FFCP PHASE1:Mm9::chr12:19960054..19960058,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=97|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:19960054..19960058,+|id=chr12:19960054..19960058,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,3.28e-58,3;CL:0000351,3.28e-58,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000473!6.55e-09!14;UBERON:0005156!7.28e-09!26;UBERON:0000990!7.28e-09!26;UBERON:0004176!1.23e-08!17;UBERON:0009196!1.23e-08!17;UBERON:0009117!1.23e-08!17;UBERON:0003133!2.45e-08!24;UBERON:0003135!3.44e-08!15;UBERON:0000991!4.92e-08!18;UBERON:0005564!4.92e-08!18;UBERON:0003101!1.47e-07!16;UBERON:0000079!1.47e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0000358,3.28e-58,3;UBERON:0000307,3.28e-58,3;UBERON:0007010,3.28e-58,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0.274228867211478,0,0,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0.258937883647172,0,0,0,0,0,0.352766121407114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0.136072998302656,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0,0,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0.329098041204242,0,0.469343416127421,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.258319646955462,0,0.234714477291508,0.2604087696879,0.209718688851422,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,1.99787358036658,2.9605572681127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr12:19960054..19960058,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=97 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:19960054..19960058,+ | |||
|id=chr12:19960054..19960058,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.28e-58,3;CL:0000351,3.28e-58,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!6.55e-09!14;UBERON:0005156!7.28e-09!26;UBERON:0000990!7.28e-09!26;UBERON:0004176!1.23e-08!17;UBERON:0009196!1.23e-08!17;UBERON:0009117!1.23e-08!17;UBERON:0003133!2.45e-08!24;UBERON:0003135!3.44e-08!15;UBERON:0000991!4.92e-08!18;UBERON:0005564!4.92e-08!18;UBERON:0003101!1.47e-07!16;UBERON:0000079!1.47e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,3.28e-58,3;UBERON:0000307,3.28e-58,3;UBERON:0007010,3.28e-58,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0.274228867211478,0,0,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0.258937883647172,0,0,0,0,0,0.352766121407114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0.136072998302656,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0,0,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0.329098041204242,0,0.469343416127421,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.258319646955462,0,0.234714477291508,0.2604087696879,0.209718688851422,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,1.99787358036658,2.9605572681127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr12:19960054..19960058,+ | |||
}} |
Revision as of 22:36, 12 September 2013
Short description: | p@chr12:19960054..19960058, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:19960054..19960058, + |
Coexpression cluster: | MCL_coexpression_mm9:97 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.28e-58 | 3 |
trophoblast cell | 3.28e-58 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 3.28e-58 | 3 |
blastula | 3.28e-58 | 3 |
cleaving embryo | 3.28e-58 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.