FFCP PHASE1:Hg19::chr10:134227398..134227410,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C68|description=CAGE_peak_at_chr10:134227398..134227410,+|id=chr10:134227398..134227410,+|ontology_enrichment_celltype=CL:0000349!5.08e-20!3;CL:0002577!5.08e-20!3;CL:0002536!1.33e-13!2;CL:0002537!2.65e-12!5|ontology_enrichment_celltype_v019=CL:0000349;2.01e-73;19!CL:0002577;3.36e-66;3!CL:0002537;1.70e-40;5!CL:0002536;3.06e-12;2!CL:0002541;1.35e-08;3|ontology_enrichment_celltype_v019_2=CL:0000349,1.74e-73,19;CL:0002577,2.41e-66,3;CL:0002537,1.70e-40,5;CL:0002536,2.90e-12,2;CL:0002541,1.40e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:178!1.18e-07!1;DOID:326!1.18e-07!1;DOID:3978!1.18e-07!1;DOID:3394!1.18e-07!1;DOID:5844!1.18e-07!1;DOID:0050619!3.84e-07!1;DOID:1357!3.84e-07!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!1.38e-43!14;UBERON:0000158!1.38e-43!14;UBERON:0001987!1.79e-25!4;UBERON:0004340!1.79e-25!4;UBERON:0000478!1.10e-24!24;UBERON:0000305!8.62e-23!7;UBERON:0003124!2.00e-22!7;UBERON:0004871!6.39e-20!8;UBERON:0004923!2.37e-09!57;UBERON:0000995!3.18e-07!21;UBERON:0001764!3.84e-07!1;UBERON:0001825!3.84e-07!1;UBERON:0005795!6.97e-07!22;UBERON:0003975!6.97e-07!22|ontology_enrichment_uberon_v019=UBERON:0000478;3.63e-58;24!UBERON:0005631;6.36e-55;10!UBERON:0000158;6.36e-55;10!UBERON:0000305;1.24e-50;7!UBERON:0001987;6.64e-50;4!UBERON:0003124;1.35e-08;3!UBERON:0000920;1.35e-08;3!UBERON:0000077;5.18e-08;27|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.22e-99,14;UBERON:0000158,1.22e-99,14;UBERON:0000478,3.25e-58,24;UBERON:0000305,1.16e-50,7;UBERON:0003124,2.49e-50,7;UBERON:0001987,5.16e-50,4;UBERON:0004340,5.16e-50,4;UBERON:0004871,2.03e-44,8;UBERON:0004923,3.48e-21,66;UBERON:0000995,3.80e-10,21;UBERON:0005795,1.03e-09,22;UBERON:0003975,1.03e-09,22;UBERON:0004175,1.27e-08,25;UBERON:0000920,1.40e-08,3;UBERON:0000077,1.63e-07,29|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,1.31883489114227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.195801157462741,0,0,0,0,3.33440328590885,1.66435439510497,7.55975733324201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3874448473769,8.01804638248124,11.0577852755724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0.482385754501632,0,0,0,0,0,0.278847488557207,0,0,0,0,0,1.27600463892768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275684698604535,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:134227398..134227410,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_at_chr10:134227398..134227410,+ | |||
|id=chr10:134227398..134227410,+ | |||
|ontology_enrichment_celltype=CL:0000349!5.08e-20!3;CL:0002577!5.08e-20!3;CL:0002536!1.33e-13!2;CL:0002537!2.65e-12!5 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.01e-73;19!CL:0002577;3.36e-66;3!CL:0002537;1.70e-40;5!CL:0002536;3.06e-12;2!CL:0002541;1.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.74e-73,19;CL:0002577,2.41e-66,3;CL:0002537,1.70e-40,5;CL:0002536,2.90e-12,2;CL:0002541,1.40e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:178!1.18e-07!1;DOID:326!1.18e-07!1;DOID:3978!1.18e-07!1;DOID:3394!1.18e-07!1;DOID:5844!1.18e-07!1;DOID:0050619!3.84e-07!1;DOID:1357!3.84e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.38e-43!14;UBERON:0000158!1.38e-43!14;UBERON:0001987!1.79e-25!4;UBERON:0004340!1.79e-25!4;UBERON:0000478!1.10e-24!24;UBERON:0000305!8.62e-23!7;UBERON:0003124!2.00e-22!7;UBERON:0004871!6.39e-20!8;UBERON:0004923!2.37e-09!57;UBERON:0000995!3.18e-07!21;UBERON:0001764!3.84e-07!1;UBERON:0001825!3.84e-07!1;UBERON:0005795!6.97e-07!22;UBERON:0003975!6.97e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;3.63e-58;24!UBERON:0005631;6.36e-55;10!UBERON:0000158;6.36e-55;10!UBERON:0000305;1.24e-50;7!UBERON:0001987;6.64e-50;4!UBERON:0003124;1.35e-08;3!UBERON:0000920;1.35e-08;3!UBERON:0000077;5.18e-08;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.22e-99,14;UBERON:0000158,1.22e-99,14;UBERON:0000478,3.25e-58,24;UBERON:0000305,1.16e-50,7;UBERON:0003124,2.49e-50,7;UBERON:0001987,5.16e-50,4;UBERON:0004340,5.16e-50,4;UBERON:0004871,2.03e-44,8;UBERON:0004923,3.48e-21,66;UBERON:0000995,3.80e-10,21;UBERON:0005795,1.03e-09,22;UBERON:0003975,1.03e-09,22;UBERON:0004175,1.27e-08,25;UBERON:0000920,1.40e-08,3;UBERON:0000077,1.63e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,1.31883489114227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.195801157462741,0,0,0,0,3.33440328590885,1.66435439510497,7.55975733324201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3874448473769,8.01804638248124,11.0577852755724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0.482385754501632,0,0,0,0,0,0.278847488557207,0,0,0,0,0,1.27600463892768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275684698604535,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:134227398..134227410,+ | |||
}} |
Revision as of 12:25, 10 September 2013
Short description: | p@chr10:134227398..134227410, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:134227398..134227410, + |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.74e-73 | 19 |
placental epithelial cell | 2.41e-66 | 3 |
amnion mesenchymal stem cell | 1.70e-40 | 5 |
amniotic epithelial cell | 2.90e-12 | 2 |
chorionic membrane mesenchymal stem cell | 1.40e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.22e-99 | 14 |
membranous layer | 1.22e-99 | 14 |
extraembryonic structure | 3.25e-58 | 24 |
amnion | 1.16e-50 | 7 |
chorion | 2.49e-50 | 7 |
placenta | 5.16e-50 | 4 |
allantois | 5.16e-50 | 4 |
somatic layer of lateral plate mesoderm | 2.03e-44 | 8 |
organ component layer | 3.48e-21 | 66 |
uterus | 3.80e-10 | 21 |
embryonic uterus | 1.03e-09 | 22 |
internal female genitalia | 1.03e-09 | 22 |
internal genitalia | 1.27e-08 | 25 |
egg chorion | 1.40e-08 | 3 |
mixed endoderm/mesoderm-derived structure | 1.63e-07 | 29 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.