006601,4.95e-08,95;UBERON:0001017,2.23e-07,73;UBERON:0001016,3.31e-07,75
|phase1_expression=1.28119077683835,1.04692622291808,0.909998478779072,0.60492842261366,3.00537437967808,1.17515490338323,2.10251376535973,0,2.67498572088167,1.63845168425395,0.34243593645101,0.398860794976682,0,0,0,0,0,0,0,0,5.69790044012167,0,0.261199789138935,0.799962113967033,0.68822784320151,0,0.86152399231815,0.646413698057667,0.570070258369122,0.504060259519861,0.665191531965914,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,2.09265815368454,1.5626706890476,1.0470474879476,1.17646297606203,2.73218193983378,0.485510353031154,5.41356317294982,8.71841608487825,9.36088436024576,13.3006528539167,12.4274339136855,8.12838876117546,12.2490836416799,12.738764367908,7.18762821824858,0,0,0,7.71778308107841,6.30373567865265,4.64104883049698,1.41621522601718,1.05798195854407,1.90149421051854,13.2149367506962,12.450127145556,0.449949858640699,0.988866362566974,0,9.28760342607055,11.1423308543251,2.28117147078651,2.02508907497536,2.10324961351382,7.7125765789027,5.52171352379034,1.83736198822431,2.20444583341944,1.83843757322004,1.10115880999389,4.21368215681119,4.45458946443106,2.50583946687368,1.82975287204819,0.52091337055676,5.30447698102624,6.75315132038016,5.04234217663473,3.24091444021034,4.27115042397309,1.1183966749518,1.36307147999731,2.72057616384428,8.11620568364698,0,11.5595126730318,2.69851595818909,1.94932925234301,2.68816132258401,2.52799956237153,7.6693645160126,10.1316541795119,13.4269038313929,1.54927761754349,15.3991772897181,7.64415719119937,7.11066703153331,69.9266062466222,83.6087556067825,74.8176178621879,3.65388415100992,0,1.63286352971307,1.04091196059682,0.608930956624282,0.230615497256059,0.904335843315735,1.52865319276416,4.02133092254962,22.9891319992968,8.53136205827479,0.884610551949874,1.29413479957927,1.10420759230197,0.969750506270444,1.86391761218122,4.09893115816166,3.77004072264219,1.02182822083437,0.838705871541442,0.599902730993408,1.27070227073065,2.99581278809645,2.74500361691176,2.76439574648302,3.12883776346098,2.30143911597297,4.77912502486988,2.92034273521964,5.39748628406676,1.7416975885413,1.26361379216837,14.7309299120532,0.780722657776222,1.60931473103431,1.98068342785884,1.80845781402858,2.04109497453984,0.2562274405697,1.68663104207512,4.39795730256327,0.646703978798527,1.13463648100692,1.58356011747554,1.09597866213787,1.39023624612799,2.43776516565517,3.90986059175093,1.59227413454795,0,0,0,1.24275463521301,1.87620847984877,2.34080679899319,1.65721314909647,0.983821158737019,1.54267112887378,1.86027155800326,2.95100741539581,3.97002164048376,5.10135534731789,4.10418660197738,5.99909190639332,5.84799949701329,4.17145219052996,4.42881181909227,2.94405927989778,1.85228302282712,0,1.05780226665418,1.91959425481711,2.32236671860439,2.31961430379768,4.43703754171354,2.66853652613844,2.66315876557583,0.949058123089023,2.30578536613615,3.2673577144035,1.59165177632921,3.8992817423824,0.898819408654221,4.10662294761919,1.7922714592893,2.27601481143698,2.39921876480431,1.1270773567308,3.05476991767971,2.52138233317913,2.52488951605147,5.94423448968019,3.39503340353085,2.98297582898612,2.83813477020141,2.37162101669719,0,0,0,0.405720242777006,0,0.25462585178142,1.72617682470486,0.324270453550071,0.274561413188081,1.43768206527355,2.60498663367952,1.24815069245824,0.757736633841335,0.358794827043824,0.964887042726734,12.1937105509959,1.13694847062291,1.95557971730431,1.86719594352707,2.58159273117352,7.37027532743989,7.61739650835244,25.7576415172294,6.62067605246002,9.08005227559977,9.72674088810671,6.55453258862952,6.38934432903814,7.66640010482011,0,0,3.44234991113325,2.20749397043786,3.21101179975584,3.28192722458169,10.4918365041072,3.53459298086122,7.2566890465739,5.0757036758563,4.52389135238878,5.4962823529087,6.23836287430704,5.94460714656548,4.85772842009873,6.13737301613755,6.32460444714438,3.53453448063988,5.10984306749767,3.20518086601059,3.4206261464251,13.1976098378028,2.65490276679926,2.42780636154981,2.72091201268276,2.26326095707078,1.77181135728464,3.99665692327106,2.84271122485043,2.90826983582004,2.85197902707777,3.16036757935816,1.05418608574999,3.09406629744561,1.70219802876894,1.98067203434441,2.06973894052407,1.71469628025274,1.41872186913819,1.96205699362278,2.79733335023606,3.04464949114599,4.92810586933792,12.2862601101016,1.32317038832977,4.9465875882444,4.68246837418126,6.87567344180977,5.37175548014114,3.77524069413641,0.874442509889552,2.59595422814714,0,0.619160603889667,0.370389054739423,0.376736914009382,0.27338845544205,0,1.69978429993855,1.81936888020755,1.52019971184866,3.81868247206045,0.790839983952838,3.86306987541013,3.88819226958485,2.92723614420256,3.27543845619266,4.72025212346872,3.63675205191478,4.4498510137285,2.85152941241944,0.621339313086926,0.56369293868419,1.49516546043979,1.15820943319968,2.72231663681667,2.0665571756437,2.02747350588934,2.93393096614385,5.208175393758,2.41176492179135,1.44950472495604,2.30424005006292,0,0.608175645870493,1.23253148597793,0.51968329191118,0.358053391334963,0.198681354781265,0.600977247599844,0.738447635872886,0.201932899896295,0.15241361331,0.201652370273681,0.38983152295901,0.0962118416403295,0.116876902181569,7.02864189207155,6.43759264784788,2.78112955489375,3.35769232728157,5.60249822693352,17.8298351678623,19.0477689237956,16.291996810009,1.00314420807073,2.82375921308533,1.38097570952153,2.86447756719698,4.29632955859219,1.37016503954128,2.2661816921691,2.02506750069542,2.2516060161211,4.07828168085784,4.14208249401456,1.03787347584177,0.399024873401031,1.02440163452481,0.486213434136588,1.04806581313991,0.735374033800057,2.22246727801615,2.06035057238894,1.92551525755089,1.76888048234658,1.01391719956096,2.45214243801899,1.77918864192777,2.43295579138503,2.69946704091382,1.90517476513229,1.62238056322798,2.31491064556446,2.47251540481984,1.76638704161277,2.74295401908332,0.532427418478012,2.14592570952589,1.59881058295561,1.97629698872194,2.36920902096694,1.64635175585495,1.8414879800649,2.03706170768793,1.68342681497322,2.84724043498018,2.65962102414021,3.27384834535751,3.87342102964915,2.12197272079256,3.2475375131933,3.50897412668113,1.28922632428979,2.29545998482612,1.10295709559758,2.08681052058379
|short_description=p2@F3
}}

Revision as of 01:22, 14 September 2013

Short description:p2@F3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_F3_5end
Coexpression cluster:MCL_coexpression_mm9:72
Association with transcript: -2bp_to_ENSMUST00000029771, NM_010171, uc008ree.2_5end
EntrezGene:F3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@F3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.67
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.41
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.72
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B39.36
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B713.30
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C212.43
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.13
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C312.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C412.74
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.72
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.30
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C613.21
Mouse Meningeal cells, donor3.CNhs12109.11639-122D112.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C89.29
Mouse Microglia, donor2.CNhs12634.11736-123E811.14
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.83
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D91.36
Mouse Schwann, donor2.CNhs12573.11746-123F92.72
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.12
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C411.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E310.13
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I813.43
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H115.40
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G169.93
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G283.61
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G374.82
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.65
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I34.02
amnion, adult pregnant day17.5.CNhs10488.583-22A822.99
aorta, adult.CNhs10498.46-23H18.53
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A43.00
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D53.13
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.40
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.74
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G414.73
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C62.04
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G81.69
eyeball, neonate N16.CNhs11188.777-19A24.40
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B53.91
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E33.97
heart, neonate N03.CNhs11221.1349-25I25.10
heart, neonate N10.CNhs11118.749-24G14.10
heart, neonate N16.CNhs11209.782-15G16.00
heart, neonate N20.CNhs11127.821-26I65.85
heart, neonate N25.CNhs11196.1351-25D34.17
heart, neonate N30.CNhs11202.1390-42D24.43
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G11.85
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D82.32
intestine, embryo E16.CNhs10585.463-22H44.44
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F72.66
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E92.31
intestine, neonate N06.CNhs11102.688-20B83.27
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A53.90
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E34.11
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F82.40
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C72.52
kidney, neonate N00.CNhs11214.646-21G72.52
kidney, neonate N10.CNhs11206.758-6D55.94
kidney, neonate N20.CNhs11113.832-19I13.40
kidney, neonate N25.CNhs11122.1353-25F32.98
kidney, neonate N30.CNhs11203.1385-42H12.84
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B112.19
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A67.37
lung, embryo E18.CNhs10583.1287-20I67.62
lung, neonate N00.CNhs11224.640-42C625.76
lung, neonate N06.CNhs11212.683-20E56.62
lung, neonate N07.CNhs11111.715-19A39.08
lung, neonate N10.CNhs11219.750-23E69.73
lung, neonate N20.CNhs11109.822-18A46.55
lung, neonate N25.CNhs11119.1359-25C76.39
lung, neonate N30.CNhs11133.1394-42H27.67
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C23.21
medulla oblongata, neonate N30.CNhs11200.1396-42A33.28
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C710.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.52
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.50
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.24
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.94
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.14
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.32
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I75.11
ovary, embryo E18.CNhs11040.505-44H73.21
ovary, neonate N00.CNhs11217.1299-22I43.42
oviduct, adult pregnant day01.CNhs10500.988-6G613.20
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E52.26
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I74.00
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C72.07
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F52.80
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I74.93
placenta, adult pregnant day17.CNhs10464.577-18G312.29
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C34.95
skin, neonate N00.CNhs11124.650-25G44.68
skin, neonate N03.CNhs11215.662-22H36.88
skin, neonate N06.CNhs11097.693-20I55.37
skin, neonate N10.CNhs11108.762-6C43.78
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G83.86
stomach, embryo E16.CNhs11022.459-17D43.89
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C63.28
stomach, neonate N03.CNhs11193.1340-24B84.72
stomach, neonate N07.CNhs11210.718-18A93.64
stomach, neonate N25.CNhs11104.1355-25E44.45
stomach, neonate N30.CNhs11134.1386-42I12.85
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B72.93
testis, neonate N07.CNhs11222.726-26I45.21
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B47.03
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.78
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.36
urinary bladder, adult.CNhs10481.879-12E45.60
uterus, adult pregnant day19.CNhs10497.590-15F517.83
uterus, adult.CNhs10509.92-27E519.05
vagina, adult.CNhs10502.89-27D516.29
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.87
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
embryonic cell2.84e-0870

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure4.95e-0895
ectoderm4.95e-0895
presumptive ectoderm4.95e-0895
central nervous system2.23e-0773
nervous system3.31e-0775







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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