FFCP PHASE1:Hg19::chr11:57298187..57298243,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26519|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11814|TSSclassifier=S|UniProt=P62072|association_with_transcript=0bp_to_ENST00000257245,ENST00000525158,NM_012456,uc001nkm.1_5end|description=CAGE_peak_1_at_TIMM10_5end|id=chr11:57298187..57298243,-|ontology_enrichment_celltype=CL:0000012!1.30e-20!682;CL:0000548!1.43e-20!679;CL:0000004!1.43e-20!679;CL:0000255!1.43e-20!679;CL:0000066!3.36e-14!254;CL:0002321!5.14e-13!248;CL:0000220!1.29e-12!246;CL:0000003!2.38e-11!722;CL:0000144!2.74e-10!625;CL:0000063!2.72e-09!578;CL:0000222!8.42e-08!119|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000066,2.23e-14,253;CL:0002321,3.21e-13,250;CL:0000222,5.71e-08,121|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:14566!7.42e-14!239;DOID:162!1.22e-13!235;DOID:2531!5.29e-08!51;DOID:0060083!5.29e-08!51;DOID:0050686!2.44e-07!137;DOID:0050687!5.06e-07!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:14566,7.42e-14,239;DOID:162,1.22e-13,235;DOID:2531,5.29e-08,51;DOID:0060083,5.29e-08,51;DOID:0050686,2.44e-07,137;DOID:0050687,5.06e-07,143|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0000490,4.61e-07,148;UBERON:0002100,5.86e-07,199|phase1_expression=42.8760975078514,37.2534911570311,18.4650269365722,43.0315182918461,37.5447319318922,53.2126499701225,93.7209549222749,36.0080327853294,44.6627424221724,93.3788958705734,157.005262793796,46.964895007987,24.0027950187893,14.4806632963255,30.1571611912403,38.994858494203,31.3401154572468,35.7851944289813,29.2759679274304,48.8790600564848,71.8082433179771,42.943296842498,32.9171385200715,43.2523183230314,45.6975208125082,39.8113843946826,45.6479277341698,46.2819394124434,17.7013924582007,12.2825407391108,4.79929982279836,79.9896465296667,67.470125806328,71.7322779723568,68.1711365106654,55.0194929726321,31.7088474481635,6.64794490238253,5.81578897663411,7.16135873362311,18.5849843619137,15.546895968911,13.3939295169777,11.1956643860265,7.935394817465,9.94594650870046,9.76201955003875,10.6903650885675,9.29119112685311,8.63077176966451,10.7587496742222,12.7700404139836,8.27389633767885,7.74581620300591,10.8341189275473,9.78860165621544,10.3704337021981,15.2811969422658,11.6311879100943,8.02322567690234,8.95071976118658,7.25672860410775,7.97854630486527,11.5080682643827,12.1887880224005,8.5107783703671,9.34233373493363,10.5524439407832,4.69334626578181,12.1625753034865,9.08099253950053,8.10210799172642,16.1395817594851,19.8579969133225,21.2604299965044,25.5783547520219,10.89587722121,16.8198119982487,9.16135844173357,34.4865419926911,23.4721679094926,29.2262646023414,36.9592113368778,30.5837622306794,37.3593886622693,48.2205151500153,49.6491023924655,33.9103939573145,41.6458269854463,44.8405264631621,14.7995371968457,7.6340834618222,8.79228424688026,13.2171328579026,22.4203425192614,58.4712668200671,4.91774425284583,8.25322601773246,4.72883447698871,17.8889550068026,16.9479578649467,14.6768819777767,17.534405556712,16.711568532776,10.900418576569,14.8427709371026,11.1029584143656,22.9283462308959,24.4511573412571,24.8301235951551,22.1080014228679,17.0983820583681,12.159498179289,16.8550721696519,18.8163942848958,21.1888470844449,18.3945836928922,22.3357839563709,9.61474829674111,28.3523218748446,23.4390043388311,33.2658215556931,30.1150238155546,28.5410142874353,21.2382235138988,24.8616114646218,23.8127119107104,4.63695509416885,7.75576567772171,6.51709817472595,14.6284119788377,40.2420515822182,21.225185266026,48.0714072671473,45.1204119572301,47.9441977760327,40.5595832996061,32.6045363102766,23.8227739253451,55.2106199681784,28.1071314218003,19.6468613246569,60.1087225682695,69.3366908006883,32.779286759123,23.8557740099996,40.6851359187727,11.2090593423511,29.1717404497865,19.3157900691374,37.1685701775739,47.3129027308368,34.3669096591518,67.8369530308812,43.2084419296203,58.3250248912943,57.4736157976229,23.2575083252396,16.7210143462754,11.7152214467635,36.2546385398232,57.780680034607,44.9074185888632,36.398644954241,46.9882329771421,18.5743434830886,24.0246428710002,22.5222960966644,95.0563152288476,23.7316414892032,41.403594128272,5.27121669744253,0,37.5040884842579,28.8243731983285,28.618495636195,14.8298282510805,9.75244510545967,27.3094654292735,59.4318256150846,25.6197589751292,66.8469056210503,13.0708634867902,30.9834545760283,45.1154852593146,16.6493170409425,18.43762958336,41.2405720027482,44.6388909867358,49.6310484743671,30.3380821520156,53.5501313815568,52.2849610309065,48.7364299256802,15.1074086728621,42.0093365206246,10.9525328046311,14.2560342873846,32.1447008062124,25.4845181342647,26.5888712472008,28.6171393721913,34.1573559250462,15.5155904671142,43.458784467203,59.4586323850098,32.4514207238249,65.3369375001721,14.5305604907978,19.8608371601268,33.4852403832108,24.3073787828366,19.8891381430187,20.6112432036503,30.1509307257176,12.1518959213712,29.913160584488,1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26519 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11814 | |||
|TSSclassifier=S | |||
|UniProt=P62072 | |||
|association_with_transcript=0bp_to_ENST00000257245,ENST00000525158,NM_012456,uc001nkm.1_5end | |||
|description=CAGE_peak_1_at_TIMM10_5end | |||
|id=chr11:57298187..57298243,- | |||
|ontology_enrichment_celltype=CL:0000012!1.30e-20!682;CL:0000548!1.43e-20!679;CL:0000004!1.43e-20!679;CL:0000255!1.43e-20!679;CL:0000066!3.36e-14!254;CL:0002321!5.14e-13!248;CL:0000220!1.29e-12!246;CL:0000003!2.38e-11!722;CL:0000144!2.74e-10!625;CL:0000063!2.72e-09!578;CL:0000222!8.42e-08!119 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.23e-14,253;CL:0002321,3.21e-13,250;CL:0000222,5.71e-08,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!7.42e-14!239;DOID:162!1.22e-13!235;DOID:2531!5.29e-08!51;DOID:0060083!5.29e-08!51;DOID:0050686!2.44e-07!137;DOID:0050687!5.06e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,7.42e-14,239;DOID:162,1.22e-13,235;DOID:2531,5.29e-08,51;DOID:0060083,5.29e-08,51;DOID:0050686,2.44e-07,137;DOID:0050687,5.06e-07,143 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,4.61e-07,148;UBERON:0002100,5.86e-07,199 | |||
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| |||
|short_description=p1@TIMM10 | |||
}} |
Revision as of 18:10, 10 September 2013
Short description: | p1@TIMM10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TIMM10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000257245, ENST00000525158, NM_012456, uc001nkm.1_5end |
EntrezGene: | TIMM10 |
HGNC: | 11814 |
UniProt: | P62072 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.23e-14 | 253 |
embryonic cell | 3.21e-13 | 250 |
mesodermal cell | 5.71e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 4.61e-07 | 148 |
trunk | 5.86e-07 | 199 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 7.42e-14 | 239 |
cancer | 1.22e-13 | 235 |
hematologic cancer | 5.29e-08 | 51 |
immune system cancer | 5.29e-08 | 51 |
organ system cancer | 2.44e-07 | 137 |
cell type cancer | 5.06e-07 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.