FFCP PHASE1:Mm9::chr7:137789006..137789017,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:137789006..137789017,+|id=chr7:137789006..137789017,+|ontology_enrichment_celltype=CL:0002076!2.34e-09!15;CL:0002563!1.67e-08!9;CL:0002251!1.67e-08!9;CL:0000066!4.37e-08!25;CL:0000223!3.28e-07!20|ontology_enrichment_celltype_v019_2=CL:0000066,7.53e-15,25;CL:0000239,1.35e-13,6;CL:0000677,1.35e-13,6;CL:0000584,1.35e-13,6;CL:0002076,2.78e-13,15;CL:0000223,9.33e-12,20;CL:0002563,1.36e-11,9;CL:0002251,1.36e-11,9;CL:0000075,1.52e-11,7;CL:0000682,3.08e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.60e-15!43;UBERON:0000344!1.90e-13!15;UBERON:0005409!3.13e-12!59;UBERON:0001242!7.44e-12!13;UBERON:0000060!7.44e-12!13;UBERON:0001262!7.44e-12!13;UBERON:0004786!7.44e-12!13;UBERON:0004923!1.68e-10!24;UBERON:0003350!1.67e-08!9;UBERON:0004808!1.67e-08!9;UBERON:0001277!1.67e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.23e-37,31;UBERON:0005409,5.16e-25,47;UBERON:0000344,6.90e-23,15;UBERON:0001242,3.46e-19,13;UBERON:0001262,3.46e-19,13;UBERON:0004786,3.46e-19,13;UBERON:0004923,2.13e-15,24;UBERON:0001007,3.19e-12,116;UBERON:0001555,3.19e-12,116;UBERON:0007026,3.19e-12,116;UBERON:0004119,6.80e-12,118;UBERON:0000925,6.80e-12,118;UBERON:0006595,6.80e-12,118;UBERON:0003350,1.36e-11,9;UBERON:0004808,1.36e-11,9;UBERON:0001277,1.36e-11,9;UBERON:0004921,1.76e-10,114;UBERON:0000485,2.75e-09,11;UBERON:0002108,1.03e-08,4;UBERON:0000331,3.41e-07,3;UBERON:0002116,3.41e-07,3;UBERON:0001204,3.41e-07,3;UBERON:0001168,3.41e-07,3|phase1_expression=0,2.44282785347553,4.09499315450582,5.74682001482977,3.50627010962443,2.85394762250213,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.397163804803541,0,3.51983330145495,1.37645568640302,2.8711598205751,1.29228598847722,3.878482188346,3.6104449696711,2.77233142735924,1.33038306393183,0,0,0,1.44425809875637,0.997407872150954,0.612508068787107,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0,0,0,0,0,0,0,0,0.336093799142464,0.514518872071894,0,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.302286240427142,0,0,11.5595126730318,0,0,0,0,3.06774580640504,2.07828803682295,2.47337702157238,0,0,7.64415719119937,0,0.865964164044856,1.77351905832569,1.51657333504435,0.22836775943812,0,0,0,0,0,0.150722640552623,0.23517741427141,0,2.47194967734374,0,0,0,0,0,3.72783522436244,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0.219550115291051,0,0,0,4.29544417878937,0.793351699990633,0,0,0.77320476793256,2.42020229548011,2.66853652613844,0.951128130562796,3.32170343081158,4.77626968699632,2.26201687920243,5.76973768919337,3.8992817423824,2.69645822596266,3.8904848977445,2.98711909881551,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0.420814919341911,0.822074982615345,1.77132177575523,1.09899109488962,0.863780147452604,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3114795630134,0,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0,0.425820255624806,0.35613120733451,0,0,0,0,0,0.188605079755898,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.21183207086382,0,0.32977250588296,0,0.0603129249281559,0,0,1.1659233465194,0,0,0.206386867963223,0,0,0,0,0,0,0.552799895217695,0,0.158167996790568,0,0.108005340821801,0,0.218362563746178,0,0.330613822901344,0,4.40690909192096,0,0,0,0,0,0,0.337912250981556,0.234714477291508,0.13020438484395,0,0,0,0.316011120628178,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0.179427713218951,0.335769232728157,0,0.563047426353546,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0.505394423527595,0.25347929989024,0.377252682772152,0.0936415074698824,0.192075457214608,0,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0,0,0.290692833264657,0.0941093804153306,0.25384382367503,0,0,0.271608227691724,0,0.355905054372522,0.29551344712669,0.409231043169689,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr7:137789006..137789017,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:137789006..137789017,+ | |||
|id=chr7:137789006..137789017,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.34e-09!15;CL:0002563!1.67e-08!9;CL:0002251!1.67e-08!9;CL:0000066!4.37e-08!25;CL:0000223!3.28e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.53e-15,25;CL:0000239,1.35e-13,6;CL:0000677,1.35e-13,6;CL:0000584,1.35e-13,6;CL:0002076,2.78e-13,15;CL:0000223,9.33e-12,20;CL:0002563,1.36e-11,9;CL:0002251,1.36e-11,9;CL:0000075,1.52e-11,7;CL:0000682,3.08e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.60e-15!43;UBERON:0000344!1.90e-13!15;UBERON:0005409!3.13e-12!59;UBERON:0001242!7.44e-12!13;UBERON:0000060!7.44e-12!13;UBERON:0001262!7.44e-12!13;UBERON:0004786!7.44e-12!13;UBERON:0004923!1.68e-10!24;UBERON:0003350!1.67e-08!9;UBERON:0004808!1.67e-08!9;UBERON:0001277!1.67e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.23e-37,31;UBERON:0005409,5.16e-25,47;UBERON:0000344,6.90e-23,15;UBERON:0001242,3.46e-19,13;UBERON:0001262,3.46e-19,13;UBERON:0004786,3.46e-19,13;UBERON:0004923,2.13e-15,24;UBERON:0001007,3.19e-12,116;UBERON:0001555,3.19e-12,116;UBERON:0007026,3.19e-12,116;UBERON:0004119,6.80e-12,118;UBERON:0000925,6.80e-12,118;UBERON:0006595,6.80e-12,118;UBERON:0003350,1.36e-11,9;UBERON:0004808,1.36e-11,9;UBERON:0001277,1.36e-11,9;UBERON:0004921,1.76e-10,114;UBERON:0000485,2.75e-09,11;UBERON:0002108,1.03e-08,4;UBERON:0000331,3.41e-07,3;UBERON:0002116,3.41e-07,3;UBERON:0001204,3.41e-07,3;UBERON:0001168,3.41e-07,3 | |||
|phase1_expression=0,2.44282785347553,4.09499315450582,5.74682001482977,3.50627010962443,2.85394762250213,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.397163804803541,0,3.51983330145495,1.37645568640302,2.8711598205751,1.29228598847722,3.878482188346,3.6104449696711,2.77233142735924,1.33038306393183,0,0,0,1.44425809875637,0.997407872150954,0.612508068787107,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0,0,0,0,0,0,0,0,0.336093799142464,0.514518872071894,0,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.302286240427142,0,0,11.5595126730318,0,0,0,0,3.06774580640504,2.07828803682295,2.47337702157238,0,0,7.64415719119937,0,0.865964164044856,1.77351905832569,1.51657333504435,0.22836775943812,0,0,0,0,0,0.150722640552623,0.23517741427141,0,2.47194967734374,0,0,0,0,0,3.72783522436244,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0.219550115291051,0,0,0,4.29544417878937,0.793351699990633,0,0,0.77320476793256,2.42020229548011,2.66853652613844,0.951128130562796,3.32170343081158,4.77626968699632,2.26201687920243,5.76973768919337,3.8992817423824,2.69645822596266,3.8904848977445,2.98711909881551,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0.420814919341911,0.822074982615345,1.77132177575523,1.09899109488962,0.863780147452604,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3114795630134,0,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0,0.425820255624806,0.35613120733451,0,0,0,0,0,0.188605079755898,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.21183207086382,0,0.32977250588296,0,0.0603129249281559,0,0,1.1659233465194,0,0,0.206386867963223,0,0,0,0,0,0,0.552799895217695,0,0.158167996790568,0,0.108005340821801,0,0.218362563746178,0,0.330613822901344,0,4.40690909192096,0,0,0,0,0,0,0.337912250981556,0.234714477291508,0.13020438484395,0,0,0,0.316011120628178,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0.179427713218951,0.335769232728157,0,0.563047426353546,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0.505394423527595,0.25347929989024,0.377252682772152,0.0936415074698824,0.192075457214608,0,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0,0,0.290692833264657,0.0941093804153306,0.25384382367503,0,0,0.271608227691724,0,0.355905054372522,0.29551344712669,0.409231043169689,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:137789006..137789017,+ | |||
}} |
Revision as of 12:02, 14 September 2013
Short description: | p@chr7:137789006..137789017, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:137789006..137789017, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.53e-15 | 25 |
brush border epithelial cell | 1.35e-13 | 6 |
gut absorptive cell | 1.35e-13 | 6 |
enterocyte | 1.35e-13 | 6 |
endo-epithelial cell | 2.78e-13 | 15 |
endodermal cell | 9.33e-12 | 20 |
intestinal epithelial cell | 1.36e-11 | 9 |
epithelial cell of alimentary canal | 1.36e-11 | 9 |
columnar/cuboidal epithelial cell | 1.52e-11 | 7 |
M cell of gut | 3.08e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.23e-37 | 31 |
gastrointestinal system | 5.16e-25 | 47 |
mucosa | 6.90e-23 | 15 |
intestinal mucosa | 3.46e-19 | 13 |
wall of intestine | 3.46e-19 | 13 |
gastrointestinal system mucosa | 3.46e-19 | 13 |
organ component layer | 2.13e-15 | 24 |
digestive system | 3.19e-12 | 116 |
digestive tract | 3.19e-12 | 116 |
primitive gut | 3.19e-12 | 116 |
endoderm-derived structure | 6.80e-12 | 118 |
endoderm | 6.80e-12 | 118 |
presumptive endoderm | 6.80e-12 | 118 |
epithelium of mucosa | 1.36e-11 | 9 |
gastrointestinal system epithelium | 1.36e-11 | 9 |
intestinal epithelium | 1.36e-11 | 9 |
subdivision of digestive tract | 1.76e-10 | 114 |
simple columnar epithelium | 2.75e-09 | 11 |
small intestine | 1.03e-08 | 4 |
ileal mucosa | 3.41e-07 | 3 |
ileum | 3.41e-07 | 3 |
mucosa of small intestine | 3.41e-07 | 3 |
wall of small intestine | 3.41e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.