FFCP PHASE1:Mm9::chr15:101980933..101981008,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=223920|HGNC=|MCL_coexpression_id=24|UniProt=O88908|association_with_transcript=0bp_to_ENSMUST00000023806,NM_146064,uc007xut.1_5end|description=CAGE_peak_1_at_Soat2_5end|id=chr15:101980933..101981008,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,1.67e-07,9;CL:0002251,1.67e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.22e-21!59;UBERON:0004119!1.78e-20!130;UBERON:0000925!1.78e-20!130;UBERON:0006595!1.78e-20!130;UBERON:0001007!4.43e-20!128;UBERON:0001555!4.43e-20!128;UBERON:0007026!4.43e-20!128;UBERON:0004921!7.66e-19!126;UBERON:0004185!7.66e-19!126;UBERON:0000160!7.94e-18!43;UBERON:0004923!7.01e-12!24;UBERON:0002107!8.67e-12!22;UBERON:0007499!8.67e-12!22;UBERON:0006925!8.67e-12!22;UBERON:0009497!8.67e-12!22;UBERON:0000015!8.67e-12!22;UBERON:0002423!8.67e-12!22;UBERON:0006235!8.67e-12!22;UBERON:0008835!8.67e-12!22;UBERON:0003894!8.67e-12!22;UBERON:0004161!8.67e-12!22;UBERON:0008836!8.67e-12!22;UBERON:0009854!9.21e-12!23;UBERON:0009856!9.21e-12!23;UBERON:0000344!2.41e-10!15;UBERON:0001242!4.39e-09!13;UBERON:0000060!4.39e-09!13;UBERON:0001262!4.39e-09!13;UBERON:0004786!4.39e-09!13;UBERON:0002365!7.47e-09!25;UBERON:0002330!7.47e-09!25;UBERON:0003929!1.08e-08!55;UBERON:0005172!3.76e-08!49;UBERON:0005173!3.76e-08!49;UBERON:0002417!3.76e-08!49;UBERON:0000916!3.76e-08!49;UBERON:0005057!9.74e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.42e-21,47;UBERON:0000160,2.75e-19,31;UBERON:0004119,4.40e-17,118;UBERON:0000925,4.40e-17,118;UBERON:0006595,4.40e-17,118;UBERON:0001007,1.12e-16,116;UBERON:0001555,1.12e-16,116;UBERON:0007026,1.12e-16,116;UBERON:0004921,2.05e-15,114;UBERON:0004923,5.21e-14,24;UBERON:0002107,6.73e-14,22;UBERON:0007499,6.73e-14,22;UBERON:0006925,6.73e-14,22;UBERON:0009497,6.73e-14,22;UBERON:0000015,6.73e-14,22;UBERON:0002423,6.73e-14,22;UBERON:0006235,6.73e-14,22;UBERON:0008835,6.73e-14,22;UBERON:0003894,6.73e-14,22;UBERON:0004161,6.73e-14,22;UBERON:0008836,6.73e-14,22;UBERON:0009854,7.23e-14,23;UBERON:0009856,7.23e-14,23;UBERON:0000344,3.71e-12,15;UBERON:0002365,4.21e-11,25;UBERON:0002330,4.21e-11,25;UBERON:0001242,1.23e-10,13;UBERON:0001262,1.23e-10,13;UBERON:0004786,1.23e-10,13;UBERON:0003929,1.25e-09,55;UBERON:0003350,1.67e-07,9;UBERON:0004808,1.67e-07,9;UBERON:0001277,1.67e-07,9|phase1_expression=0,292.441391601785,222.949627300873,395.92565260064,420.251517424985,33.7437336542898,30.3696432774183,0.258246646883153,0,0,0.34243593645101,0,0,0,5.66286595086627,8.90891176515234,8.39474253753776,0.157731082679119,0.274228867211478,1.27316895539409,0.255129870453209,4.96454756004426,3.91799683708403,61.4370903526682,81.6697040599125,148.151846741675,116.30573896295,77.5696437669201,75.6293209436368,148.949806688119,39.0245698753336,24.131165591466,12.916360539276,15.8481681015439,15.0202842270663,11.6364251750945,10.6168065256432,0.418531630736908,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672187598284928,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,2.31891590961342,30.1148356943485,24.478968013479,31.8424883066312,35.7377029596218,33.1539896452028,9.12888730856387,0.340860645156116,0,0,0,0,0,0,0,0,0,36.3104737506611,1.8125651855302,1.03909497345377,1.73485326766136,2.74018930480927,1.38369298353635,0.60289056221049,0.705532242814229,0.502666365318702,16.5620628382031,0.144599356919912,0,1.13236794963186,1.54589062922275,1.93950101254089,1.86391761218122,0,0,97.3291380344733,3.11519323715393,2.99951365496704,2.28726408731516,0,0,0,0,0,0,0,0.101839363850316,1.7416975885413,0,0.210441855886474,0.130120442962704,0,0,0.753524089178575,0,0.12811372028485,0,0,0,0.189106080167819,0,0.219195732427575,0.834141747676794,0.348252166522167,0.61734640922383,0.199034266818493,0.702213187313235,0,0.568326998791185,1.24275463521301,0.938104239924385,0,0.23674473558521,0.196764231747404,0.154267112887378,0.465067889500816,0,0,0,0,0,0,0,0.134206418760372,0,0,202.546713969068,80.9218733990446,0.213288250535234,0.928946687441754,7.34544529535932,22.5885547578144,32.6895724451959,44.7030221364514,120.055852570761,68.5147651651885,63.0851374088676,65.0587663574563,52.4453394350433,75.5008303269546,86.8874960496271,85.8298887726323,0,0.913988100877831,0,0.203651327845314,0.193952487167626,0.49095073923223,0.252946148497029,0.442830443938806,0.156998727841375,0.616985819609003,30.8310732170635,14.8492144087324,19.6558995113203,18.2138311031732,22.7203335955123,28.7000820105376,24.6987076227977,17.5494643844994,14.7543056365282,33.771053822134,38.8174157623857,60.6589744699661,56.4788188337355,54.304458758629,33.3679189150757,26.5343936749852,0.369506380333209,0.947457058852424,0.325929952884052,0.339490171550376,0.234690248288502,0,0.238043640886014,0.195133647857799,0,0.221464689648775,0.318909537314974,0,0.518054945597687,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0.164970122972535,2.65490276679926,0.728341908464944,2.41858845571801,3.77210159511796,4.13422650033082,2.15204603560749,19.898978573953,1.09060118843252,3.20847640546249,0.948110273807448,1.05418608574999,2.06271086496374,0,0,0,0.214337035031592,0,0,0.164549020602121,0,3.28540391289194,1.27099242518292,0,0,0.645857706783622,0.120625849856312,0.119372344003136,0,89.4846168453642,0,4.61351378154202,2.47664241555867,4.8150577116125,7.72310673719233,5.87785179200408,4.57556346413045,0.849892149969277,1.53946597556024,1.38199973804424,5.72802370809068,0.474503990371703,2.03319467126849,4.32021363287205,3.3454127362315,5.02233896616208,5.25970950900801,12.4806718145257,4.4498510137285,0.90730481304255,0,0,0.448549638131936,0,0,0.129159823477731,0,0.117357238645754,1.17183946359555,0,0,0,0,1.21635129174099,2.36235201479103,1.81889152168913,1.61124026100733,0.596044064343795,1.08175904567972,1.03382669022204,0.605798699688886,0.838274873204998,0.302478555410522,1.26695244961678,0.577271049841977,1.40252282617883,0,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,1.70733605754134,3.16038732188782,7.1268475293514,3.12533964365024,3.11145418922261,4.12070114477788,4.81378814387723,4.80124702351215,4.05566879824384,5.84741658296836,5.61849044819294,5.50616310681876,4.36509564062661,4.28664322154766,5.56244764535306,4.62982129112892,4.53294490883637,4.71036544430071,4.80016953339582,3.37204031702741,7.62995807831427,4.79643174886684,5.8347815857505,4.99226186560891,4.57319932181931,4.99832451731901,7.60503037536826,6.17256498823512,5.21994079746366,4.72821515402705,0.818462086339379,4.02835787083512,4.82266527452853,0.249810577937946,4.21076895201735,7.30561583764214,0.57386499620653,1.32354851471709,0.463735671240843|short_description=p1@Soat2}} | ||
|EntrezGene=223920 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|UniProt=O88908 | |||
|association_with_transcript=0bp_to_ENSMUST00000023806,NM_146064,uc007xut.1_5end | |||
|description=CAGE_peak_1_at_Soat2_5end | |||
|id=chr15:101980933..101981008,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.67e-07,9;CL:0002251,1.67e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.22e-21!59;UBERON:0004119!1.78e-20!130;UBERON:0000925!1.78e-20!130;UBERON:0006595!1.78e-20!130;UBERON:0001007!4.43e-20!128;UBERON:0001555!4.43e-20!128;UBERON:0007026!4.43e-20!128;UBERON:0004921!7.66e-19!126;UBERON:0004185!7.66e-19!126;UBERON:0000160!7.94e-18!43;UBERON:0004923!7.01e-12!24;UBERON:0002107!8.67e-12!22;UBERON:0007499!8.67e-12!22;UBERON:0006925!8.67e-12!22;UBERON:0009497!8.67e-12!22;UBERON:0000015!8.67e-12!22;UBERON:0002423!8.67e-12!22;UBERON:0006235!8.67e-12!22;UBERON:0008835!8.67e-12!22;UBERON:0003894!8.67e-12!22;UBERON:0004161!8.67e-12!22;UBERON:0008836!8.67e-12!22;UBERON:0009854!9.21e-12!23;UBERON:0009856!9.21e-12!23;UBERON:0000344!2.41e-10!15;UBERON:0001242!4.39e-09!13;UBERON:0000060!4.39e-09!13;UBERON:0001262!4.39e-09!13;UBERON:0004786!4.39e-09!13;UBERON:0002365!7.47e-09!25;UBERON:0002330!7.47e-09!25;UBERON:0003929!1.08e-08!55;UBERON:0005172!3.76e-08!49;UBERON:0005173!3.76e-08!49;UBERON:0002417!3.76e-08!49;UBERON:0000916!3.76e-08!49;UBERON:0005057!9.74e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.42e-21,47;UBERON:0000160,2.75e-19,31;UBERON:0004119,4.40e-17,118;UBERON:0000925,4.40e-17,118;UBERON:0006595,4.40e-17,118;UBERON:0001007,1.12e-16,116;UBERON:0001555,1.12e-16,116;UBERON:0007026,1.12e-16,116;UBERON:0004921,2.05e-15,114;UBERON:0004923,5.21e-14,24;UBERON:0002107,6.73e-14,22;UBERON:0007499,6.73e-14,22;UBERON:0006925,6.73e-14,22;UBERON:0009497,6.73e-14,22;UBERON:0000015,6.73e-14,22;UBERON:0002423,6.73e-14,22;UBERON:0006235,6.73e-14,22;UBERON:0008835,6.73e-14,22;UBERON:0003894,6.73e-14,22;UBERON:0004161,6.73e-14,22;UBERON:0008836,6.73e-14,22;UBERON:0009854,7.23e-14,23;UBERON:0009856,7.23e-14,23;UBERON:0000344,3.71e-12,15;UBERON:0002365,4.21e-11,25;UBERON:0002330,4.21e-11,25;UBERON:0001242,1.23e-10,13;UBERON:0001262,1.23e-10,13;UBERON:0004786,1.23e-10,13;UBERON:0003929,1.25e-09,55;UBERON:0003350,1.67e-07,9;UBERON:0004808,1.67e-07,9;UBERON:0001277,1.67e-07,9 | |||
|phase1_expression=0,292.441391601785,222.949627300873,395.92565260064,420.251517424985,33.7437336542898,30.3696432774183,0.258246646883153,0,0,0.34243593645101,0,0,0,5.66286595086627,8.90891176515234,8.39474253753776,0.157731082679119,0.274228867211478,1.27316895539409,0.255129870453209,4.96454756004426,3.91799683708403,61.4370903526682,81.6697040599125,148.151846741675,116.30573896295,77.5696437669201,75.6293209436368,148.949806688119,39.0245698753336,24.131165591466,12.916360539276,15.8481681015439,15.0202842270663,11.6364251750945,10.6168065256432,0.418531630736908,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672187598284928,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,2.31891590961342,30.1148356943485,24.478968013479,31.8424883066312,35.7377029596218,33.1539896452028,9.12888730856387,0.340860645156116,0,0,0,0,0,0,0,0,0,36.3104737506611,1.8125651855302,1.03909497345377,1.73485326766136,2.74018930480927,1.38369298353635,0.60289056221049,0.705532242814229,0.502666365318702,16.5620628382031,0.144599356919912,0,1.13236794963186,1.54589062922275,1.93950101254089,1.86391761218122,0,0,97.3291380344733,3.11519323715393,2.99951365496704,2.28726408731516,0,0,0,0,0,0,0,0.101839363850316,1.7416975885413,0,0.210441855886474,0.130120442962704,0,0,0.753524089178575,0,0.12811372028485,0,0,0,0.189106080167819,0,0.219195732427575,0.834141747676794,0.348252166522167,0.61734640922383,0.199034266818493,0.702213187313235,0,0.568326998791185,1.24275463521301,0.938104239924385,0,0.23674473558521,0.196764231747404,0.154267112887378,0.465067889500816,0,0,0,0,0,0,0,0.134206418760372,0,0,202.546713969068,80.9218733990446,0.213288250535234,0.928946687441754,7.34544529535932,22.5885547578144,32.6895724451959,44.7030221364514,120.055852570761,68.5147651651885,63.0851374088676,65.0587663574563,52.4453394350433,75.5008303269546,86.8874960496271,85.8298887726323,0,0.913988100877831,0,0.203651327845314,0.193952487167626,0.49095073923223,0.252946148497029,0.442830443938806,0.156998727841375,0.616985819609003,30.8310732170635,14.8492144087324,19.6558995113203,18.2138311031732,22.7203335955123,28.7000820105376,24.6987076227977,17.5494643844994,14.7543056365282,33.771053822134,38.8174157623857,60.6589744699661,56.4788188337355,54.304458758629,33.3679189150757,26.5343936749852,0.369506380333209,0.947457058852424,0.325929952884052,0.339490171550376,0.234690248288502,0,0.238043640886014,0.195133647857799,0,0.221464689648775,0.318909537314974,0,0.518054945597687,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0.164970122972535,2.65490276679926,0.728341908464944,2.41858845571801,3.77210159511796,4.13422650033082,2.15204603560749,19.898978573953,1.09060118843252,3.20847640546249,0.948110273807448,1.05418608574999,2.06271086496374,0,0,0,0.214337035031592,0,0,0.164549020602121,0,3.28540391289194,1.27099242518292,0,0,0.645857706783622,0.120625849856312,0.119372344003136,0,89.4846168453642,0,4.61351378154202,2.47664241555867,4.8150577116125,7.72310673719233,5.87785179200408,4.57556346413045,0.849892149969277,1.53946597556024,1.38199973804424,5.72802370809068,0.474503990371703,2.03319467126849,4.32021363287205,3.3454127362315,5.02233896616208,5.25970950900801,12.4806718145257,4.4498510137285,0.90730481304255,0,0,0.448549638131936,0,0,0.129159823477731,0,0.117357238645754,1.17183946359555,0,0,0,0,1.21635129174099,2.36235201479103,1.81889152168913,1.61124026100733,0.596044064343795,1.08175904567972,1.03382669022204,0.605798699688886,0.838274873204998,0.302478555410522,1.26695244961678,0.577271049841977,1.40252282617883,0,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,1.70733605754134,3.16038732188782,7.1268475293514,3.12533964365024,3.11145418922261,4.12070114477788,4.81378814387723,4.80124702351215,4.05566879824384,5.84741658296836,5.61849044819294,5.50616310681876,4.36509564062661,4.28664322154766,5.56244764535306,4.62982129112892,4.53294490883637,4.71036544430071,4.80016953339582,3.37204031702741,7.62995807831427,4.79643174886684,5.8347815857505,4.99226186560891,4.57319932181931,4.99832451731901,7.60503037536826,6.17256498823512,5.21994079746366,4.72821515402705,0.818462086339379,4.02835787083512,4.82266527452853,0.249810577937946,4.21076895201735,7.30561583764214,0.57386499620653,1.32354851471709,0.463735671240843 | |||
|short_description=p1@Soat2 | |||
}} |
Revision as of 10:03, 13 September 2013
Short description: | p1@Soat2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Soat2_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000023806, NM_146064, uc007xut.1_5end |
EntrezGene: | Soat2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.67e-07 | 9 |
epithelial cell of alimentary canal | 1.67e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.42e-21 | 47 |
intestine | 2.75e-19 | 31 |
endoderm-derived structure | 4.40e-17 | 118 |
endoderm | 4.40e-17 | 118 |
presumptive endoderm | 4.40e-17 | 118 |
digestive system | 1.12e-16 | 116 |
digestive tract | 1.12e-16 | 116 |
primitive gut | 1.12e-16 | 116 |
subdivision of digestive tract | 2.05e-15 | 114 |
organ component layer | 5.21e-14 | 24 |
liver | 6.73e-14 | 22 |
epithelial sac | 6.73e-14 | 22 |
digestive gland | 6.73e-14 | 22 |
epithelium of foregut-midgut junction | 6.73e-14 | 22 |
anatomical boundary | 6.73e-14 | 22 |
hepatobiliary system | 6.73e-14 | 22 |
foregut-midgut junction | 6.73e-14 | 22 |
hepatic diverticulum | 6.73e-14 | 22 |
liver primordium | 6.73e-14 | 22 |
septum transversum | 6.73e-14 | 22 |
liver bud | 6.73e-14 | 22 |
digestive tract diverticulum | 7.23e-14 | 23 |
sac | 7.23e-14 | 23 |
mucosa | 3.71e-12 | 15 |
exocrine gland | 4.21e-11 | 25 |
exocrine system | 4.21e-11 | 25 |
intestinal mucosa | 1.23e-10 | 13 |
wall of intestine | 1.23e-10 | 13 |
gastrointestinal system mucosa | 1.23e-10 | 13 |
gut epithelium | 1.25e-09 | 55 |
epithelium of mucosa | 1.67e-07 | 9 |
gastrointestinal system epithelium | 1.67e-07 | 9 |
intestinal epithelium | 1.67e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.