FFCP PHASE1:Hg19::chr1:248020569..248020580,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=25893|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24150|TSSclassifier=S|UniProt=|association_with_transcript=-38bp_to_AK096188_5end|coexpression_cluster_id=C3960|description=CAGE_peak_6_at_TRIM58_5end|id=chr1:248020569..248020580,+|ontology_enrichment_celltype=CL:0000077!3.39e-14!19|ontology_enrichment_celltype_v019=CL:0000077;2.92e-19;19!CL:0000764;1.59e-11;2!CL:0000558;1.59e-11;2!CL:0000174;1.34e-07;3|ontology_enrichment_celltype_v019_2=CL:0000077,1.81e-19,19;CL:0000764,1.63e-11,2;CL:0000765,1.63e-11,2;CL:0000050,1.63e-11,2;CL:0000038,1.63e-11,2;CL:0000558,1.63e-11,2;CL:0000547,1.63e-11,2;CL:0000549,1.63e-11,2;CL:0000550,1.63e-11,2;CL:0000552,1.63e-11,2;CL:0000174,1.81e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:8692!1.86e-11!31;DOID:1240!1.10e-09!39;DOID:2531!1.68e-07!51;DOID:0060083!1.68e-07!51|ontology_enrichment_disease_v019=DOID:8692;4.00e-07;31|ontology_enrichment_disease_v019_2=DOID:8692,7.98e-07,31|ontology_enrichment_uberon=UBERON:0000178!6.49e-10!15;UBERON:0000179!6.49e-10!15;UBERON:0000463!6.49e-10!15|ontology_enrichment_uberon_v019=UBERON:0000178;1.22e-11;15!UBERON:0000179;1.22e-11;15!UBERON:0000463;1.22e-11;15!UBERON:0002390;1.42e-08;32|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.15e-11,15;UBERON:0000179,1.15e-11,15;UBERON:0000463,1.15e-11,15|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0.626909442956176,0,0,0.376627918784408,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,1.46800219667424,0,0,0.217010870715852,0.447830948479849,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.870627715885752,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0.560677600142307,1.06748995729705,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0.383382679165211,0,0.528290604079356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,1.74306691720059,1.19967589418468,0,0,0,0,0,0,0.868687840005475,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0.482561763430822,0,0,0.177561725313127,0.0821271560138091,0,0.232420756919918,0,0,0,0.114814448164607,0,0,0.451199612907412,0.15403067420883,0,0,0,0,0,0,0,0.541892875087706,0,0,0,0,3.50815802633495,2.3529190592241,0,0.984043937099117,0.650756789328606,0.515205058238611,0.27470839445503,0.41254749960294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.633322905892992,0,0,0,0,0,0,0.659006605437454,0,0,0,0.459446800413919,2.02979043692868,2.29391162142713,2.84823593587081,0.476463550915578,0.822724546172388,1.29694662238543,1.62009431171434,3.96562588147135,0,0,0,0,0,0.213425530045242,0.478278818186467,0.399158742865633,0.5745161103971,1.2700414963433,0,0.842391534340376,0,0,0,1.35433422241283,0.1605880751037,0,0,0,0.921722292925374,1.11838053946208,0,0.19538809540204,0.278406173895242,1.23087398947712,0.270455678475983,2.66457574398256,2.81974010175699,0,0,0.242721043499027,0,0,0.71623345421307,0.593929361665277,1.53580351049616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0,0,1.18193840883968,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.0769502585037971,2.62066728448103,0,0,0,0.957003479195758,0.366390373607449,1.06606955203727,0,0.627921025580099,0.831058409500782,0.225595660617181,0.392125068635479,0,1.3282761290693,0.635746315921515,0,0,0,0,0,0.176915129006678,0,0.889563386041866,0.494255755786011,0.208843899010911,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0.397429223405979,0.50648636764703,0,0.160317640503067,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57859264851974,0,0,0,0,0,0,0,0,1.44119953416961,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,4.7892076624995,0.164185041498678,0,0,0,0,0.517131825446202,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0,0,0,0.124192805882767,4.01211041315069,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0.449803112163605,0.310525913752519,0,0,0,0.601030435988874,0,0,0,0.537052785212442,0.46403375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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=25893 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24150 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-38bp_to_AK096188_5end | |||
|coexpression_cluster_id=C3960 | |||
|description=CAGE_peak_6_at_TRIM58_5end | |||
|id=chr1:248020569..248020580,+ | |||
|ontology_enrichment_celltype=CL:0000077!3.39e-14!19 | |||
|ontology_enrichment_celltype_v019=CL:0000077;2.92e-19;19!CL:0000764;1.59e-11;2!CL:0000558;1.59e-11;2!CL:0000174;1.34e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.81e-19,19;CL:0000764,1.63e-11,2;CL:0000765,1.63e-11,2;CL:0000050,1.63e-11,2;CL:0000038,1.63e-11,2;CL:0000558,1.63e-11,2;CL:0000547,1.63e-11,2;CL:0000549,1.63e-11,2;CL:0000550,1.63e-11,2;CL:0000552,1.63e-11,2;CL:0000174,1.81e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!1.86e-11!31;DOID:1240!1.10e-09!39;DOID:2531!1.68e-07!51;DOID:0060083!1.68e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.00e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,7.98e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0000178!6.49e-10!15;UBERON:0000179!6.49e-10!15;UBERON:0000463!6.49e-10!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.22e-11;15!UBERON:0000179;1.22e-11;15!UBERON:0000463;1.22e-11;15!UBERON:0002390;1.42e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.15e-11,15;UBERON:0000179,1.15e-11,15;UBERON:0000463,1.15e-11,15 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0.626909442956176,0,0,0.376627918784408,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,1.46800219667424,0,0,0.217010870715852,0.447830948479849,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.870627715885752,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0.560677600142307,1.06748995729705,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0.383382679165211,0,0.528290604079356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,1.74306691720059,1.19967589418468,0,0,0,0,0,0,0.868687840005475,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0.482561763430822,0,0,0.177561725313127,0.0821271560138091,0,0.232420756919918,0,0,0,0.114814448164607,0,0,0.451199612907412,0.15403067420883,0,0,0,0,0,0,0,0.541892875087706,0,0,0,0,3.50815802633495,2.3529190592241,0,0.984043937099117,0.650756789328606,0.515205058238611,0.27470839445503,0.41254749960294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.633322905892992,0,0,0,0,0,0,0.659006605437454,0,0,0,0.459446800413919,2.02979043692868,2.29391162142713,2.84823593587081,0.476463550915578,0.822724546172388,1.29694662238543,1.62009431171434,3.96562588147135,0,0,0,0,0,0.213425530045242,0.478278818186467,0.399158742865633,0.5745161103971,1.2700414963433,0,0.842391534340376,0,0,0,1.35433422241283,0.1605880751037,0,0,0,0.921722292925374,1.11838053946208,0,0.19538809540204,0.278406173895242,1.23087398947712,0.270455678475983,2.66457574398256,2.81974010175699,0,0,0.242721043499027,0,0,0.71623345421307,0.593929361665277,1.53580351049616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0,0,1.18193840883968,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.0769502585037971,2.62066728448103,0,0,0,0.957003479195758,0.366390373607449,1.06606955203727,0,0.627921025580099,0.831058409500782,0.225595660617181,0.392125068635479,0,1.3282761290693,0.635746315921515,0,0,0,0,0,0.176915129006678,0,0.889563386041866,0.494255755786011,0.208843899010911,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0.397429223405979,0.50648636764703,0,0.160317640503067,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57859264851974,0,0,0,0,0,0,0,0,1.44119953416961,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,4.7892076624995,0.164185041498678,0,0,0,0,0.517131825446202,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0,0,0,0.124192805882767,4.01211041315069,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0.449803112163605,0.310525913752519,0,0,0,0.601030435988874,0,0,0,0.537052785212442,0.464033759878494,0,0,0,0,1.26184898228651,0.192619830407303,1.07220795687463,0,0.906823702049089,0.694567422971502,1.95789363605174,2.32815493405934,1.54400723580486,1.53498834705095,1.76689145945881,2.31496845925098,0.675769762612291,0,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0.431299245586727,0,0,0,0.212574920101683,0,0.558644917973244,0,0,0,0,0.3062454773532,0.513833800771676,0,0,0,0.504143392443436,0.207471757392654,0,0,0,0,0,0,1.90691047733584,0.690359926060101,1.19349733269765,0,0,0,0,0.818859587550484,0,0.270150338473579,0,0,0.253663240775627,0.546974809018219,0,0,0,0,0,0,0,0,0.79832133146375,0,0,0.679697329768317,0.394636641377094,0,0.778619813244484,0.078493092850514,0.785577949580009,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0.218559560503957,0,0,0,0.392616934229891,0,0,0,0.0939839179798536,0.45120521581504,0,0.178553938605658,0,0,1.46067277649303,0,0,0,0.0679914901909147,0,0,0,0.462175628631418,0,0,0,0,0.101988829741982,0,0.275684698604535,0,0,0.535928260312357,0,0,0,0.23806443146374,0.0645889098360061,0,3.13969215225718,0.318235791390825,1.0105859447911,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p6@TRIM58 | |||
}} |
Revision as of 04:48, 12 September 2013
Short description: | p6@TRIM58 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_TRIM58_5end |
Coexpression cluster: | C3960_mesothelioma_cholangiocellular_Reticulocytes_thyroid_granulosa_papillary_Whole |
Association with transcript: | -38bp_to_AK096188_5end |
EntrezGene: | TRIM58 |
HGNC: | 24150 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.81e-19 | 19 |
erythroid lineage cell | 1.63e-11 | 2 |
erythroblast | 1.63e-11 | 2 |
megakaryocyte-erythroid progenitor cell | 1.63e-11 | 2 |
erythroid progenitor cell | 1.63e-11 | 2 |
reticulocyte | 1.63e-11 | 2 |
proerythroblast | 1.63e-11 | 2 |
basophilic erythroblast | 1.63e-11 | 2 |
polychromatophilic erythroblast | 1.63e-11 | 2 |
orthochromatic erythroblast | 1.63e-11 | 2 |
steroid hormone secreting cell | 1.81e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.15e-11 | 15 |
haemolymphatic fluid | 1.15e-11 | 15 |
organism substance | 1.15e-11 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.98e-07 | 31 |
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