FFCP PHASE1:Hg19::chr12:111923627..111923640,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6311|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10555|TSSclassifier=S|UniProt=|association_with_transcript=13bp_to_ENST00000495342_5end|description=CAGE_peak_13_at_ATXN2_5end|id=chr12:111923627..111923640,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002554;1.70e-07;2|ontology_enrichment_celltype_v019_2=CL:0002554,1.36e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000178;5.31e-08;15!UBERON:0000179;5.31e-08;15!UBERON:0000463;5.31e-08;15!UBERON:0002771;1.02e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.51e-08,15;UBERON:0000179,5.51e-08,15;UBERON:0000463,5.51e-08,15;UBERON:0002771,1.12e-07,2|phase1_expression=0.363356758541113,0.428201047781966,0,0,0.893922188854576,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0,0.246242116153576,0.408001382488506,0.313454721478088,0,0,0.251085279189606,0.0764134057479513,0.246301768349837,0.157421562627358,0,0,0,0,0,0,0,0.142169232487422,0,0.553995408531877,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0.209658645508376,0,0,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0.267440195783507,0.144824403882799,2.43806866313962,0,0,0.722878304769133,0,0.434539556882471,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.175669571386252,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0.35576626268671,0,0.402829317109147,0,0,0,0.81014194788176,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0.326923806226917,0.302714855289863,0,0.70296429550139,0.312160076830321,0.570471821544449,0,0,0,0,0.408308342509787,0.122834317311768,0.413303124703062,0,0.247266929278557,0,1.43723628363248,0.168336113954066,0.125118519871964,0,0,0,0,0.226864366320042,0.89694817844431,0,0.423863802319124,0.600182192168805,0.103052529238439,0,0.18611685633159,0.168776332241266,0.194874010322397,0.252433774244115,0,0,0.355009592516614,0.403008392910561,0.169560592310488,0,0.272746120590835,0,0.609868530647977,0.265059536642971,0.348581828608555,0.207322110030741,0,0,0,0,0,0.928735856063958,0,0.236613600079688,0,0.241011029883482,0.330881918197182,0,0,0,0.392442930250692,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0.185176890317059,0.325808305310325,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0.148631162288728,0,0.16798212819886,0.141775097242386,0.358234090811393,0,0,0,0.088048434013226,0.207328115540772,0,0,0.126995788584338,0.381988425558278,0,0,0,0,0,0,0.43596006883328,0.36669142910475,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,2.10833939483032,0,1.14861935834114,0,0.144781306667579,0,0.179060963239896,0,0.197030760201927,0,0,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0,0,0,0.12269149171914,0,0.542530047399471,0,0.535286966391485,0.157702415033935,0.117141414992713,0,0,0,1.32845119707087,0,0.434418072340414,0,0.343143423810856,0,0,0.106727557803444,0,0,0.30239029332968,0,0.153461973288062,0.280660094433074,0,0,1.28683136914886,0,0.154209693802656,0.355123450626254,0,0.519254429183621,0.116210378459959,0.241718899183244,0.601519410909855,0.368323955743585,0.229628896329213,0.182091168006717,0.262248829918848,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0.223874754722178,0.438519753291869,0,0,0,0.325378394664303,0.103041011647722,0.183138929636687,0.082509499920588,0.574265537996172,0.650060246036521,0,0,0,0.15350367472613,0.137836572484531,0,0.145016693914229,0.170453254832202,0,0.165284915360978,0,0,0.2023155617111,0.464845549297286,0.94443704049192,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0,0,0.196498082026242,0.35667105148125,0,0,0,0.379473173765715,0.699869440489966,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,1.52234282769651,0.764637207142375,1.13929437434833,0.476463550915578,0.411362273086194,0.648473311192717,1.08006287447623,0,0.320472213382419,0.962479855263359,0,0.371606350251437,0.144269212976445,0.284567373393656,0,0.399158742865633,0,0,0,0.280797178113459,0.228234679033192,0,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0,0.307240764308458,0,0,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0,0.2841361468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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6311 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10555 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=13bp_to_ENST00000495342_5end | |||
|description=CAGE_peak_13_at_ATXN2_5end | |||
|id=chr12:111923627..111923640,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002554;1.70e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002554,1.36e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.31e-08;15!UBERON:0000179;5.31e-08;15!UBERON:0000463;5.31e-08;15!UBERON:0002771;1.02e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.51e-08,15;UBERON:0000179,5.51e-08,15;UBERON:0000463,5.51e-08,15;UBERON:0002771,1.12e-07,2 | |||
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| |||
|short_description=p13@ATXN2 | |||
}} |
Revision as of 20:54, 10 September 2013
Short description: | p13@ATXN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_ATXN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENST00000495342_5end |
EntrezGene: | ATXN2 |
HGNC: | 10555 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of lymphatic vessel | 1.36e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 5.51e-08 | 15 |
haemolymphatic fluid | 5.51e-08 | 15 |
organism substance | 5.51e-08 | 15 |
middle temporal gyrus | 1.12e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.