FFCP PHASE1:Hg19::chr3:132975986..132975997,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=S | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-21bp_to_uc003epl.2_5end | |association_with_transcript=-21bp_to_uc003epl.2_5end | ||
Revision as of 14:39, 9 July 2013
| Short description: | p1@uc003epl.2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_uc003epl.2_5end |
| Coexpression cluster: | C1250_leiomyoma_Mesenchymal_Olfactory_amygdala_carcinoid_fibrosarcoma_mesothelioma |
| Association with transcript: | -21bp_to_uc003epl.2_5end |
| EntrezGene: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@uc003epl.2 |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| amygdala | 7.14e-26 | 2 |
| uterus | 4.76e-22 | 21 |
| embryonic uterus | 4.27e-21 | 22 |
| internal female genitalia | 4.27e-21 | 22 |
| internal genitalia | 1.09e-18 | 25 |
| female reproductive organ | 5.98e-13 | 37 |
| female reproductive system | 5.98e-13 | 37 |
| female organism | 8.89e-12 | 41 |
| limbic system | 3.26e-11 | 5 |
| reproductive organ | 3.42e-10 | 48 |
| Ontology term | p-value | n |
|---|---|---|
| cell type benign neoplasm | 5.41e-147 | 3 |
| leiomyoma | 5.41e-147 | 3 |
| benign neoplasm | 1.30e-110 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
