FFCP PHASE1:Mm9::chr17:31818106..31818119,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=57|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:31818106..31818119,+|id=chr17:31818106..31818119,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!3.06e-41!9;UBERON:0000019!3.06e-41!9;UBERON:0000047!3.06e-41!9;UBERON:0004088!3.06e-41!9;UBERON:0002104!3.06e-41!9;UBERON:0001456!3.06e-41!9;UBERON:0003072!3.06e-41!9;UBERON:0003071!3.06e-41!9;UBERON:0004128!3.06e-41!9;UBERON:0001444!1.58e-33!11;UBERON:0000020!1.24e-30!12;UBERON:0001032!1.24e-30!12;UBERON:0004456!1.24e-30!12;UBERON:0005085!3.49e-28!13;UBERON:0003056!5.15e-08!49|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.31e-86,9;UBERON:0000019,1.31e-86,9;UBERON:0000047,1.31e-86,9;UBERON:0010312,1.31e-86,9;UBERON:0004088,1.31e-86,9;UBERON:0002104,1.31e-86,9;UBERON:0001456,1.31e-86,9;UBERON:0003072,1.31e-86,9;UBERON:0004128,1.31e-86,9;UBERON:0003071,1.31e-86,9;UBERON:0001444,6.78e-71,11;UBERON:0000020,5.33e-65,12;UBERON:0001032,5.33e-65,12;UBERON:0004456,5.33e-65,12;UBERON:0000033,5.21e-60,13;UBERON:0005085,5.21e-60,13;UBERON:0007811,1.17e-21,36;UBERON:0000153,4.15e-18,43;UBERON:0003056,7.21e-16,49;UBERON:0002346,4.30e-12,64;UBERON:0003075,4.30e-12,64;UBERON:0007284,4.30e-12,64;UBERON:0010371,1.45e-10,73;UBERON:0010314,2.60e-08,92;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10441855886474,1.82168620147785,5.9774547152703,4.32149111532838,4.82255417074288,5.64702942956021,5.25266253167884,7.49613796477831,12.1590584247337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0.320919209591815,0,0.25347929989024,0,0,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr17:31818106..31818119,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=57 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:31818106..31818119,+ | |||
|id=chr17:31818106..31818119,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!3.06e-41!9;UBERON:0000019!3.06e-41!9;UBERON:0000047!3.06e-41!9;UBERON:0004088!3.06e-41!9;UBERON:0002104!3.06e-41!9;UBERON:0001456!3.06e-41!9;UBERON:0003072!3.06e-41!9;UBERON:0003071!3.06e-41!9;UBERON:0004128!3.06e-41!9;UBERON:0001444!1.58e-33!11;UBERON:0000020!1.24e-30!12;UBERON:0001032!1.24e-30!12;UBERON:0004456!1.24e-30!12;UBERON:0005085!3.49e-28!13;UBERON:0003056!5.15e-08!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.31e-86,9;UBERON:0000019,1.31e-86,9;UBERON:0000047,1.31e-86,9;UBERON:0010312,1.31e-86,9;UBERON:0004088,1.31e-86,9;UBERON:0002104,1.31e-86,9;UBERON:0001456,1.31e-86,9;UBERON:0003072,1.31e-86,9;UBERON:0004128,1.31e-86,9;UBERON:0003071,1.31e-86,9;UBERON:0001444,6.78e-71,11;UBERON:0000020,5.33e-65,12;UBERON:0001032,5.33e-65,12;UBERON:0004456,5.33e-65,12;UBERON:0000033,5.21e-60,13;UBERON:0005085,5.21e-60,13;UBERON:0007811,1.17e-21,36;UBERON:0000153,4.15e-18,43;UBERON:0003056,7.21e-16,49;UBERON:0002346,4.30e-12,64;UBERON:0003075,4.30e-12,64;UBERON:0007284,4.30e-12,64;UBERON:0010371,1.45e-10,73;UBERON:0010314,2.60e-08,92;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10441855886474,1.82168620147785,5.9774547152703,4.32149111532838,4.82255417074288,5.64702942956021,5.25266253167884,7.49613796477831,12.1590584247337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0.320919209591815,0,0.25347929989024,0,0,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr17:31818106..31818119,+ | |||
}} |
Revision as of 14:05, 13 September 2013
Short description: | p@chr17:31818106..31818119, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:31818106..31818119, + |
Coexpression cluster: | MCL_coexpression_mm9:57 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.31e-86 | 9 |
camera-type eye | 1.31e-86 | 9 |
simple eye | 1.31e-86 | 9 |
immature eye | 1.31e-86 | 9 |
ocular region | 1.31e-86 | 9 |
visual system | 1.31e-86 | 9 |
face | 1.31e-86 | 9 |
optic cup | 1.31e-86 | 9 |
optic vesicle | 1.31e-86 | 9 |
eye primordium | 1.31e-86 | 9 |
subdivision of head | 6.78e-71 | 11 |
sense organ | 5.33e-65 | 12 |
sensory system | 5.33e-65 | 12 |
entire sense organ system | 5.33e-65 | 12 |
head | 5.21e-60 | 13 |
ectodermal placode | 5.21e-60 | 13 |
craniocervical region | 1.17e-21 | 36 |
anterior region of body | 4.15e-18 | 43 |
pre-chordal neural plate | 7.21e-16 | 49 |
neurectoderm | 4.30e-12 | 64 |
neural plate | 4.30e-12 | 64 |
presumptive neural plate | 4.30e-12 | 64 |
ecto-epithelium | 1.45e-10 | 73 |
structure with developmental contribution from neural crest | 2.60e-08 | 92 |
ectoderm-derived structure | 4.90e-08 | 95 |
ectoderm | 4.90e-08 | 95 |
presumptive ectoderm | 4.90e-08 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.