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FFCP PHASE1:Hg19::chr12:52306161..52306194,+: Difference between revisions

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{{FFCP
{{FFCP|DPIdataset=robustDPI|EntrezGene=94|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=175|TSSclassifier=S|UniProt=E7EN07|association_with_transcript=6bp_to_ENST00000419526,ENST00000548659_5end|coexpression_cluster_id=C3289|description=CAGE_peak_3_at_ACVRL1_5end|id=chr12:52306161..52306194,+|ontology_enrichment_celltype=CL:0000115!2.22e-25!35;CL:0002139!2.44e-21!24;CL:0002078!8.47e-21!44;CL:0000071!1.61e-16!18;CL:0002546!1.61e-16!18;CL:0000213!1.81e-13!57;CL:0000215!1.81e-13!57;CL:1000413!4.89e-09!9;CL:0000222!6.31e-07!119|ontology_enrichment_celltype_v019=CL:0002139;9.61e-43;24!CL:0000115;5.25e-35;36!CL:0000071;1.11e-32;18!CL:0002078;5.30e-21;45!CL:1000413;4.35e-17;9!CL:0000213;3.47e-14;58!CL:0000215;3.47e-14;58!CL:0002543;5.25e-12;6!CL:0002544;7.57e-12;6!CL:0002138;1.51e-11;6!CL:0000235;4.24e-10;6!CL:0002188;1.35e-09;5!CL:0002144;7.72e-07;3|ontology_enrichment_celltype_v019_2=CL:0002139,9.99e-43,24;CL:0000115,3.98e-42,36;CL:0000071,1.18e-32,18;CL:0002546,1.18e-32,18;CL:0002078,1.42e-31,45;CL:0000213,3.37e-22,58;CL:0000215,3.37e-22,58;CL:1000413,4.50e-17,9;CL:0002543,5.32e-12,6;CL:0002544,7.68e-12,6;CL:0005020,1.47e-11,6;CL:0002138,1.47e-11,6;CL:0005022,1.47e-11,6;CL:0000222,9.74e-11,121;CL:0000235,3.78e-10,6;CL:0002188,1.28e-09,5;CL:0002144,7.81e-07,3|ontology_enrichment_development_v019=CL:0002546;1.11e-32;18!CL:0005022;1.51e-11;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.42e-22!115;UBERON:0001986!1.61e-16!18;UBERON:0004638!1.61e-16!18;UBERON:0004852!1.61e-16!18;UBERON:0000477!2.68e-13!286;UBERON:0004111!4.42e-13!241;UBERON:0000487!7.40e-12!22;UBERON:0000025!1.20e-11!194;UBERON:0000055!1.52e-11!69;UBERON:0006914!2.78e-11!25;UBERON:0002049!1.20e-10!79;UBERON:0007798!1.20e-10!79;UBERON:0000468!2.41e-10!659;UBERON:0000467!7.48e-10!625;UBERON:0000480!1.01e-09!626;UBERON:0001009!2.30e-09!113;UBERON:0003915!4.89e-09!9;UBERON:0004700!4.89e-09!9;UBERON:0001917!4.89e-09!9;UBERON:0004872!7.69e-09!84;UBERON:0002465!1.88e-08!10;UBERON:0004535!1.90e-08!110;UBERON:0001981!6.73e-08!60;UBERON:0007500!6.73e-08!60;UBERON:0004537!6.73e-08!60;UBERON:0006965!6.73e-08!60;UBERON:0001049!8.28e-08!57;UBERON:0005068!8.28e-08!57;UBERON:0006241!8.28e-08!57;UBERON:0007135!8.28e-08!57;UBERON:0003081!1.74e-07!216;UBERON:0001473!1.83e-07!8;UBERON:0004536!1.83e-07!8;UBERON:0006558!1.83e-07!8;UBERON:0000922!3.03e-07!612;UBERON:0001017!5.41e-07!82;UBERON:0000955!7.42e-07!69;UBERON:0006238!7.42e-07!69|ontology_enrichment_uberon_v019=UBERON:0004638;1.11e-32;18!UBERON:0001986;1.11e-32;18!UBERON:0004852;1.11e-32;18!UBERON:0000487;1.31e-25;22!UBERON:0006914;8.35e-22;25!UBERON:0003915;4.35e-17;9!UBERON:0004700;4.35e-17;9!UBERON:0001917;4.35e-17;9!UBERON:0000490;5.45e-14;33!UBERON:0000055;1.41e-13;65!UBERON:0001473;3.35e-11;8!UBERON:0004536;3.35e-11;8!UBERON:0006558;3.35e-11;8!UBERON:0002465;5.96e-11;10!UBERON:0007500;6.85e-10;56!UBERON:0001981;6.85e-10;56!UBERON:0004537;6.85e-10;56!UBERON:0001638;7.05e-10;9!UBERON:0003920;7.05e-10;9!UBERON:0004582;7.05e-10;9!UBERON:0002049;2.49e-09;75!UBERON:0007798;2.49e-09;75!UBERON:0003914;1.20e-07;74!UBERON:0001637;5.32e-07;42!UBERON:0003509;5.32e-07;42!UBERON:0004572;5.32e-07;42!UBERON:0010523;7.72e-07;3!UBERON:0001915;7.72e-07;3!UBERON:0001982;7.72e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.18e-32,18;UBERON:0001986,1.18e-32,18;UBERON:0004852,1.18e-32,18;UBERON:0000487,1.37e-25,22;UBERON:0000055,3.17e-24,68;UBERON:0006914,8.68e-22,25;UBERON:0002049,1.12e-19,78;UBERON:0007798,1.12e-19,78;UBERON:0007500,3.40e-17,59;UBERON:0001981,3.40e-17,59;UBERON:0004537,3.40e-17,59;UBERON:0006965,3.40e-17,59;UBERON:0003915,4.50e-17,9;UBERON:0004700,4.50e-17,9;UBERON:0001917,4.50e-17,9;UBERON:0004872,7.18e-15,83;UBERON:0001009,7.16e-14,112;UBERON:0004111,2.21e-13,240;UBERON:0004535,8.12e-13,109;UBERON:0000025,1.69e-12,192;UBERON:0003914,6.81e-12,117;UBERON:0007023,1.01e-11,114;UBERON:0001473,3.56e-11,8;UBERON:0004536,3.56e-11,8;UBERON:0006558,3.56e-11,8;UBERON:0002465,4.28e-11,10;UBERON:0001638,5.63e-10,9;UBERON:0003920,5.63e-10,9;UBERON:0004582,5.63e-10,9;UBERON:0001637,3.88e-07,42;UBERON:0003509,3.88e-07,42;UBERON:0004572,3.88e-07,42;UBERON:0003081,4.04e-07,203;UBERON:0010523,7.81e-07,3;UBERON:0001915,7.81e-07,3;UBERON:0001982,7.81e-07,3;UBERON:0002298,8.79e-07,6|phase1_expression=0.181678379270557,0,0,1.0007329835313,0.446961094427288,0,0,0,0,0,1.39560233594486,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619264493264304,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,1.08505435357926,0.671746422719773,0.971680998056939,0.77272670290256,0.290796477559129,0.377875943688809,0.485168122375632,0.232429036905685,0,0.619412741790207,0,0,0,0,0.645484683583826,1.35426486594342,0.188242339542605,0.545812300115692,0,0.612167784741805,0.641858054152187,0,0.329851300186716,0.398927315243264,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0.434377689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|DPIdataset=robustDPI
|EntrezGene=94
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=175
|TSSclassifier=S
|UniProt=E7EN07
|association_with_transcript=6bp_to_ENST00000419526,ENST00000548659_5end
|coexpression_cluster_id=C3289
|description=CAGE_peak_3_at_ACVRL1_5end
|id=chr12:52306161..52306194,+
|ontology_enrichment_celltype=CL:0000115!2.22e-25!35;CL:0002139!2.44e-21!24;CL:0002078!8.47e-21!44;CL:0000071!1.61e-16!18;CL:0002546!1.61e-16!18;CL:0000213!1.81e-13!57;CL:0000215!1.81e-13!57;CL:1000413!4.89e-09!9;CL:0000222!6.31e-07!119
|ontology_enrichment_celltype_v019=CL:0002139;9.61e-43;24!CL:0000115;5.25e-35;36!CL:0000071;1.11e-32;18!CL:0002078;5.30e-21;45!CL:1000413;4.35e-17;9!CL:0000213;3.47e-14;58!CL:0000215;3.47e-14;58!CL:0002543;5.25e-12;6!CL:0002544;7.57e-12;6!CL:0002138;1.51e-11;6!CL:0000235;4.24e-10;6!CL:0002188;1.35e-09;5!CL:0002144;7.72e-07;3
|ontology_enrichment_celltype_v019_2=CL:0002139,9.99e-43,24;CL:0000115,3.98e-42,36;CL:0000071,1.18e-32,18;CL:0002546,1.18e-32,18;CL:0002078,1.42e-31,45;CL:0000213,3.37e-22,58;CL:0000215,3.37e-22,58;CL:1000413,4.50e-17,9;CL:0002543,5.32e-12,6;CL:0002544,7.68e-12,6;CL:0005020,1.47e-11,6;CL:0002138,1.47e-11,6;CL:0005022,1.47e-11,6;CL:0000222,9.74e-11,121;CL:0000235,3.78e-10,6;CL:0002188,1.28e-09,5;CL:0002144,7.81e-07,3
|ontology_enrichment_development_v019=CL:0002546;1.11e-32;18!CL:0005022;1.51e-11;6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
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|short_description=p3@ACVRL1
}}

Revision as of 23:04, 10 September 2013

Short description:p3@ACVRL1
Species:Human (Homo sapiens)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_ACVRL1_5end
Coexpression cluster:C3289_lung_Endothelial_Renal_Hepatic_Lymphatic_adipose_breast
Association with transcript: 6bp_to_ENST00000419526, ENST00000548659_5end
EntrezGene:ACVRL1
HGNC: 175
UniProt: E7EN07
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data









Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.