FFCP PHASE1:Mm9::chr1:135261737..135261767,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=214253|HGNC=|MCL_coexpression_id=77|UniProt=|association_with_transcript=-141bp_to_ENSMUST00000129213,uc007cqi.2_5end|description=CAGE_peak_6_at_Etnk2_5end|id=chr1:135261737..135261767,+|ontology_enrichment_celltype=CL:0000181!1.25e-13!5;CL:0000417!1.25e-13!5;CL:0000668!1.25e-13!5;CL:0000412!1.25e-13!5;CL:0000182!1.25e-13!5;CL:0000414!2.53e-08!11|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!1.85e-38!18;UBERON:0005564!1.85e-38!18;UBERON:0004176!8.31e-36!17;UBERON:0009196!8.31e-36!17;UBERON:0009117!8.31e-36!17;UBERON:0000473!7.09e-29!14;UBERON:0003133!6.27e-28!24;UBERON:0003135!8.96e-27!15;UBERON:0005156!1.69e-25!26;UBERON:0000990!1.69e-25!26;UBERON:0003101!6.19e-25!16;UBERON:0000079!6.19e-25!16;UBERON:0002323!7.87e-17!37;UBERON:0004458!7.87e-17!37;UBERON:0003886!2.72e-16!38;UBERON:0002553!8.83e-16!39;UBERON:0000466!1.94e-14!79;UBERON:0000464!1.16e-09!57;UBERON:0000992!2.58e-08!3|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.70e-54,14;UBERON:0003135,2.17e-50,15;UBERON:0000991,1.25e-49,18;UBERON:0005564,1.25e-49,18;UBERON:0003101,3.50e-47,16;UBERON:0000079,3.50e-47,16;UBERON:0004176,2.37e-44,17;UBERON:0009196,2.37e-44,17;UBERON:0009117,2.37e-44,17;UBERON:0003133,5.84e-37,24;UBERON:0005156,4.93e-34,26;UBERON:0000990,4.93e-34,26;UBERON:0002323,1.42e-23,37;UBERON:0004458,1.42e-23,37;UBERON:0003886,6.35e-23,38;UBERON:0002553,2.64e-22,39;UBERON:0001048,7.70e-08,134|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0.860423876981386,1.3599426674155,0.539703191637817,0.649776417447669,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0,0,0,0,0.470354828542819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18454826909589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397912944082302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1858105083486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.534196811001766,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.50954350947352,8.37292657846281,5.79104716599842,11.8615224889869,11.1077448190849,12.5027532863176,8.21500670520278,17.1869787994014,19.9232754408851,3.8653459332161,4.03242008761012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0.197008964751127,0,0,0,0,0,0,0,0,0|short_description=p6@Etnk2}} | ||
|EntrezGene=214253 | |||
|HGNC= | |||
|MCL_coexpression_id=77 | |||
|UniProt= | |||
|association_with_transcript=-141bp_to_ENSMUST00000129213,uc007cqi.2_5end | |||
|description=CAGE_peak_6_at_Etnk2_5end | |||
|id=chr1:135261737..135261767,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.25e-13!5;CL:0000417!1.25e-13!5;CL:0000668!1.25e-13!5;CL:0000412!1.25e-13!5;CL:0000182!1.25e-13!5;CL:0000414!2.53e-08!11 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!1.85e-38!18;UBERON:0005564!1.85e-38!18;UBERON:0004176!8.31e-36!17;UBERON:0009196!8.31e-36!17;UBERON:0009117!8.31e-36!17;UBERON:0000473!7.09e-29!14;UBERON:0003133!6.27e-28!24;UBERON:0003135!8.96e-27!15;UBERON:0005156!1.69e-25!26;UBERON:0000990!1.69e-25!26;UBERON:0003101!6.19e-25!16;UBERON:0000079!6.19e-25!16;UBERON:0002323!7.87e-17!37;UBERON:0004458!7.87e-17!37;UBERON:0003886!2.72e-16!38;UBERON:0002553!8.83e-16!39;UBERON:0000466!1.94e-14!79;UBERON:0000464!1.16e-09!57;UBERON:0000992!2.58e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.70e-54,14;UBERON:0003135,2.17e-50,15;UBERON:0000991,1.25e-49,18;UBERON:0005564,1.25e-49,18;UBERON:0003101,3.50e-47,16;UBERON:0000079,3.50e-47,16;UBERON:0004176,2.37e-44,17;UBERON:0009196,2.37e-44,17;UBERON:0009117,2.37e-44,17;UBERON:0003133,5.84e-37,24;UBERON:0005156,4.93e-34,26;UBERON:0000990,4.93e-34,26;UBERON:0002323,1.42e-23,37;UBERON:0004458,1.42e-23,37;UBERON:0003886,6.35e-23,38;UBERON:0002553,2.64e-22,39;UBERON:0001048,7.70e-08,134 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0.860423876981386,1.3599426674155,0.539703191637817,0.649776417447669,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0,0,0,0,0.470354828542819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18454826909589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397912944082302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1858105083486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.534196811001766,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.50954350947352,8.37292657846281,5.79104716599842,11.8615224889869,11.1077448190849,12.5027532863176,8.21500670520278,17.1869787994014,19.9232754408851,3.8653459332161,4.03242008761012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0.197008964751127,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@Etnk2 | |||
}} |
Revision as of 18:53, 13 September 2013
Short description: | p6@Etnk2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Etnk2_5end |
Coexpression cluster: | MCL_coexpression_mm9:77 |
Association with transcript: | -141bp_to_ENSMUST00000129213, uc007cqi.2_5end |
EntrezGene: | Etnk2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 4.70e-54 | 14 |
male reproductive organ | 2.17e-50 | 15 |
gonad | 1.25e-49 | 18 |
gonad primordium | 1.25e-49 | 18 |
male organism | 3.50e-47 | 16 |
male reproductive system | 3.50e-47 | 16 |
external genitalia | 2.37e-44 | 17 |
indifferent external genitalia | 2.37e-44 | 17 |
indifferent gonad | 2.37e-44 | 17 |
reproductive organ | 5.84e-37 | 24 |
reproductive structure | 4.93e-34 | 26 |
reproductive system | 4.93e-34 | 26 |
body cavity | 1.42e-23 | 37 |
body cavity or lining | 1.42e-23 | 37 |
body cavity precursor | 6.35e-23 | 38 |
anatomical cavity | 2.64e-22 | 39 |
primordium | 7.70e-08 | 134 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.