FFCP PHASE1:Mm9::chr1:40637337..40637355,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=110895|HGNC=|MCL_coexpression_id=110|UniProt=Q8BUE1|association_with_transcript=265bp_to_ENSMUST00000027233,NM_177084,uc007aul.1_5end|description=CAGE_peak_1_at_Slc9a4_5end|id=chr1:40637337..40637355,+|ontology_enrichment_celltype=CL:0000068!4.89e-07!3;CL:0002202!4.89e-07!3;CL:0000069!4.89e-07!3;CL:0002632!4.89e-07!3;CL:0002368!4.89e-07!3;CL:0000307!4.89e-07!3;CL:0000377!4.89e-07!3|ontology_enrichment_celltype_v019_2=CL:0000068,1.18e-16,3;CL:0002202,1.18e-16,3;CL:0000069,1.18e-16,3;CL:0002632,1.18e-16,3;CL:0002368,1.18e-16,3;CL:0000307,1.18e-16,3;CL:0000377,1.18e-16,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000945!2.14e-09!16;UBERON:0010039!2.14e-09!16;UBERON:0003126!4.89e-07!3;UBERON:0001005!4.89e-07!3;UBERON:0007196!4.89e-07!3;UBERON:0001558!4.89e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000945,6.23e-17,16;UBERON:0010039,6.23e-17,16;UBERON:0003126,1.18e-16,3;UBERON:0001005,1.18e-16,3;UBERON:0007196,1.18e-16,3;UBERON:0001558,1.18e-16,3;UBERON:0001911,2.97e-12,2;UBERON:0000076,2.97e-12,2;UBERON:0005333,2.97e-12,2;UBERON:0008425,2.97e-12,2;UBERON:0005311,2.97e-12,2;UBERON:0001153,3.59e-07,1;UBERON:0001045,3.59e-07,1;UBERON:0005409,6.13e-07,47|phase1_expression=0,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.45881856213434,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,1.73192832808971,1.77351905832569,1.51657333504435,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.3670113461747,0,0.209446706813455,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,1.1270773567308,0,0,0,0.379419222745544,0.147610147979602,0.470996183524124,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7364567366092,5.79467167239938,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,39.1414953386197,0,0.813277868507395,2.37611749807963,7.73626695253534,11.5732158785474,15.3745354878696,17.9357998923979,43.7132423113329,0,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.772758376128762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0.118635018124174,0.197008964751127,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p1@Slc9a4}} | ||
|EntrezGene=110895 | |||
|HGNC= | |||
|MCL_coexpression_id=110 | |||
|UniProt=Q8BUE1 | |||
|association_with_transcript=265bp_to_ENSMUST00000027233,NM_177084,uc007aul.1_5end | |||
|description=CAGE_peak_1_at_Slc9a4_5end | |||
|id=chr1:40637337..40637355,+ | |||
|ontology_enrichment_celltype=CL:0000068!4.89e-07!3;CL:0002202!4.89e-07!3;CL:0000069!4.89e-07!3;CL:0002632!4.89e-07!3;CL:0002368!4.89e-07!3;CL:0000307!4.89e-07!3;CL:0000377!4.89e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.18e-16,3;CL:0002202,1.18e-16,3;CL:0000069,1.18e-16,3;CL:0002632,1.18e-16,3;CL:0002368,1.18e-16,3;CL:0000307,1.18e-16,3;CL:0000377,1.18e-16,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000945!2.14e-09!16;UBERON:0010039!2.14e-09!16;UBERON:0003126!4.89e-07!3;UBERON:0001005!4.89e-07!3;UBERON:0007196!4.89e-07!3;UBERON:0001558!4.89e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,6.23e-17,16;UBERON:0010039,6.23e-17,16;UBERON:0003126,1.18e-16,3;UBERON:0001005,1.18e-16,3;UBERON:0007196,1.18e-16,3;UBERON:0001558,1.18e-16,3;UBERON:0001911,2.97e-12,2;UBERON:0000076,2.97e-12,2;UBERON:0005333,2.97e-12,2;UBERON:0008425,2.97e-12,2;UBERON:0005311,2.97e-12,2;UBERON:0001153,3.59e-07,1;UBERON:0001045,3.59e-07,1;UBERON:0005409,6.13e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.45881856213434,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,1.73192832808971,1.77351905832569,1.51657333504435,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.3670113461747,0,0.209446706813455,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,1.1270773567308,0,0,0,0.379419222745544,0.147610147979602,0.470996183524124,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7364567366092,5.79467167239938,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,39.1414953386197,0,0.813277868507395,2.37611749807963,7.73626695253534,11.5732158785474,15.3745354878696,17.9357998923979,43.7132423113329,0,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.772758376128762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0.118635018124174,0.197008964751127,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p1@Slc9a4 | |||
}} |
Revision as of 20:23, 13 September 2013
Short description: | p1@Slc9a4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc9a4_5end |
Coexpression cluster: | MCL_coexpression_mm9:110 |
Association with transcript: | 265bp_to_ENSMUST00000027233, NM_177084, uc007aul.1_5end |
EntrezGene: | Slc9a4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.18e-16 | 3 |
epithelial cell of tracheobronchial tree | 1.18e-16 | 3 |
branched duct epithelial cell | 1.18e-16 | 3 |
epithelial cell of lower respiratory tract | 1.18e-16 | 3 |
respiratory epithelial cell | 1.18e-16 | 3 |
tracheal epithelial cell | 1.18e-16 | 3 |
tracheoblast | 1.18e-16 | 3 |
Ontology term | p-value | n |
---|---|---|
stomach | 6.23e-17 | 16 |
food storage organ | 6.23e-17 | 16 |
trachea | 1.18e-16 | 3 |
respiratory airway | 1.18e-16 | 3 |
tracheobronchial tree | 1.18e-16 | 3 |
lower respiratory tract | 1.18e-16 | 3 |
mammary gland | 2.97e-12 | 2 |
external ectoderm | 2.97e-12 | 2 |
mammary bud | 2.97e-12 | 2 |
mammary ridge | 2.97e-12 | 2 |
mammary placode | 2.97e-12 | 2 |
caecum | 3.59e-07 | 1 |
midgut | 3.59e-07 | 1 |
gastrointestinal system | 6.13e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.