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FFCP PHASE1:Hg19::chr10:82049311..82049330,-: Difference between revisions

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{{FFCP
{{FFCP|DPIdataset=robustDPI|EntrezGene=4143|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6903|TSSclassifier=S|UniProt=|association_with_transcript=-18bp_to_ENST00000372206_5end|coexpression_cluster_id=C5|description=CAGE_peak_3_at_MAT1A_5end|id=chr10:82049311..82049330,-|ontology_enrichment_celltype=CL:0000181!5.06e-10!12;CL:0000417!5.06e-10!12;CL:0000668!5.06e-10!12;CL:0000414!5.06e-10!12;CL:0000412!5.06e-10!12;CL:0000182!5.06e-10!12;CL:0002619!4.60e-08!3|ontology_enrichment_celltype_v019=CL:0000182;2.40e-38;12|ontology_enrichment_celltype_v019_2=CL:0000182,2.40e-38,12;CL:0000223,1.42e-09,58|ontology_enrichment_development_v019=UBERON:0004161;8.75e-31;11!UBERON:0009497;5.27e-26;13!UBERON:0001041;8.15e-15;30!UBERON:0003104;9.76e-11;31!CL:0000223;6.66e-07;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000949!6.29e-15!45;UBERON:0002368!2.30e-14!35;UBERON:0002530!3.93e-11!59;UBERON:0005172!6.41e-11!55;UBERON:0005173!6.41e-11!55;UBERON:0005177!1.37e-10!107;UBERON:0003296!2.30e-10!4;UBERON:0010133!2.30e-10!4;UBERON:0007023!7.42e-10!115;UBERON:0002107!9.36e-10!19;UBERON:0006925!9.36e-10!19;UBERON:0008836!9.36e-10!19;UBERON:0005057!1.96e-09!26;UBERON:0002417!2.31e-09!61;UBERON:0000916!2.31e-09!61;UBERON:0009497!1.89e-08!25;UBERON:0000015!1.89e-08!25;UBERON:0002423!1.89e-08!25;UBERON:0006235!1.89e-08!25;UBERON:0004161!1.89e-08!25;UBERON:0001041!3.22e-08!98;UBERON:0008835!3.79e-08!22;UBERON:0003894!3.79e-08!22;UBERON:0006947!4.60e-08!3;UBERON:0004054!4.60e-08!3;UBERON:0009854!1.05e-07!23;UBERON:0002365!1.46e-07!31;UBERON:0002330!1.46e-07!31;UBERON:0004921!2.50e-07!129;UBERON:0004185!2.50e-07!129;UBERON:0009569!3.97e-07!113;UBERON:0007499!6.21e-07!25|ontology_enrichment_uberon_v019=UBERON:0002107;9.67e-40;19!UBERON:0006925;9.67e-40;19!UBERON:0002423;6.13e-30;25!UBERON:0002368;2.14e-24;33!UBERON:0002365;3.30e-23;31!UBERON:0002330;3.30e-23;31!UBERON:0000949;1.03e-21;43!UBERON:0001301;5.05e-11;1!UBERON:0002530;4.11e-09;57!UBERON:0005172;5.77e-09;52!UBERON:0005173;5.77e-09;52!UBERON:0002417;2.41e-08;58!UBERON:0000916;2.41e-08;58|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.68e-40,19;UBERON:0006925,9.68e-40,19;UBERON:0008836,9.68e-40,19;UBERON:0008835,3.58e-34,22;UBERON:0003894,3.58e-34,22;UBERON:0009854,1.22e-32,23;UBERON:0007499,6.13e-30,25;UBERON:0009497,6.13e-30,25;UBERON:0000015,6.13e-30,25;UBERON:0002423,6.13e-30,25;UBERON:0006235,6.13e-30,25;UBERON:0004161,6.13e-30,25;UBERON:0009856,9.60e-29,26;UBERON:0002368,7.15e-26,35;UBERON:0000949,4.90e-24,45;UBERON:0002365,6.36e-24,31;UBERON:0002330,6.36e-24,31;UBERON:0005172,2.29e-16,54;UBERON:0005173,2.29e-16,54;UBERON:0003929,2.58e-16,54;UBERON:0002530,9.06e-15,59;UBERON:0002417,1.38e-14,60;UBERON:0000916,1.38e-14,60;UBERON:0005911,1.98e-12,82;UBERON:0005177,8.90e-12,101;UBERON:0001301,5.05e-11,1;UBERON:0001041,1.48e-09,87;UBERON:0009569,1.14e-08,112;UBERON:0004921,4.90e-08,118;UBERON:0003914,9.34e-07,117|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568676929949686,0,0,0,0,0.447830948479849,0.647787332037959,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.348581828608555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,100.136477509246,30.4676437170064,71.4855787084499,0,4.42758378755209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.518738901987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.0088922641049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06246791284767,0,0,0,0,0.18714054040822,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84666373047609,0.0927680981618513,0,0.260427761085233,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0.139423744278603,0.0769502585037971,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0.242780379534093,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4055934451841,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0.19871461170299,0,0,0,0.213452994739353,0,0.288180834308212,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.599037001496973,0,0,0,0,1.16495949527454,8.50858368918015,8.40641755487898,7.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|DPIdataset=robustDPI
|EntrezGene=4143
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=6903
|TSSclassifier=S
|UniProt=
|association_with_transcript=-18bp_to_ENST00000372206_5end
|coexpression_cluster_id=C5
|description=CAGE_peak_3_at_MAT1A_5end
|id=chr10:82049311..82049330,-
|ontology_enrichment_celltype=CL:0000181!5.06e-10!12;CL:0000417!5.06e-10!12;CL:0000668!5.06e-10!12;CL:0000414!5.06e-10!12;CL:0000412!5.06e-10!12;CL:0000182!5.06e-10!12;CL:0002619!4.60e-08!3
|ontology_enrichment_celltype_v019=CL:0000182;2.40e-38;12
|ontology_enrichment_celltype_v019_2=CL:0000182,2.40e-38,12;CL:0000223,1.42e-09,58
|ontology_enrichment_development_v019=UBERON:0004161;8.75e-31;11!UBERON:0009497;5.27e-26;13!UBERON:0001041;8.15e-15;30!UBERON:0003104;9.76e-11;31!CL:0000223;6.66e-07;58
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000949!6.29e-15!45;UBERON:0002368!2.30e-14!35;UBERON:0002530!3.93e-11!59;UBERON:0005172!6.41e-11!55;UBERON:0005173!6.41e-11!55;UBERON:0005177!1.37e-10!107;UBERON:0003296!2.30e-10!4;UBERON:0010133!2.30e-10!4;UBERON:0007023!7.42e-10!115;UBERON:0002107!9.36e-10!19;UBERON:0006925!9.36e-10!19;UBERON:0008836!9.36e-10!19;UBERON:0005057!1.96e-09!26;UBERON:0002417!2.31e-09!61;UBERON:0000916!2.31e-09!61;UBERON:0009497!1.89e-08!25;UBERON:0000015!1.89e-08!25;UBERON:0002423!1.89e-08!25;UBERON:0006235!1.89e-08!25;UBERON:0004161!1.89e-08!25;UBERON:0001041!3.22e-08!98;UBERON:0008835!3.79e-08!22;UBERON:0003894!3.79e-08!22;UBERON:0006947!4.60e-08!3;UBERON:0004054!4.60e-08!3;UBERON:0009854!1.05e-07!23;UBERON:0002365!1.46e-07!31;UBERON:0002330!1.46e-07!31;UBERON:0004921!2.50e-07!129;UBERON:0004185!2.50e-07!129;UBERON:0009569!3.97e-07!113;UBERON:0007499!6.21e-07!25
|ontology_enrichment_uberon_v019=UBERON:0002107;9.67e-40;19!UBERON:0006925;9.67e-40;19!UBERON:0002423;6.13e-30;25!UBERON:0002368;2.14e-24;33!UBERON:0002365;3.30e-23;31!UBERON:0002330;3.30e-23;31!UBERON:0000949;1.03e-21;43!UBERON:0001301;5.05e-11;1!UBERON:0002530;4.11e-09;57!UBERON:0005172;5.77e-09;52!UBERON:0005173;5.77e-09;52!UBERON:0002417;2.41e-08;58!UBERON:0000916;2.41e-08;58
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.68e-40,19;UBERON:0006925,9.68e-40,19;UBERON:0008836,9.68e-40,19;UBERON:0008835,3.58e-34,22;UBERON:0003894,3.58e-34,22;UBERON:0009854,1.22e-32,23;UBERON:0007499,6.13e-30,25;UBERON:0009497,6.13e-30,25;UBERON:0000015,6.13e-30,25;UBERON:0002423,6.13e-30,25;UBERON:0006235,6.13e-30,25;UBERON:0004161,6.13e-30,25;UBERON:0009856,9.60e-29,26;UBERON:0002368,7.15e-26,35;UBERON:0000949,4.90e-24,45;UBERON:0002365,6.36e-24,31;UBERON:0002330,6.36e-24,31;UBERON:0005172,2.29e-16,54;UBERON:0005173,2.29e-16,54;UBERON:0003929,2.58e-16,54;UBERON:0002530,9.06e-15,59;UBERON:0002417,1.38e-14,60;UBERON:0000916,1.38e-14,60;UBERON:0005911,1.98e-12,82;UBERON:0005177,8.90e-12,101;UBERON:0001301,5.05e-11,1;UBERON:0001041,1.48e-09,87;UBERON:0009569,1.14e-08,112;UBERON:0004921,4.90e-08,118;UBERON:0003914,9.34e-07,117
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|short_description=p3@MAT1A
}}

Revision as of 14:39, 10 September 2013

Short description:p3@MAT1A
Species:Human (Homo sapiens)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_MAT1A_5end
Coexpression cluster:C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas
Association with transcript: -18bp_to_ENST00000372206_5end
EntrezGene:MAT1A
HGNC: 6903
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data








Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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