FFCP PHASE1:Hg19::chr10:45476058..45476069,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=83937|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20793|TSSclassifier=N|UniProt=|association_with_transcript=-417bp_to_ENST00000465735_5end|description=CAGE_peak_5_at_RASSF4_5end|id=chr10:45476058..45476069,+|ontology_enrichment_celltype=CL:0002368!1.38e-17!13;CL:0002076!1.74e-16!43;CL:0002621!2.39e-12!3;CL:0000066!2.93e-12!254;CL:0002166!3.36e-12!3;CL:0000223!4.71e-11!59;CL:0002327!4.13e-09!4;CL:0000076!2.80e-07!62;CL:0002202!4.36e-07!9;CL:0002632!4.36e-07!9|ontology_enrichment_celltype_v019=CL:0002535;1.44e-09;2!CL:0002251;4.46e-08;20!CL:0000307;8.62e-07;3!CL:0002621;8.62e-07;3|ontology_enrichment_celltype_v019_2=CL:0002535,1.12e-09,2;CL:0002251,4.80e-08,20|ontology_enrichment_development_v019=CL:0000377;8.62e-07;3|ontology_enrichment_disease=DOID:1749!1.93e-30!14|ontology_enrichment_disease_v019=DOID:1749;1.29e-29;14!DOID:0060060;8.72e-18;1!DOID:0060061;8.72e-18;1!DOID:8691;8.72e-18;1|ontology_enrichment_disease_v019_2=DOID:1749,1.22e-29,14;DOID:0060060,4.44e-18,1;DOID:0060061,4.44e-18,1;DOID:8691,4.44e-18,1|ontology_enrichment_uberon=UBERON:0001949!2.39e-12!3;UBERON:0003343!2.24e-09!4;UBERON:0004785!2.24e-09!4;UBERON:0001708!2.96e-09!4;UBERON:0001704!2.96e-09!4;UBERON:0001911!4.13e-09!4;UBERON:0005333!4.13e-09!4;UBERON:0008425!4.13e-09!4;UBERON:0005311!4.13e-09!4;UBERON:0001004!2.11e-08!72;UBERON:0003729!1.42e-07!5;UBERON:0000365!4.40e-07!5|ontology_enrichment_uberon_v019=UBERON:0003343;1.33e-17;4!UBERON:0004785;1.33e-17;4!UBERON:0003729;4.10e-12;13!UBERON:0000974;4.55e-12;6!UBERON:0006955;1.44e-09;2!UBERON:0004801;1.44e-09;2!UBERON:0000161;1.79e-08;19!UBERON:0000166;1.79e-08;19!UBERON:0000344;4.46e-08;20!UBERON:0001949;8.62e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.33e-17,4;UBERON:0004785,1.33e-17,4;UBERON:0003729,4.60e-12,13;UBERON:0006955,1.12e-09,2;UBERON:0004801,1.12e-09,2;UBERON:0000344,4.80e-08,20;UBERON:0000974,1.33e-07,10;UBERON:0000166,2.31e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.152826811495903,0.328402357799783,0.157421562627358,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,0.545492241181669,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0.93733833986777,0.503946384596579,0.567100388969546,0.358234090811393,0.290633938513962,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.576570202095319,0.765676274967505,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,1.08890984861323,0.0941438007767792,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.891547074219827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48260564340311,0.86494757262552,0.939797545549098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489961987071888,1.65412492502765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,11.3732171245517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33702242903487,0,1.46742878817343,0.231051332300676,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0.178553938605658,6.70500256259814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325613074443898,0,0,0,0,0,0,0,0,0.320568492303233|short_description=p5@RASSF4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=83937 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20793 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-417bp_to_ENST00000465735_5end | |||
|description=CAGE_peak_5_at_RASSF4_5end | |||
|id=chr10:45476058..45476069,+ | |||
|ontology_enrichment_celltype=CL:0002368!1.38e-17!13;CL:0002076!1.74e-16!43;CL:0002621!2.39e-12!3;CL:0000066!2.93e-12!254;CL:0002166!3.36e-12!3;CL:0000223!4.71e-11!59;CL:0002327!4.13e-09!4;CL:0000076!2.80e-07!62;CL:0002202!4.36e-07!9;CL:0002632!4.36e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002535;1.44e-09;2!CL:0002251;4.46e-08;20!CL:0000307;8.62e-07;3!CL:0002621;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.12e-09,2;CL:0002251,4.80e-08,20 | |||
|ontology_enrichment_development_v019=CL:0000377;8.62e-07;3 | |||
|ontology_enrichment_disease=DOID:1749!1.93e-30!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.29e-29;14!DOID:0060060;8.72e-18;1!DOID:0060061;8.72e-18;1!DOID:8691;8.72e-18;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.22e-29,14;DOID:0060060,4.44e-18,1;DOID:0060061,4.44e-18,1;DOID:8691,4.44e-18,1 | |||
|ontology_enrichment_uberon=UBERON:0001949!2.39e-12!3;UBERON:0003343!2.24e-09!4;UBERON:0004785!2.24e-09!4;UBERON:0001708!2.96e-09!4;UBERON:0001704!2.96e-09!4;UBERON:0001911!4.13e-09!4;UBERON:0005333!4.13e-09!4;UBERON:0008425!4.13e-09!4;UBERON:0005311!4.13e-09!4;UBERON:0001004!2.11e-08!72;UBERON:0003729!1.42e-07!5;UBERON:0000365!4.40e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;1.33e-17;4!UBERON:0004785;1.33e-17;4!UBERON:0003729;4.10e-12;13!UBERON:0000974;4.55e-12;6!UBERON:0006955;1.44e-09;2!UBERON:0004801;1.44e-09;2!UBERON:0000161;1.79e-08;19!UBERON:0000166;1.79e-08;19!UBERON:0000344;4.46e-08;20!UBERON:0001949;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.33e-17,4;UBERON:0004785,1.33e-17,4;UBERON:0003729,4.60e-12,13;UBERON:0006955,1.12e-09,2;UBERON:0004801,1.12e-09,2;UBERON:0000344,4.80e-08,20;UBERON:0000974,1.33e-07,10;UBERON:0000166,2.31e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.152826811495903,0.328402357799783,0.157421562627358,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,0.545492241181669,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0.93733833986777,0.503946384596579,0.567100388969546,0.358234090811393,0.290633938513962,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.576570202095319,0.765676274967505,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,1.08890984861323,0.0941438007767792,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.891547074219827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48260564340311,0.86494757262552,0.939797545549098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489961987071888,1.65412492502765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,11.3732171245517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33702242903487,0,1.46742878817343,0.231051332300676,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0.178553938605658,6.70500256259814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325613074443898,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p5@RASSF4 | |||
}} |
Revision as of 13:28, 10 September 2013
Short description: | p5@RASSF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_RASSF4_5end |
Coexpression cluster: | NA |
Association with transcript: | -417bp_to_ENST00000465735_5end |
EntrezGene: | RASSF4 |
HGNC: | 20793 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.12e-09 | 2 |
epithelial cell of alimentary canal | 4.80e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.33e-17 | 4 |
respiratory system mucosa | 1.33e-17 | 4 |
mouth mucosa | 4.60e-12 | 13 |
uterine epithelium | 1.12e-09 | 2 |
cervix epithelium | 1.12e-09 | 2 |
mucosa | 4.80e-08 | 20 |
neck | 1.33e-07 | 10 |
oral opening | 2.31e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.22e-29 | 14 |
non-Hodgkin lymphoma | 4.44e-18 | 1 |
cutaneous T cell lymphoma | 4.44e-18 | 1 |
mycosis fungoides | 4.44e-18 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.