FFCP PHASE1:Hg19::chr15:39888616..39888632,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C142|description=CAGE_peak_at_chr15:39888616..39888632,+|id=chr15:39888616..39888632,+|ontology_enrichment_celltype=CL:0002371!7.72e-16!591;CL:0000144!2.75e-14!625;CL:0000548!1.56e-13!679;CL:0000004!1.56e-13!679;CL:0000255!1.56e-13!679;CL:0000012!1.56e-13!682;CL:0000055!3.11e-13!180;CL:0000057!5.01e-13!75;CL:0000222!2.49e-11!119;CL:0002139!2.78e-09!24;CL:0000003!3.40e-08!722;CL:0000192!6.53e-08!42;CL:0000514!6.53e-08!42;CL:0000115!7.74e-08!35;CL:0000220!9.50e-08!246;CL:0002078!1.08e-07!44;CL:0000359!1.42e-07!32;CL:0000063!1.61e-07!578;CL:0002321!1.88e-07!248;CL:0000680!6.52e-07!57;CL:0000056!6.52e-07!57;CL:0000355!6.52e-07!57|ontology_enrichment_celltype_v019=CL:0002620;8.90e-09;23!CL:0002334;1.08e-08;12!CL:0002139;5.82e-08;24!CL:0000115;6.23e-07;36|ontology_enrichment_celltype_v019_2=CL:0000057,1.39e-15,76;CL:0002620,6.59e-09,23;CL:0002334,1.02e-08,12;CL:0002139,6.75e-08,24;CL:0000048,1.45e-07,427;CL:0000723,3.53e-07,433;CL:0000115,4.09e-07,36|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;3.37e-08;5!DOID:450;3.37e-08;5!DOID:66;3.37e-08;5!DOID:423;3.37e-08;5!DOID:0080000;3.37e-08;5!DOID:11722;3.37e-08;5|ontology_enrichment_disease_v019_2=DOID:17,2.85e-08,5;DOID:450,2.85e-08,5;DOID:66,2.85e-08,5;DOID:423,2.85e-08,5;DOID:0080000,2.85e-08,5;DOID:11722,2.85e-08,5|ontology_enrichment_uberon=UBERON:0002049!1.41e-16!79;UBERON:0007798!1.41e-16!79;UBERON:0000055!1.79e-15!69;UBERON:0004872!1.75e-14!84;UBERON:0001981!4.15e-13!60;UBERON:0007500!4.15e-13!60;UBERON:0004537!4.15e-13!60;UBERON:0006965!4.15e-13!60;UBERON:0004535!9.36e-13!110;UBERON:0001009!3.18e-12!113;UBERON:0001637!1.52e-10!42;UBERON:0003509!1.52e-10!42;UBERON:0004572!1.52e-10!42;UBERON:0000467!5.90e-10!625;UBERON:0000468!7.25e-10!659;UBERON:0000480!8.07e-10!626;UBERON:0003914!8.90e-10!118;UBERON:0003102!3.26e-08!95;UBERON:0000914!8.28e-08!83;UBERON:0002329!8.28e-08!83;UBERON:0003077!8.28e-08!83;UBERON:0003059!8.28e-08!83;UBERON:0007282!8.28e-08!83;UBERON:0009618!8.28e-08!83;UBERON:0007285!8.28e-08!83;UBERON:0004573!1.06e-07!33;UBERON:0004571!1.06e-07!33;UBERON:0000926!1.37e-07!448;UBERON:0004120!1.37e-07!448;UBERON:0006603!1.37e-07!448;UBERON:0000490!1.56e-07!138;UBERON:0004923!1.59e-07!57;UBERON:0000486!3.58e-07!82;UBERON:0005631!9.45e-07!14;UBERON:0000158!9.45e-07!14|ontology_enrichment_uberon_v019=UBERON:0003688;5.30e-11;6!UBERON:0002358;5.30e-11;6!UBERON:0003684;5.30e-11;6!UBERON:0001178;5.30e-11;6!UBERON:0005631;3.11e-09;10!UBERON:0000158;3.11e-09;10!UBERON:0000305;3.86e-08;7!UBERON:0001637;3.99e-08;42!UBERON:0003509;3.99e-08;42!UBERON:0004572;3.99e-08;42!UBERON:0000055;3.80e-07;65!UBERON:0007500;4.66e-07;56!UBERON:0001981;4.66e-07;56!UBERON:0004537;4.66e-07;56!UBERON:0000947;4.94e-07;21!UBERON:0010191;4.94e-07;21!UBERON:0004457;5.80e-07;9!UBERON:0000042;5.80e-07;9!UBERON:0004573;9.34e-07;33!UBERON:0004571;9.34e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0000055,6.93e-12,68;UBERON:0003688,4.66e-11,6;UBERON:0002358,4.66e-11,6;UBERON:0003684,4.66e-11,6;UBERON:0001178,4.66e-11,6;UBERON:0001637,1.74e-10,42;UBERON:0003509,1.74e-10,42;UBERON:0004572,1.74e-10,42;UBERON:0007500,2.34e-09,59;UBERON:0001981,2.34e-09,59;UBERON:0004537,2.34e-09,59;UBERON:0006965,2.34e-09,59;UBERON:0002049,2.38e-09,78;UBERON:0007798,2.38e-09,78;UBERON:0004871,3.27e-09,8;UBERON:0000305,4.03e-08,7;UBERON:0004872,4.10e-08,83;UBERON:0002199,9.61e-08,46;UBERON:0002416,9.61e-08,46;UBERON:0005631,1.80e-07,14;UBERON:0000158,1.80e-07,14;UBERON:0000947,3.21e-07,21;UBERON:0010191,3.21e-07,21;UBERON:0002097,3.38e-07,41;UBERON:0004573,3.53e-07,33;UBERON:0004571,3.53e-07,33;UBERON:0004923,5.47e-07,66|phase1_expression=5.26867299884614,5.1384125733836,2.96004248601539,15.0109947529696,4.46961094427288,16.574431957907,2.53299878168311,0.631719873426831,0,0.491467873003018,0,2.18441372130172,1.05506791291381,0.123766352960047,0.331397375727916,2.6893005858071,4.82155622419182,1.46062018077475,4.87932798790507,0.123121058076788,0.204000691244253,0,0.286235987131057,0,0,0,0,0,0.393364276848904,0,0.619264493264304,0,0.30120591877825,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0.436194716338694,0,0,1.62700325833979,0,0,1.7261543539329,0.256160706529101,0.236482229888585,2.06847408441971,0,0,0.564727018627814,0,0.449446968890169,1.22433556948361,0.320929027076094,0.639337125799041,0.989553900560148,0,0.426224750532694,4.06292934080018,0.56738522469114,0,1.7587406567972,1.0429658368404,0.217188844705117,4.23779651843358,0,0.316462387440884,0,0,0,0,0.901061357049038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53435074212236,0.722878304769133,1.00267582127178,1.44846518960824,0,1.94653948121054,0.0945348171640679,0.221729397462564,0.1756695713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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_at_chr15:39888616..39888632,+ | |||
|id=chr15:39888616..39888632,+ | |||
|ontology_enrichment_celltype=CL:0002371!7.72e-16!591;CL:0000144!2.75e-14!625;CL:0000548!1.56e-13!679;CL:0000004!1.56e-13!679;CL:0000255!1.56e-13!679;CL:0000012!1.56e-13!682;CL:0000055!3.11e-13!180;CL:0000057!5.01e-13!75;CL:0000222!2.49e-11!119;CL:0002139!2.78e-09!24;CL:0000003!3.40e-08!722;CL:0000192!6.53e-08!42;CL:0000514!6.53e-08!42;CL:0000115!7.74e-08!35;CL:0000220!9.50e-08!246;CL:0002078!1.08e-07!44;CL:0000359!1.42e-07!32;CL:0000063!1.61e-07!578;CL:0002321!1.88e-07!248;CL:0000680!6.52e-07!57;CL:0000056!6.52e-07!57;CL:0000355!6.52e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002620;8.90e-09;23!CL:0002334;1.08e-08;12!CL:0002139;5.82e-08;24!CL:0000115;6.23e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.39e-15,76;CL:0002620,6.59e-09,23;CL:0002334,1.02e-08,12;CL:0002139,6.75e-08,24;CL:0000048,1.45e-07,427;CL:0000723,3.53e-07,433;CL:0000115,4.09e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;3.37e-08;5!DOID:450;3.37e-08;5!DOID:66;3.37e-08;5!DOID:423;3.37e-08;5!DOID:0080000;3.37e-08;5!DOID:11722;3.37e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.85e-08,5;DOID:450,2.85e-08,5;DOID:66,2.85e-08,5;DOID:423,2.85e-08,5;DOID:0080000,2.85e-08,5;DOID:11722,2.85e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.41e-16!79;UBERON:0007798!1.41e-16!79;UBERON:0000055!1.79e-15!69;UBERON:0004872!1.75e-14!84;UBERON:0001981!4.15e-13!60;UBERON:0007500!4.15e-13!60;UBERON:0004537!4.15e-13!60;UBERON:0006965!4.15e-13!60;UBERON:0004535!9.36e-13!110;UBERON:0001009!3.18e-12!113;UBERON:0001637!1.52e-10!42;UBERON:0003509!1.52e-10!42;UBERON:0004572!1.52e-10!42;UBERON:0000467!5.90e-10!625;UBERON:0000468!7.25e-10!659;UBERON:0000480!8.07e-10!626;UBERON:0003914!8.90e-10!118;UBERON:0003102!3.26e-08!95;UBERON:0000914!8.28e-08!83;UBERON:0002329!8.28e-08!83;UBERON:0003077!8.28e-08!83;UBERON:0003059!8.28e-08!83;UBERON:0007282!8.28e-08!83;UBERON:0009618!8.28e-08!83;UBERON:0007285!8.28e-08!83;UBERON:0004573!1.06e-07!33;UBERON:0004571!1.06e-07!33;UBERON:0000926!1.37e-07!448;UBERON:0004120!1.37e-07!448;UBERON:0006603!1.37e-07!448;UBERON:0000490!1.56e-07!138;UBERON:0004923!1.59e-07!57;UBERON:0000486!3.58e-07!82;UBERON:0005631!9.45e-07!14;UBERON:0000158!9.45e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;5.30e-11;6!UBERON:0002358;5.30e-11;6!UBERON:0003684;5.30e-11;6!UBERON:0001178;5.30e-11;6!UBERON:0005631;3.11e-09;10!UBERON:0000158;3.11e-09;10!UBERON:0000305;3.86e-08;7!UBERON:0001637;3.99e-08;42!UBERON:0003509;3.99e-08;42!UBERON:0004572;3.99e-08;42!UBERON:0000055;3.80e-07;65!UBERON:0007500;4.66e-07;56!UBERON:0001981;4.66e-07;56!UBERON:0004537;4.66e-07;56!UBERON:0000947;4.94e-07;21!UBERON:0010191;4.94e-07;21!UBERON:0004457;5.80e-07;9!UBERON:0000042;5.80e-07;9!UBERON:0004573;9.34e-07;33!UBERON:0004571;9.34e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,6.93e-12,68;UBERON:0003688,4.66e-11,6;UBERON:0002358,4.66e-11,6;UBERON:0003684,4.66e-11,6;UBERON:0001178,4.66e-11,6;UBERON:0001637,1.74e-10,42;UBERON:0003509,1.74e-10,42;UBERON:0004572,1.74e-10,42;UBERON:0007500,2.34e-09,59;UBERON:0001981,2.34e-09,59;UBERON:0004537,2.34e-09,59;UBERON:0006965,2.34e-09,59;UBERON:0002049,2.38e-09,78;UBERON:0007798,2.38e-09,78;UBERON:0004871,3.27e-09,8;UBERON:0000305,4.03e-08,7;UBERON:0004872,4.10e-08,83;UBERON:0002199,9.61e-08,46;UBERON:0002416,9.61e-08,46;UBERON:0005631,1.80e-07,14;UBERON:0000158,1.80e-07,14;UBERON:0000947,3.21e-07,21;UBERON:0010191,3.21e-07,21;UBERON:0002097,3.38e-07,41;UBERON:0004573,3.53e-07,33;UBERON:0004571,3.53e-07,33;UBERON:0004923,5.47e-07,66 | |||
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| |||
|short_description=p@chr15:39888616..39888632,+ | |||
}} |
Revision as of 06:52, 11 September 2013
Short description: | p@chr15:39888616..39888632, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:39888616..39888632, + |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.39e-15 | 76 |
skin fibroblast | 6.59e-09 | 23 |
preadipocyte | 1.02e-08 | 12 |
endothelial cell of vascular tree | 6.75e-08 | 24 |
multi fate stem cell | 1.45e-07 | 427 |
somatic stem cell | 3.53e-07 | 433 |
endothelial cell | 4.09e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
vessel | 6.93e-12 | 68 |
omentum | 4.66e-11 | 6 |
peritoneum | 4.66e-11 | 6 |
abdominal cavity | 4.66e-11 | 6 |
visceral peritoneum | 4.66e-11 | 6 |
artery | 1.74e-10 | 42 |
arterial blood vessel | 1.74e-10 | 42 |
arterial system | 1.74e-10 | 42 |
epithelial tube open at both ends | 2.34e-09 | 59 |
blood vessel | 2.34e-09 | 59 |
blood vasculature | 2.34e-09 | 59 |
vascular cord | 2.34e-09 | 59 |
vasculature | 2.38e-09 | 78 |
vascular system | 2.38e-09 | 78 |
somatic layer of lateral plate mesoderm | 3.27e-09 | 8 |
amnion | 4.03e-08 | 7 |
splanchnic layer of lateral plate mesoderm | 4.10e-08 | 83 |
integument | 9.61e-08 | 46 |
integumental system | 9.61e-08 | 46 |
extraembryonic membrane | 1.80e-07 | 14 |
membranous layer | 1.80e-07 | 14 |
aorta | 3.21e-07 | 21 |
aortic system | 3.21e-07 | 21 |
skin of body | 3.38e-07 | 41 |
systemic artery | 3.53e-07 | 33 |
systemic arterial system | 3.53e-07 | 33 |
organ component layer | 5.47e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.85e-08 | 5 |
myotonic disease | 2.85e-08 | 5 |
muscle tissue disease | 2.85e-08 | 5 |
myopathy | 2.85e-08 | 5 |
muscular disease | 2.85e-08 | 5 |
myotonic dystrophy | 2.85e-08 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.