FFCP PHASE1:Hg19::chr11:2159814..2159825,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=W|UniProt=|association_with_transcript=-189bp_to_BC017277_5end|coexpression_cluster_id=C172|description=CAGE_peak_14_at_BC017277_5end|id=chr11:2159814..2159825,+|ontology_enrichment_celltype=CL:0000349!3.43e-07!3;CL:0002577!3.43e-07!3;CL:0002541!8.29e-07!3|ontology_enrichment_celltype_v019=CL:0000349;7.11e-34;19!CL:0002577;3.99e-17;3!CL:0002536;3.00e-12;2!CL:0002575;3.35e-12;2!CL:0002537;6.91e-11;5!CL:0002541;8.34e-09;3!CL:0000182;2.40e-07;12|ontology_enrichment_celltype_v019_2=CL:0000349,5.89e-34,19;CL:0002577,2.95e-17,3;CL:0002536,2.84e-12,2;CL:0002575,3.35e-12,2;CL:0002537,7.14e-11,5;CL:0002541,8.35e-09,3;CL:0000182,2.18e-07,12|ontology_enrichment_development_v019=UBERON:0004161;2.88e-12;11!UBERON:0009497;2.41e-10;13!UBERON:0003104;1.41e-07;31!UBERON:0000358;4.83e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!1.09e-19!14;UBERON:0000158!1.09e-19!14;UBERON:0000478!2.37e-16!24;UBERON:0003124!4.10e-14!7;UBERON:0001987!5.72e-09!4;UBERON:0004340!5.72e-09!4;UBERON:0000305!9.23e-08!7;UBERON:0000476!8.29e-07!3;UBERON:0000920!8.29e-07!3|ontology_enrichment_uberon_v019=UBERON:0000478;6.01e-37;24!UBERON:0005631;3.01e-27;10!UBERON:0000158;3.01e-27;10!UBERON:0001987;3.91e-22;4!UBERON:0000305;3.75e-20;7!UBERON:0003124;8.34e-09;3!UBERON:0000920;8.34e-09;3!UBERON:0002107;5.39e-07;19!UBERON:0006925;5.39e-07;19!UBERON:0002426;6.99e-07;1!UBERON:0003831;6.99e-07;1!UBERON:0003898;6.99e-07;1!UBERON:0004830;6.99e-07;1!UBERON:0003830;6.99e-07;1!UBERON:0005175;6.99e-07;1!UBERON:0001774;6.99e-07;1!UBERON:0001103;6.99e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.52e-46,14;UBERON:0000158,1.52e-46,14;UBERON:0000478,5.68e-37,24;UBERON:0003124,2.17e-28,7;UBERON:0001987,3.32e-22,4;UBERON:0004340,3.32e-22,4;UBERON:0000305,3.75e-20,7;UBERON:0004871,1.31e-17,8;UBERON:0004923,8.16e-10,66;UBERON:0000920,8.35e-09,3;UBERON:0002107,5.04e-07,19;UBERON:0006925,5.04e-07,19;UBERON:0008836,5.04e-07,19;UBERON:0002426,7.39e-07,1;UBERON:0003831,7.39e-07,1;UBERON:0003898,7.39e-07,1;UBERON:0004830,7.39e-07,1;UBERON:0003830,7.39e-07,1;UBERON:0005175,7.39e-07,1;UBERON:0001774,7.39e-07,1;UBERON:0001103,7.39e-07,1;UBERON:0010084,7.39e-07,1|phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0,0,0,0.697801167972428,5.67947567538448,5.80287352102598,0.123766352960047,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454072282934794,1.15235184896,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,0,0.494533858557114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0.348581828608555,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45976877086227,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,7.5967024754802,0.823240336780769,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,0,0.542530047399471,0.207970861530807,0,0,0,0,0,1.03473071292505,0,0,0,3.72022199179207,7.54915532383883,0,0,0,1.81876542867756,3.32870879020994,13.9099534931653,0,0,0,0,0,0,0,0,0,0,0,0,1.57117284469109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.309123034943167,0,0,0,0,0,0.193341436584244,0,0.15350367472613,0.275673144969061,0,0,0.0852266274161009,1.33548053470106,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0.855877976067841,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0,0,0,0,0,0,0,0,0.282431402330337,0.43050537267123,0,0,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,11.2209907826714,5.04839957415486,11.0577852755724,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,15.3120556671321,0.183195186803725,36.7793995452858,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,0,0,0,0,0,0,0,4.01288823649394,0,0,0,0,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0.799238438328521,0,0,7.89336990165037,0,0,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0.604651252380536,0,0,4.09672547997563,2.39005989305383,2.62873821031321,1.67326718575073,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.105600336519406,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-189bp_to_BC017277_5end | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_14_at_BC017277_5end | |||
|id=chr11:2159814..2159825,+ | |||
|ontology_enrichment_celltype=CL:0000349!3.43e-07!3;CL:0002577!3.43e-07!3;CL:0002541!8.29e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000349;7.11e-34;19!CL:0002577;3.99e-17;3!CL:0002536;3.00e-12;2!CL:0002575;3.35e-12;2!CL:0002537;6.91e-11;5!CL:0002541;8.34e-09;3!CL:0000182;2.40e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.89e-34,19;CL:0002577,2.95e-17,3;CL:0002536,2.84e-12,2;CL:0002575,3.35e-12,2;CL:0002537,7.14e-11,5;CL:0002541,8.35e-09,3;CL:0000182,2.18e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.88e-12;11!UBERON:0009497;2.41e-10;13!UBERON:0003104;1.41e-07;31!UBERON:0000358;4.83e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.09e-19!14;UBERON:0000158!1.09e-19!14;UBERON:0000478!2.37e-16!24;UBERON:0003124!4.10e-14!7;UBERON:0001987!5.72e-09!4;UBERON:0004340!5.72e-09!4;UBERON:0000305!9.23e-08!7;UBERON:0000476!8.29e-07!3;UBERON:0000920!8.29e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;6.01e-37;24!UBERON:0005631;3.01e-27;10!UBERON:0000158;3.01e-27;10!UBERON:0001987;3.91e-22;4!UBERON:0000305;3.75e-20;7!UBERON:0003124;8.34e-09;3!UBERON:0000920;8.34e-09;3!UBERON:0002107;5.39e-07;19!UBERON:0006925;5.39e-07;19!UBERON:0002426;6.99e-07;1!UBERON:0003831;6.99e-07;1!UBERON:0003898;6.99e-07;1!UBERON:0004830;6.99e-07;1!UBERON:0003830;6.99e-07;1!UBERON:0005175;6.99e-07;1!UBERON:0001774;6.99e-07;1!UBERON:0001103;6.99e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.52e-46,14;UBERON:0000158,1.52e-46,14;UBERON:0000478,5.68e-37,24;UBERON:0003124,2.17e-28,7;UBERON:0001987,3.32e-22,4;UBERON:0004340,3.32e-22,4;UBERON:0000305,3.75e-20,7;UBERON:0004871,1.31e-17,8;UBERON:0004923,8.16e-10,66;UBERON:0000920,8.35e-09,3;UBERON:0002107,5.04e-07,19;UBERON:0006925,5.04e-07,19;UBERON:0008836,5.04e-07,19;UBERON:0002426,7.39e-07,1;UBERON:0003831,7.39e-07,1;UBERON:0003898,7.39e-07,1;UBERON:0004830,7.39e-07,1;UBERON:0003830,7.39e-07,1;UBERON:0005175,7.39e-07,1;UBERON:0001774,7.39e-07,1;UBERON:0001103,7.39e-07,1;UBERON:0010084,7.39e-07,1 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0,0,0,0.697801167972428,5.67947567538448,5.80287352102598,0.123766352960047,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454072282934794,1.15235184896,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,0,0.494533858557114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0.348581828608555,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45976877086227,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,7.5967024754802,0.823240336780769,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,0,0.542530047399471,0.207970861530807,0,0,0,0,0,1.03473071292505,0,0,0,3.72022199179207,7.54915532383883,0,0,0,1.81876542867756,3.32870879020994,13.9099534931653,0,0,0,0,0,0,0,0,0,0,0,0,1.57117284469109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.309123034943167,0,0,0,0,0,0.193341436584244,0,0.15350367472613,0.275673144969061,0,0,0.0852266274161009,1.33548053470106,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0.855877976067841,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0,0,0,0,0,0,0,0,0.282431402330337,0.43050537267123,0,0,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,11.2209907826714,5.04839957415486,11.0577852755724,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,15.3120556671321,0.183195186803725,36.7793995452858,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,0,0,0,0,0,0,0,4.01288823649394,0,0,0,0,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0.799238438328521,0,0,7.89336990165037,0,0,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0.604651252380536,0,0,4.09672547997563,2.39005989305383,2.62873821031321,1.67326718575073,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,13.2506888912221,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20008329398946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596748666348824,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12885688390333,0,0,0,0,0,0,0,0,1.12108865325516,0,0,0,0.428859265059938,0,0,1.21700790611806,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0.121917924982269,0,0,2.3196288626764,0,0,2.98426162742052,0,0,0,0,0,0.874238242015829,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,4.76128862927481,0,0.0620747142958579,0,0,0.606351566874658,0,16.0849651510082,0,0,1.33064142618405,0.325613074443898,0,0,0.269475606319761,7.03922827210363,0,0.406896178315738,0,0,0 | |||
|short_description=p14@BC017277 | |||
}} |
Revision as of 17:12, 10 September 2013
Short description: | p14@BC017277 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_BC017277_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -189bp_to_BC017277_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.89e-34 | 19 |
placental epithelial cell | 2.95e-17 | 3 |
amniotic epithelial cell | 2.84e-12 | 2 |
central nervous system pericyte | 3.35e-12 | 2 |
amnion mesenchymal stem cell | 7.14e-11 | 5 |
chorionic membrane mesenchymal stem cell | 8.35e-09 | 3 |
hepatocyte | 2.18e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.52e-46 | 14 |
membranous layer | 1.52e-46 | 14 |
extraembryonic structure | 5.68e-37 | 24 |
chorion | 2.17e-28 | 7 |
placenta | 3.32e-22 | 4 |
allantois | 3.32e-22 | 4 |
amnion | 3.75e-20 | 7 |
somatic layer of lateral plate mesoderm | 1.31e-17 | 8 |
organ component layer | 8.16e-10 | 66 |
egg chorion | 8.35e-09 | 3 |
liver | 5.04e-07 | 19 |
digestive gland | 5.04e-07 | 19 |
liver bud | 5.04e-07 | 19 |
chest muscle | 7.39e-07 | 1 |
respiratory system muscle | 7.39e-07 | 1 |
skeletal muscle of trunk | 7.39e-07 | 1 |
respiratory system skeletal muscle | 7.39e-07 | 1 |
thoracic segment muscle | 7.39e-07 | 1 |
chest organ | 7.39e-07 | 1 |
muscle of trunk | 7.39e-07 | 1 |
diaphragm | 7.39e-07 | 1 |
future diaphragm | 7.39e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.