Personal tools

FFCP PHASE1:Mm9::chr17:35839242..35839319,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=12305|HGNC=|MCL_coexpression_id=427|UniProt=F7BZR8|association_with_transcript=0bp_to_ENSMUST00000135078_5end|description=CAGE_peak_7_at_Ddr1_5end|id=chr17:35839242..35839319,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,3.40e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!1.37e-11!18;UBERON:0000948!1.37e-11!18;UBERON:0005498!1.37e-11!18;UBERON:0004140!1.37e-11!18;UBERON:0009881!1.37e-11!18;UBERON:0004141!1.37e-11!18;UBERON:0003084!1.37e-11!18;UBERON:0007005!1.37e-11!18;UBERON:0004139!1.37e-11!18;UBERON:0004291!1.37e-11!18;UBERON:0004535!2.91e-09!23;UBERON:0001009!2.91e-09!23;UBERON:0004872!4.79e-09!33|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.36e-12,18;UBERON:0000948,1.36e-12,18;UBERON:0005498,1.36e-12,18;UBERON:0004140,1.36e-12,18;UBERON:0009881,1.36e-12,18;UBERON:0004141,1.36e-12,18;UBERON:0003084,1.36e-12,18;UBERON:0007005,1.36e-12,18;UBERON:0004139,1.36e-12,18;UBERON:0004291,1.36e-12,18;UBERON:0004535,1.06e-09,23;UBERON:0001009,1.06e-09,23;UBERON:0004872,2.20e-09,33|phase1_expression=1.44133962394315,1.04692622291808,0.454999239389536,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,1.11514624341466,0.367093504323363,28.9484797408774,14.171635164729,13.8402295122717,16.1376816231655,6.43937539476668,12.9377307928474,0,0,0,2.82985379639542,16.3324060765091,15.9858348606007,1.21389876515759,0.528990979272033,0.633831403506179,2.03306719241479,3.55717918444456,0.899899717281399,0,0,6.2916023208865,11.1423308543251,0.829516898467821,0.945041568321835,0.420649922702764,1.71390590642282,0.662605622854841,0.367472397644862,0.287536413054709,0,1.10115880999389,1.27687338085188,1.68967186581868,0.659431438650969,0.548925861614458,0,1.3959149950069,2.25105044012672,1.37518422999129,0.294628585473668,1.56608848879013,0.372798891650601,0.151452386666368,0,1.44932244350839,0,0,0,0,0,0.702222100658759,4.09032774187339,3.63700406444016,3.88673531961374,5.7745802108439,7.69958864485907,5.09610479413291,7.11066703153331,0,0,0,0.5709193985953,0.258937883647172,1.03909497345377,1.90833859442749,2.13125834818499,2.07553947530453,1.65794904607885,1.52865319276416,0.376999773989026,1.97755974187499,0.578397427679647,1.76922110389975,4.85300549842228,0.883366073841574,0.969750506270444,1.86391761218122,0.292780797011547,2.51336048176146,0.766371165625774,0,0,0,1.79748767285787,0.457500602818626,0.502617408451458,0.695297280769106,0.767146371990992,1.45451631191692,0.811206315338788,3.86989582631202,1.49288364732112,0.252722758433675,1.68353484709179,1.30120442962704,1.37941262660084,2.16074555766419,2.86339153887859,2.38127747029647,2.3060469651273,2.34254311399322,4.13925393182425,0,1.32374256117473,1.23165786914764,2.19195732427575,2.50242524303038,4.52727816478817,1.23469281844766,1.79130840136644,0,0,0,10.1491628542396,7.03578179943289,9.54328925743379,10.180023630164,10.8220327461072,10.3358965634543,11.6266972375204,12.0723030629829,10.8591768401468,9.37991144506839,5.25335885053105,3.32382119138008,2.48539978623065,4.61055242111206,6.03928884421673,1.05144974282064,0.411618449517138,0,0.528901133327089,0.853153002140936,2.55460339046482,2.96395161040815,2.21851877085677,2.89091456998331,2.66315876557583,1.42358718463353,2.47048432086016,2.26201687920243,0.596869416123452,1.9496408711912,2.69645822596266,1.29682829924817,0.398282546508734,0.948339504765408,1.37098215131675,2.25415471346161,2.24016460629846,1.74557238450863,1.8936671370386,2.27651533647326,0.885660887877613,1.09899109488962,1.60416313098341,0.296452627087149,0.83422552858047,0,0.224862112384854,0.608580364165509,0.964708639009667,0.50925170356284,1.15078454980324,1.13494658742525,0.274561413188081,0,0.744281895337007,0.936113019343682,0.252578877947112,0.538192240565737,0,3.69506380333209,1.13694847062291,2.44447464663039,1.52770577197669,2.58159273117352,3.1826188913945,6.9032655856944,4.09780660501378,1.57635144106191,1.99318220683897,1.59454768657487,4.7520361267564,2.76295970985433,3.7608755231193,0,0,0.491764273019036,0.827810238914197,2.24770825982909,3.04750385139728,0.983609672260053,2.27223834483936,0,0,1.07711698866399,0.238968797952552,0.668396022247182,0.283076530788832,0,0,0,1.28528526568723,0.425820255624806,5.34196811001766,4.39794790254655,0.989820737835213,0,1.69946445308487,1.209294227859,0.565815239267694,1.47650946440386,1.53717573971964,1.80899805217755,2.18120237686503,1.78248689192361,1.8962205476149,3.16255825724996,1.03135543248187,0.680879211507576,0.540183282093931,1.03486947026204,2.7863814554107,1.06404140185364,1.96205699362278,1.48094118541909,3.65357938937519,0,1.48282449604674,0.441056796109924,0.98931751764888,0.645857706783622,1.20625849856312,1.07435109602823,0.328281799490123,0.874442509889552,2.03967832211561,1.19609616558497,5.15967169908056,5.92622487583077,0.941842285023455,1.0935538217682,2.28778173206523,0,0,0,0.954670618015114,1.10717597753397,2.23651413839534,1.51207477150522,3.13632444021703,2.62035076495413,1.88810084938749,1.32245529160537,2.09404753587224,1.16653475962614,0,0,0.897099276263873,1.15820943319968,2.91676782516071,2.71235629303235,2.19642963138012,2.34714477291508,2.604087696879,0.838874755405687,0.966336483304024,0.288030006257865,0.948033361884535,2.02725215290164,0.924398614483445,1.03936658382236,0.895133478337407,0.198681354781265,0.480781798079875,0.738447635872886,0.302899349844443,0.533447646584999,0.604957110821043,0.292373642219257,0.192423683280659,0.116876902181569,0.680191150845634,0.221985953374065,0.0897138566094757,1.00730769818447,1.73870634628971,0.375364950902364,0.36630324853453,0.428736758158132,0,0.564751842617067,0.920650473014354,1.14579102687879,0.515559547031063,0.685082519770642,0,0,1.35096360967266,0,1.03552062350364,0.207574695168353,1.19707462020309,1.53660245178721,1.94485373654635,1.25767897576789,0.735374033800057,3.55594764482584,3.09052585858341,2.88827288632634,3.53776096469316,0.760437899670719,1.50901073108861,2.24739617927718,2.36893063898016,2.41228969613576,2.85776214769844,1.97003354106254,1.54327376370964,2.47251540481984,2.35518272215036,1.37147700954166,1.4198064492747,2.62279808942053,1.74415699958794,2.35273451038327,2.03075058940024,2.56099162021882,1.31534855718921,2.44447404922551,0.561142271657738,2.84724043498018,2.46261205938909,1.63692417267876,2.47898945897546,1.35034627686799,2.49810577937946,2.57324769289949,2.57845264857958,4.01705497344571,3.75005412503176,3.2461496986859|short_description=p7@Ddr1}}
|EntrezGene=12305
|HGNC=
|MCL_coexpression_id=427
|UniProt=F7BZR8
|association_with_transcript=0bp_to_ENSMUST00000135078_5end
|description=CAGE_peak_7_at_Ddr1_5end
|id=chr17:35839242..35839319,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002453,3.40e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007100!1.37e-11!18;UBERON:0000948!1.37e-11!18;UBERON:0005498!1.37e-11!18;UBERON:0004140!1.37e-11!18;UBERON:0009881!1.37e-11!18;UBERON:0004141!1.37e-11!18;UBERON:0003084!1.37e-11!18;UBERON:0007005!1.37e-11!18;UBERON:0004139!1.37e-11!18;UBERON:0004291!1.37e-11!18;UBERON:0004535!2.91e-09!23;UBERON:0001009!2.91e-09!23;UBERON:0004872!4.79e-09!33
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.36e-12,18;UBERON:0000948,1.36e-12,18;UBERON:0005498,1.36e-12,18;UBERON:0004140,1.36e-12,18;UBERON:0009881,1.36e-12,18;UBERON:0004141,1.36e-12,18;UBERON:0003084,1.36e-12,18;UBERON:0007005,1.36e-12,18;UBERON:0004139,1.36e-12,18;UBERON:0004291,1.36e-12,18;UBERON:0004535,1.06e-09,23;UBERON:0001009,1.06e-09,23;UBERON:0004872,2.20e-09,33
|phase1_expression=1.44133962394315,1.04692622291808,0.454999239389536,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,1.11514624341466,0.367093504323363,28.9484797408774,14.171635164729,13.8402295122717,16.1376816231655,6.43937539476668,12.9377307928474,0,0,0,2.82985379639542,16.3324060765091,15.9858348606007,1.21389876515759,0.528990979272033,0.633831403506179,2.03306719241479,3.55717918444456,0.899899717281399,0,0,6.2916023208865,11.1423308543251,0.829516898467821,0.945041568321835,0.420649922702764,1.71390590642282,0.662605622854841,0.367472397644862,0.287536413054709,0,1.10115880999389,1.27687338085188,1.68967186581868,0.659431438650969,0.548925861614458,0,1.3959149950069,2.25105044012672,1.37518422999129,0.294628585473668,1.56608848879013,0.372798891650601,0.151452386666368,0,1.44932244350839,0,0,0,0,0,0.702222100658759,4.09032774187339,3.63700406444016,3.88673531961374,5.7745802108439,7.69958864485907,5.09610479413291,7.11066703153331,0,0,0,0.5709193985953,0.258937883647172,1.03909497345377,1.90833859442749,2.13125834818499,2.07553947530453,1.65794904607885,1.52865319276416,0.376999773989026,1.97755974187499,0.578397427679647,1.76922110389975,4.85300549842228,0.883366073841574,0.969750506270444,1.86391761218122,0.292780797011547,2.51336048176146,0.766371165625774,0,0,0,1.79748767285787,0.457500602818626,0.502617408451458,0.695297280769106,0.767146371990992,1.45451631191692,0.811206315338788,3.86989582631202,1.49288364732112,0.252722758433675,1.68353484709179,1.30120442962704,1.37941262660084,2.16074555766419,2.86339153887859,2.38127747029647,2.3060469651273,2.34254311399322,4.13925393182425,0,1.32374256117473,1.23165786914764,2.19195732427575,2.50242524303038,4.52727816478817,1.23469281844766,1.79130840136644,0,0,0,10.1491628542396,7.03578179943289,9.54328925743379,10.180023630164,10.8220327461072,10.3358965634543,11.6266972375204,12.0723030629829,10.8591768401468,9.37991144506839,5.25335885053105,3.32382119138008,2.48539978623065,4.61055242111206,6.03928884421673,1.05144974282064,0.411618449517138,0,0.528901133327089,0.853153002140936,2.55460339046482,2.96395161040815,2.21851877085677,2.89091456998331,2.66315876557583,1.42358718463353,2.47048432086016,2.26201687920243,0.596869416123452,1.9496408711912,2.69645822596266,1.29682829924817,0.398282546508734,0.948339504765408,1.37098215131675,2.25415471346161,2.24016460629846,1.74557238450863,1.8936671370386,2.27651533647326,0.885660887877613,1.09899109488962,1.60416313098341,0.296452627087149,0.83422552858047,0,0.224862112384854,0.608580364165509,0.964708639009667,0.50925170356284,1.15078454980324,1.13494658742525,0.274561413188081,0,0.744281895337007,0.936113019343682,0.252578877947112,0.538192240565737,0,3.69506380333209,1.13694847062291,2.44447464663039,1.52770577197669,2.58159273117352,3.1826188913945,6.9032655856944,4.09780660501378,1.57635144106191,1.99318220683897,1.59454768657487,4.7520361267564,2.76295970985433,3.7608755231193,0,0,0.491764273019036,0.827810238914197,2.24770825982909,3.04750385139728,0.983609672260053,2.27223834483936,0,0,1.07711698866399,0.238968797952552,0.668396022247182,0.283076530788832,0,0,0,1.28528526568723,0.425820255624806,5.34196811001766,4.39794790254655,0.989820737835213,0,1.69946445308487,1.209294227859,0.565815239267694,1.47650946440386,1.53717573971964,1.80899805217755,2.18120237686503,1.78248689192361,1.8962205476149,3.16255825724996,1.03135543248187,0.680879211507576,0.540183282093931,1.03486947026204,2.7863814554107,1.06404140185364,1.96205699362278,1.48094118541909,3.65357938937519,0,1.48282449604674,0.441056796109924,0.98931751764888,0.645857706783622,1.20625849856312,1.07435109602823,0.328281799490123,0.874442509889552,2.03967832211561,1.19609616558497,5.15967169908056,5.92622487583077,0.941842285023455,1.0935538217682,2.28778173206523,0,0,0,0.954670618015114,1.10717597753397,2.23651413839534,1.51207477150522,3.13632444021703,2.62035076495413,1.88810084938749,1.32245529160537,2.09404753587224,1.16653475962614,0,0,0.897099276263873,1.15820943319968,2.91676782516071,2.71235629303235,2.19642963138012,2.34714477291508,2.604087696879,0.838874755405687,0.966336483304024,0.288030006257865,0.948033361884535,2.02725215290164,0.924398614483445,1.03936658382236,0.895133478337407,0.198681354781265,0.480781798079875,0.738447635872886,0.302899349844443,0.533447646584999,0.604957110821043,0.292373642219257,0.192423683280659,0.116876902181569,0.680191150845634,0.221985953374065,0.0897138566094757,1.00730769818447,1.73870634628971,0.375364950902364,0.36630324853453,0.428736758158132,0,0.564751842617067,0.920650473014354,1.14579102687879,0.515559547031063,0.685082519770642,0,0,1.35096360967266,0,1.03552062350364,0.207574695168353,1.19707462020309,1.53660245178721,1.94485373654635,1.25767897576789,0.735374033800057,3.55594764482584,3.09052585858341,2.88827288632634,3.53776096469316,0.760437899670719,1.50901073108861,2.24739617927718,2.36893063898016,2.41228969613576,2.85776214769844,1.97003354106254,1.54327376370964,2.47251540481984,2.35518272215036,1.37147700954166,1.4198064492747,2.62279808942053,1.74415699958794,2.35273451038327,2.03075058940024,2.56099162021882,1.31534855718921,2.44447404922551,0.561142271657738,2.84724043498018,2.46261205938909,1.63692417267876,2.47898945897546,1.35034627686799,2.49810577937946,2.57324769289949,2.57845264857958,4.01705497344571,3.75005412503176,3.2461496986859
|short_description=p7@Ddr1
}}

Revision as of 14:25, 13 September 2013

Short description:p7@Ddr1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Ddr1_5end
Coexpression cluster:MCL_coexpression_mm9:427
Association with transcript: 0bp_to_ENSMUST00000135078_5end
EntrezGene:Ddr1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Ddr1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B728.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C214.17
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B813.84
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C316.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.44
Mouse Astrocytes, donor3.CNhs12107.11633-122C412.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E116.33
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C515.99
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C86.29
Mouse Microglia, donor2.CNhs12634.11736-123E811.14
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.77
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F54.85
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.87
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C62.38
eyeball, neonate N01.CNhs11140.1532-43E72.31
eyeball, neonate N02.CNhs11205.1551-44G82.34
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E910.15
heart, embryo E12.CNhs11015.353-12F57.04
heart, embryo E13.CNhs11013.376-3I99.54
heart, embryo E14.CNhs10597.403-26D410.18
heart, embryo E15.CNhs11017.431-16C810.82
heart, embryo E16.CNhs11021.457-17C610.34
heart, embryo E17.CNhs11025.479-18E511.63
heart, embryo E18.CNhs11030.1283-20G312.07
heart, neonate N00.CNhs11213.639-21E310.86
heart, neonate N03.CNhs11221.1349-25I29.38
heart, neonate N10.CNhs11118.749-24G15.25
heart, neonate N16.CNhs11209.782-15G13.32
heart, neonate N20.CNhs11127.821-26I62.49
heart, neonate N25.CNhs11196.1351-25D34.61
heart, neonate N30.CNhs11202.1390-42D26.04
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D82.96
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F72.66
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E92.47
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G71.89
kidney, neonate N10.CNhs11206.758-6D52.28
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B13.70
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F82.44
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A63.18
lung, embryo E18.CNhs10583.1287-20I66.90
lung, neonate N00.CNhs11224.640-42C64.10
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A44.75
lung, neonate N25.CNhs11119.1359-25C72.76
lung, neonate N30.CNhs11133.1394-42H23.76
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A33.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H75.34
ovary, neonate N00.CNhs11217.1299-22I44.40
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H31.21
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C15.16
spleen, embryo E18.CNhs11011.1271-21F25.93
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G32.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D53.14
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I52.71
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B72.35
testis, neonate N07.CNhs11222.726-26I42.60
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.41
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C64.02
whole body, neonate N06.CNhs10515.692-21D13.75
whole body, neonate N10.CNhs10518.761-6B43.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
oligodendrocyte precursor cell3.40e-078







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:35839242..35839319,-&oldid=2943735"