FFCP PHASE1:Hg19::chr14:106322016..106322079,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_AY671148,AY671760,AY671772,AY671782,AY671783_5end|coexpression_cluster_id=C350|description=CAGE_peak_1_at_AY671148_5end,CAGE_peak_1_at_AY671760_5end,CAGE_peak_1_at_AY671772_5end,CAGE_peak_1_at_AY671782_5end,CAGE_peak_1_at_AY671783_5end|id=chr14:106322016..106322079,+|ontology_enrichment_celltype=CL:0000945!1.51e-52!24;CL:0000826!1.51e-52!24;CL:0000236!1.83e-29!14;CL:0000542!7.88e-23!53;CL:0000051!7.88e-23!53;CL:0000838!5.40e-21!52;CL:0002087!1.79e-13!119;CL:0000037!6.84e-12!172;CL:0000566!6.84e-12!172;CL:0000988!9.06e-11!182;CL:0000738!2.28e-10!140;CL:0002032!3.20e-09!165;CL:0000837!3.20e-09!165;CL:0000842!3.51e-09!3;CL:0002031!1.27e-08!124;CL:0000224!5.58e-07!4|ontology_enrichment_celltype_v019=CL:0000945;4.07e-77;24!CL:0000236;5.87e-44;13!CL:0000542;2.52e-25;53!CL:0000817;2.44e-07;1|ontology_enrichment_celltype_v019_2=CL:0000945,2.33e-77,24;CL:0000826,2.33e-77,24;CL:0000236,8.89e-41,14;CL:0000542,4.63e-37,53;CL:0000051,4.63e-37,53;CL:0000838,1.17e-33,52;CL:0002087,1.75e-16,115;CL:0000738,2.62e-13,136;CL:0002031,2.76e-12,120;CL:0000037,5.38e-10,168;CL:0002032,2.04e-09,161;CL:0000837,2.04e-09,161;CL:0000988,2.79e-09,177|ontology_enrichment_development_v019=CL:0000051;2.52e-25;53!UBERON:0004872;4.18e-08;7!UBERON:0010115;5.03e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:12603;9.90e-08;1!DOID:4960;5.03e-07;1!DOID:0070004;5.03e-07;1|ontology_enrichment_disease_v019_2=DOID:12603,9.91e-08,1;DOID:4960,3.62e-07,1;DOID:0070004,3.62e-07,1|ontology_enrichment_uberon=UBERON:0000178!1.88e-14!15;UBERON:0000179!1.88e-14!15;UBERON:0000463!1.88e-14!15;UBERON:0007023!3.92e-13!115|ontology_enrichment_uberon_v019=UBERON:0000178;2.08e-13;15!UBERON:0000179;2.08e-13;15!UBERON:0000463;2.08e-13;15!UBERON:0002390;1.03e-12;32!UBERON:0002193;1.10e-10;42!UBERON:0002106;6.59e-09;3!UBERON:0000029;1.12e-07;1!UBERON:0002363;5.03e-07;1!UBERON:0002372;5.03e-07;1!UBERON:0001961;5.03e-07;1!UBERON:0001744;5.03e-07;1!UBERON:0001042;5.03e-07;1!UBERON:0001735;5.03e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.49e-13,15;UBERON:0000179,2.49e-13,15;UBERON:0000463,2.49e-13,15;UBERON:0002106,5.19e-09,3;UBERON:0004854,5.19e-09,3;UBERON:0009034,5.19e-09,3;UBERON:0002095,5.19e-09,3;UBERON:0004782,5.19e-09,3;UBERON:0003281,5.19e-09,3;UBERON:0009664,5.19e-09,3;UBERON:0002296,5.19e-09,3;UBERON:0005602,5.19e-09,3;UBERON:0001179,5.19e-09,3;UBERON:0006293,5.19e-09,3;UBERON:0000029,1.12e-07,1;UBERON:0002363,4.60e-07,1;UBERON:0007645,4.60e-07,1;UBERON:0007647,4.60e-07,1;UBERON:0010115,4.60e-07,1;UBERON:0002372,7.40e-07,1;UBERON:0001961,7.40e-07,1;UBERON:0001744,7.40e-07,1;UBERON:0001735,7.40e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.12632391038937,2.95562122019805,3.93553906568396,0,0,0,0,0,0,9.3735312702165,10.0940155066069,0.293600439334847,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,5.46138611262132,1.77901850772711,2.13365111283254,1.60158394814405,4.59801951963587,5.2883589822789,0.954053754535364,5.12291672198504,1.17447437874188,6.49864487812889,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.647142602455851,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0,3.33524485640905,3.70226045777575,1.29694662238543,0,1.58625035258854,0,0,0,29.3569016698636,3.31819189845823,0,0,0.399158742865633,0,0.846694330895531,0,0,0.456469358066384,0,0,0.50787533340481,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,23.3861130376032,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39010475182674,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0.387956065953678,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846733320657845,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0,0,13.3964825889227,0,7.42934850123465,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AY671148,AY671760,AY671772,AY671782,AY671783_5end | |||
|coexpression_cluster_id=C350 | |||
|description=CAGE_peak_1_at_AY671148_5end,CAGE_peak_1_at_AY671760_5end,CAGE_peak_1_at_AY671772_5end,CAGE_peak_1_at_AY671782_5end,CAGE_peak_1_at_AY671783_5end | |||
|id=chr14:106322016..106322079,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.51e-52!24;CL:0000826!1.51e-52!24;CL:0000236!1.83e-29!14;CL:0000542!7.88e-23!53;CL:0000051!7.88e-23!53;CL:0000838!5.40e-21!52;CL:0002087!1.79e-13!119;CL:0000037!6.84e-12!172;CL:0000566!6.84e-12!172;CL:0000988!9.06e-11!182;CL:0000738!2.28e-10!140;CL:0002032!3.20e-09!165;CL:0000837!3.20e-09!165;CL:0000842!3.51e-09!3;CL:0002031!1.27e-08!124;CL:0000224!5.58e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.07e-77;24!CL:0000236;5.87e-44;13!CL:0000542;2.52e-25;53!CL:0000817;2.44e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.33e-77,24;CL:0000826,2.33e-77,24;CL:0000236,8.89e-41,14;CL:0000542,4.63e-37,53;CL:0000051,4.63e-37,53;CL:0000838,1.17e-33,52;CL:0002087,1.75e-16,115;CL:0000738,2.62e-13,136;CL:0002031,2.76e-12,120;CL:0000037,5.38e-10,168;CL:0002032,2.04e-09,161;CL:0000837,2.04e-09,161;CL:0000988,2.79e-09,177 | |||
|ontology_enrichment_development_v019=CL:0000051;2.52e-25;53!UBERON:0004872;4.18e-08;7!UBERON:0010115;5.03e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;9.90e-08;1!DOID:4960;5.03e-07;1!DOID:0070004;5.03e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,9.91e-08,1;DOID:4960,3.62e-07,1;DOID:0070004,3.62e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.88e-14!15;UBERON:0000179!1.88e-14!15;UBERON:0000463!1.88e-14!15;UBERON:0007023!3.92e-13!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.08e-13;15!UBERON:0000179;2.08e-13;15!UBERON:0000463;2.08e-13;15!UBERON:0002390;1.03e-12;32!UBERON:0002193;1.10e-10;42!UBERON:0002106;6.59e-09;3!UBERON:0000029;1.12e-07;1!UBERON:0002363;5.03e-07;1!UBERON:0002372;5.03e-07;1!UBERON:0001961;5.03e-07;1!UBERON:0001744;5.03e-07;1!UBERON:0001042;5.03e-07;1!UBERON:0001735;5.03e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.49e-13,15;UBERON:0000179,2.49e-13,15;UBERON:0000463,2.49e-13,15;UBERON:0002106,5.19e-09,3;UBERON:0004854,5.19e-09,3;UBERON:0009034,5.19e-09,3;UBERON:0002095,5.19e-09,3;UBERON:0004782,5.19e-09,3;UBERON:0003281,5.19e-09,3;UBERON:0009664,5.19e-09,3;UBERON:0002296,5.19e-09,3;UBERON:0005602,5.19e-09,3;UBERON:0001179,5.19e-09,3;UBERON:0006293,5.19e-09,3;UBERON:0000029,1.12e-07,1;UBERON:0002363,4.60e-07,1;UBERON:0007645,4.60e-07,1;UBERON:0007647,4.60e-07,1;UBERON:0010115,4.60e-07,1;UBERON:0002372,7.40e-07,1;UBERON:0001961,7.40e-07,1;UBERON:0001744,7.40e-07,1;UBERON:0001735,7.40e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.12632391038937,2.95562122019805,3.93553906568396,0,0,0,0,0,0,9.3735312702165,10.0940155066069,0.293600439334847,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,5.46138611262132,1.77901850772711,2.13365111283254,1.60158394814405,4.59801951963587,5.2883589822789,0.954053754535364,5.12291672198504,1.17447437874188,6.49864487812889,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.647142602455851,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0,3.33524485640905,3.70226045777575,1.29694662238543,0,1.58625035258854,0,0,0,29.3569016698636,3.31819189845823,0,0,0.399158742865633,0,0.846694330895531,0,0,0.456469358066384,0,0,0.50787533340481,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,23.3861130376032,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39010475182674,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0.387956065953678,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846733320657845,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0,0,13.3964825889227,0,7.42934850123465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89436477626897,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34064966502131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0,1.07214816264985,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00652811080656,0,0,0,0,0,0,0,0,7.33074560242858,1.93373663920732,0,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0.213233981900981,0,0.193766729508018,0,0,0,0,0,0,1.01028079521881,0.358611026963382,0,0,0,0,0,0,0,0,0,1.20764276154616,0 | |||
|short_description=p1@AY671148,p1@AY671760,p1@AY671772,p1@AY671782,p1@AY671783 | |||
}} |
Revision as of 03:35, 11 September 2013
Short description: | p1@AY671148, p1@AY671760, p1@AY671772, p1@AY671782, p1@AY671783 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AY671148_5end, CAGE_peak_1_at_AY671760_5end, CAGE_peak_1_at_AY671772_5end, CAGE_peak_1_at_AY671782_5end, CAGE_peak_1_at_AY671783_5end |
Coexpression cluster: | C350_b_lymph_acute_CD19_lymphoma_spleen_B |
Association with transcript: | 0bp_to_AY671148, AY671760, AY671772, AY671782, AY671783_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.33e-77 | 24 |
pro-B cell | 2.33e-77 | 24 |
B cell | 8.89e-41 | 14 |
lymphocyte | 4.63e-37 | 53 |
common lymphoid progenitor | 4.63e-37 | 53 |
lymphoid lineage restricted progenitor cell | 1.17e-33 | 52 |
nongranular leukocyte | 1.75e-16 | 115 |
leukocyte | 2.62e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 2.76e-12 | 120 |
hematopoietic stem cell | 5.38e-10 | 168 |
hematopoietic oligopotent progenitor cell | 2.04e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.04e-09 | 161 |
hematopoietic cell | 2.79e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 2.49e-13 | 15 |
haemolymphatic fluid | 2.49e-13 | 15 |
organism substance | 2.49e-13 | 15 |
spleen | 5.19e-09 | 3 |
gastrointestinal system mesentery | 5.19e-09 | 3 |
stomach region | 5.19e-09 | 3 |
mesentery | 5.19e-09 | 3 |
gastrointestinal system serosa | 5.19e-09 | 3 |
mesentery of stomach | 5.19e-09 | 3 |
gut mesentery | 5.19e-09 | 3 |
dorsal mesentery | 5.19e-09 | 3 |
dorsal mesogastrium | 5.19e-09 | 3 |
peritoneal cavity | 5.19e-09 | 3 |
spleen primordium | 5.19e-09 | 3 |
lymph node | 1.12e-07 | 1 |
dura mater | 4.60e-07 | 1 |
future meninx | 4.60e-07 | 1 |
ectomeninx | 4.60e-07 | 1 |
future dura mater | 4.60e-07 | 1 |
tonsil | 7.40e-07 | 1 |
mucosa-associated lymphoid tissue | 7.40e-07 | 1 |
lymphoid tissue | 7.40e-07 | 1 |
tonsillar ring | 7.40e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 9.91e-08 | 1 |
bone marrow cancer | 3.62e-07 | 1 |
myeloma | 3.62e-07 | 1 |
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