FFCP PHASE1:Mm9::chr18:56721869..56721908,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=110695|HGNC=|MCL_coexpression_id=8|UniProt=E9Q1H3,G3UY72|association_with_transcript=0bp_to_ENSMUST00000170309,ENSMUST00000174704_5end|description=CAGE_peak_1_at_Aldh7a1_5end|id=chr18:56721869..56721908,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000466!1.39e-14!79;UBERON:0005177!3.20e-14!85;UBERON:0002100!1.54e-13!98;UBERON:0002365!2.25e-12!25;UBERON:0002330!2.25e-12!25;UBERON:0005172!4.41e-12!49;UBERON:0005173!4.41e-12!49;UBERON:0002417!4.41e-12!49;UBERON:0000916!4.41e-12!49;UBERON:0002107!5.21e-12!22;UBERON:0007499!5.21e-12!22;UBERON:0006925!5.21e-12!22;UBERON:0009497!5.21e-12!22;UBERON:0000015!5.21e-12!22;UBERON:0002423!5.21e-12!22;UBERON:0006235!5.21e-12!22;UBERON:0008835!5.21e-12!22;UBERON:0003894!5.21e-12!22;UBERON:0004161!5.21e-12!22;UBERON:0008836!5.21e-12!22;UBERON:0000949!8.83e-11!72;UBERON:0003104!1.15e-10!131;UBERON:0009142!1.15e-10!131;UBERON:0001048!1.26e-10!147;UBERON:0009854!1.44e-10!23;UBERON:0009856!1.44e-10!23;UBERON:0009569!2.16e-10!66;UBERON:0005256!6.37e-09!47;UBERON:0000077!1.40e-08!97;UBERON:0001041!4.36e-08!92;UBERON:0000926!6.71e-08!193;UBERON:0004120!6.71e-08!193;UBERON:0006603!6.71e-08!193;UBERON:0000475!6.97e-08!200;UBERON:0001264!1.58e-07!12;UBERON:0003922!1.58e-07!12;UBERON:0002114!1.58e-07!12;UBERON:0003923!1.58e-07!12;UBERON:0003924!1.58e-07!12;UBERON:0003921!1.58e-07!12;UBERON:0002530!2.70e-07!65;UBERON:0002553!4.61e-07!39;UBERON:0002323!7.08e-07!37;UBERON:0004458!7.08e-07!37|ontology_enrichment_uberon_v019_2=UBERON:0005177,7.52e-16,79;UBERON:0002100,1.60e-14,90;UBERON:0002365,2.18e-12,25;UBERON:0002330,2.18e-12,25;UBERON:0005172,4.28e-12,49;UBERON:0005173,4.28e-12,49;UBERON:0002417,4.28e-12,49;UBERON:0000916,4.28e-12,49;UBERON:0002107,5.06e-12,22;UBERON:0007499,5.06e-12,22;UBERON:0006925,5.06e-12,22;UBERON:0009497,5.06e-12,22;UBERON:0000015,5.06e-12,22;UBERON:0002423,5.06e-12,22;UBERON:0006235,5.06e-12,22;UBERON:0008835,5.06e-12,22;UBERON:0003894,5.06e-12,22;UBERON:0004161,5.06e-12,22;UBERON:0008836,5.06e-12,22;UBERON:0000949,8.77e-11,72;UBERON:0003104,1.03e-10,61;UBERON:0009142,1.03e-10,61;UBERON:0009854,1.20e-10,23;UBERON:0009856,1.20e-10,23;UBERON:0009569,2.10e-10,66;UBERON:0005256,1.28e-08,45;UBERON:0001264,1.56e-07,12;UBERON:0002530,2.70e-07,65;UBERON:0002553,4.54e-07,39;UBERON:0002323,6.97e-07,37;UBERON:0004458,6.97e-07,37|phase1_expression=19.3780104996801,0.697950815278722,0.909998478779072,0.30246421130683,0.500895729946347,0.671517087647559,1.40167584357315,1.16210991097419,3.66050677594334,2.80877431586392,0.34243593645101,0.717949430958028,0.684802919724823,0.786783621770977,0.999329285446988,1.01237633694913,0,0.315462165358238,0.959801035240171,0.84877930359606,28.9147186513637,7.14894848646374,1.04479915655574,1.27993938234725,1.60586496747019,0,0.86152399231815,0.861884930743556,1.14014051673824,1.00812051903972,0.221730510655305,0,0,0,0.577703239502549,0.664938581433969,0.204169356262369,0,0,0,0,0,0,20.1434908760924,20.680893968781,17.8040349596831,17.2126095756569,32.4857483006865,35.5891616029844,28.5811951639197,27.8572979034471,44.5632949531412,0.167782606057736,0,2.01656279485478,16.9791227783725,14.6132054368766,17.532851137433,3.03474691289397,8.46385566835253,4.43681982454325,32.5290750786367,34.6824970483344,0.449949858640699,0.988866362566974,2.1314403448383,8.08920298399693,9.22123932771731,7.36196247390191,6.07526722492608,6.73039876324422,11.4260393761521,13.0312439161452,5.63457676388789,5.84657373211242,4.5960939330501,5.50579404996943,4.72443150915195,7.52672012955593,3.29715719325485,2.8361169516747,4.16730696445408,6.42120897703176,9.56696437053856,11.0014738399303,10.0173719061047,10.8202477407318,9.31997229126503,1.06016670666458,3.24957708459178,10.7249860819621,314.054715098206,240.709852132544,401.539174578536,413.257801496718,408.60052103277,84.1262076589194,1.36344258062446,0.259786004602869,0,20.8448261269487,0,0,0,15.3708639117962,13.4280728701802,13.1436355703844,108.474685733107,1.03575153458869,7.86743337043571,17.868988656912,21.9215144384742,19.602317266765,18.0867168663147,18.8141931417128,11.1843266283411,53.6413079983591,4.916378135277,3.5384422077995,6.79420769779119,4.63767188766826,6.30337829075789,0,11.1256702864388,13.823482649688,6.89734049063197,4.55297473122497,3.59941638596045,2.41433431438823,18.7238299256028,12.3525162761029,6.65968066198181,15.2965401769203,15.5986428971502,13.0906468072523,16.8730913590468,20.6733908616142,7.2156042953854,11.8779696463827,6.10281382070775,26.804811250317,25.749035696549,19.4467100189777,19.4409215008072,14.0155188251735,14.7330778327577,13.118241438362,9.05461797586555,14.4430555265004,17.3977593754394,15.6596500505914,20.604398848192,19.7413546950174,9.05455632957633,13.1700567301084,29.6561057559555,0.702213187313235,2.83082697826187,2.27330799516474,20.2983257084792,26.0323926579017,15.1252131627252,16.5721314909647,15.937902771539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| ||
|EntrezGene=110695 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=E9Q1H3,G3UY72 | |||
|association_with_transcript=0bp_to_ENSMUST00000170309,ENSMUST00000174704_5end | |||
|description=CAGE_peak_1_at_Aldh7a1_5end | |||
|id=chr18:56721869..56721908,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!1.39e-14!79;UBERON:0005177!3.20e-14!85;UBERON:0002100!1.54e-13!98;UBERON:0002365!2.25e-12!25;UBERON:0002330!2.25e-12!25;UBERON:0005172!4.41e-12!49;UBERON:0005173!4.41e-12!49;UBERON:0002417!4.41e-12!49;UBERON:0000916!4.41e-12!49;UBERON:0002107!5.21e-12!22;UBERON:0007499!5.21e-12!22;UBERON:0006925!5.21e-12!22;UBERON:0009497!5.21e-12!22;UBERON:0000015!5.21e-12!22;UBERON:0002423!5.21e-12!22;UBERON:0006235!5.21e-12!22;UBERON:0008835!5.21e-12!22;UBERON:0003894!5.21e-12!22;UBERON:0004161!5.21e-12!22;UBERON:0008836!5.21e-12!22;UBERON:0000949!8.83e-11!72;UBERON:0003104!1.15e-10!131;UBERON:0009142!1.15e-10!131;UBERON:0001048!1.26e-10!147;UBERON:0009854!1.44e-10!23;UBERON:0009856!1.44e-10!23;UBERON:0009569!2.16e-10!66;UBERON:0005256!6.37e-09!47;UBERON:0000077!1.40e-08!97;UBERON:0001041!4.36e-08!92;UBERON:0000926!6.71e-08!193;UBERON:0004120!6.71e-08!193;UBERON:0006603!6.71e-08!193;UBERON:0000475!6.97e-08!200;UBERON:0001264!1.58e-07!12;UBERON:0003922!1.58e-07!12;UBERON:0002114!1.58e-07!12;UBERON:0003923!1.58e-07!12;UBERON:0003924!1.58e-07!12;UBERON:0003921!1.58e-07!12;UBERON:0002530!2.70e-07!65;UBERON:0002553!4.61e-07!39;UBERON:0002323!7.08e-07!37;UBERON:0004458!7.08e-07!37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,7.52e-16,79;UBERON:0002100,1.60e-14,90;UBERON:0002365,2.18e-12,25;UBERON:0002330,2.18e-12,25;UBERON:0005172,4.28e-12,49;UBERON:0005173,4.28e-12,49;UBERON:0002417,4.28e-12,49;UBERON:0000916,4.28e-12,49;UBERON:0002107,5.06e-12,22;UBERON:0007499,5.06e-12,22;UBERON:0006925,5.06e-12,22;UBERON:0009497,5.06e-12,22;UBERON:0000015,5.06e-12,22;UBERON:0002423,5.06e-12,22;UBERON:0006235,5.06e-12,22;UBERON:0008835,5.06e-12,22;UBERON:0003894,5.06e-12,22;UBERON:0004161,5.06e-12,22;UBERON:0008836,5.06e-12,22;UBERON:0000949,8.77e-11,72;UBERON:0003104,1.03e-10,61;UBERON:0009142,1.03e-10,61;UBERON:0009854,1.20e-10,23;UBERON:0009856,1.20e-10,23;UBERON:0009569,2.10e-10,66;UBERON:0005256,1.28e-08,45;UBERON:0001264,1.56e-07,12;UBERON:0002530,2.70e-07,65;UBERON:0002553,4.54e-07,39;UBERON:0002323,6.97e-07,37;UBERON:0004458,6.97e-07,37 | |||
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| |||
|short_description=p1@Aldh7a1 | |||
}} |
Revision as of 16:22, 13 September 2013
Short description: | p1@Aldh7a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Aldh7a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000170309, ENSMUST00000174704_5end |
EntrezGene: | Aldh7a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk region element | 7.52e-16 | 79 |
trunk | 1.60e-14 | 90 |
exocrine gland | 2.18e-12 | 25 |
exocrine system | 2.18e-12 | 25 |
abdomen element | 4.28e-12 | 49 |
abdominal segment element | 4.28e-12 | 49 |
abdominal segment of trunk | 4.28e-12 | 49 |
abdomen | 4.28e-12 | 49 |
liver | 5.06e-12 | 22 |
epithelial sac | 5.06e-12 | 22 |
digestive gland | 5.06e-12 | 22 |
epithelium of foregut-midgut junction | 5.06e-12 | 22 |
anatomical boundary | 5.06e-12 | 22 |
hepatobiliary system | 5.06e-12 | 22 |
foregut-midgut junction | 5.06e-12 | 22 |
hepatic diverticulum | 5.06e-12 | 22 |
liver primordium | 5.06e-12 | 22 |
septum transversum | 5.06e-12 | 22 |
liver bud | 5.06e-12 | 22 |
endocrine system | 8.77e-11 | 72 |
mesenchyme | 1.03e-10 | 61 |
entire embryonic mesenchyme | 1.03e-10 | 61 |
digestive tract diverticulum | 1.20e-10 | 23 |
sac | 1.20e-10 | 23 |
subdivision of trunk | 2.10e-10 | 66 |
trunk mesenchyme | 1.28e-08 | 45 |
pancreas | 1.56e-07 | 12 |
gland | 2.70e-07 | 65 |
anatomical cavity | 4.54e-07 | 39 |
body cavity | 6.97e-07 | 37 |
body cavity or lining | 6.97e-07 | 37 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.