FFCP PHASE1:Hg19::chr16:11076765..11076778,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C74|description=CAGE_peak_at_chr16:11076765..11076778,+|id=chr16:11076765..11076778,+|ontology_enrichment_celltype=CL:0000945!2.61e-14!24;CL:0000826!2.61e-14!24;CL:0000838!2.99e-11!52;CL:0000542!5.61e-11!53;CL:0000051!5.61e-11!53;CL:0000080!3.62e-10!6|ontology_enrichment_celltype_v019=CL:0000775;3.27e-23;3!CL:0000094;1.35e-09;8!CL:0000081;2.47e-07;11|ontology_enrichment_celltype_v019_2=CL:0000775,3.27e-23,3;CL:0000094,1.35e-09,8;CL:0000081,2.47e-07,11|ontology_enrichment_development_v019=UBERON:0004872;8.16e-11;7|ontology_enrichment_disease=DOID:0060058!3.19e-18!10|ontology_enrichment_disease_v019=DOID:0060058;5.73e-08;10|ontology_enrichment_disease_v019_2=DOID:0060058,5.73e-08,10|ontology_enrichment_uberon=UBERON:0002771!4.10e-11!3;UBERON:0000200!1.89e-09!6|ontology_enrichment_uberon_v019=UBERON:0002106;2.62e-23;3!UBERON:0004177;1.40e-14;5!UBERON:0005057;1.40e-14;5!UBERON:0002021;1.83e-14;5|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.62e-23,3;UBERON:0004854,2.62e-23,3;UBERON:0009034,2.62e-23,3;UBERON:0002095,2.62e-23,3;UBERON:0004782,2.62e-23,3;UBERON:0003281,2.62e-23,3;UBERON:0009664,2.62e-23,3;UBERON:0002296,2.62e-23,3;UBERON:0005602,2.62e-23,3;UBERON:0001179,2.62e-23,3;UBERON:0006293,2.62e-23,3;UBERON:0002021,1.83e-14,5;UBERON:0004177,8.16e-11,7;UBERON:0005057,8.16e-11,7;UBERON:0000945,1.24e-09,8;UBERON:0010039,1.24e-09,8;UBERON:0004457,7.48e-07,12;UBERON:0000042,7.48e-07,12;UBERON:0003887,7.48e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.382067028739756,0.246301768349837,0.314843125254717,0,0,0.154816123316076,0,0,0,0.154934401160603,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0.494411622680279,0,0,0.276283915531148,0,0,0.615424027305347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.247127877893006,0.104421949505455,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0.974340787047167,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.99705779624645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0.320568492303233|short_description=p@chr16:11076765..11076778,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_at_chr16:11076765..11076778,+ | |||
|id=chr16:11076765..11076778,+ | |||
|ontology_enrichment_celltype=CL:0000945!2.61e-14!24;CL:0000826!2.61e-14!24;CL:0000838!2.99e-11!52;CL:0000542!5.61e-11!53;CL:0000051!5.61e-11!53;CL:0000080!3.62e-10!6 | |||
|ontology_enrichment_celltype_v019=CL:0000775;3.27e-23;3!CL:0000094;1.35e-09;8!CL:0000081;2.47e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,3.27e-23,3;CL:0000094,1.35e-09,8;CL:0000081,2.47e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0004872;8.16e-11;7 | |||
|ontology_enrichment_disease=DOID:0060058!3.19e-18!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;5.73e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.73e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002771!4.10e-11!3;UBERON:0000200!1.89e-09!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.62e-23;3!UBERON:0004177;1.40e-14;5!UBERON:0005057;1.40e-14;5!UBERON:0002021;1.83e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.62e-23,3;UBERON:0004854,2.62e-23,3;UBERON:0009034,2.62e-23,3;UBERON:0002095,2.62e-23,3;UBERON:0004782,2.62e-23,3;UBERON:0003281,2.62e-23,3;UBERON:0009664,2.62e-23,3;UBERON:0002296,2.62e-23,3;UBERON:0005602,2.62e-23,3;UBERON:0001179,2.62e-23,3;UBERON:0006293,2.62e-23,3;UBERON:0002021,1.83e-14,5;UBERON:0004177,8.16e-11,7;UBERON:0005057,8.16e-11,7;UBERON:0000945,1.24e-09,8;UBERON:0010039,1.24e-09,8;UBERON:0004457,7.48e-07,12;UBERON:0000042,7.48e-07,12;UBERON:0003887,7.48e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.382067028739756,0.246301768349837,0.314843125254717,0,0,0.154816123316076,0,0,0,0.154934401160603,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0.494411622680279,0,0,0.276283915531148,0,0,0.615424027305347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.247127877893006,0.104421949505455,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0.974340787047167,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.99705779624645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr16:11076765..11076778,+ | |||
}} |
Revision as of 09:11, 11 September 2013
Short description: | p@chr16:11076765..11076778, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:11076765..11076778, + |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 3.27e-23 | 3 |
granulocyte | 1.35e-09 | 8 |
blood cell | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.62e-23 | 3 |
gastrointestinal system mesentery | 2.62e-23 | 3 |
stomach region | 2.62e-23 | 3 |
mesentery | 2.62e-23 | 3 |
gastrointestinal system serosa | 2.62e-23 | 3 |
mesentery of stomach | 2.62e-23 | 3 |
gut mesentery | 2.62e-23 | 3 |
dorsal mesentery | 2.62e-23 | 3 |
dorsal mesogastrium | 2.62e-23 | 3 |
peritoneal cavity | 2.62e-23 | 3 |
spleen primordium | 2.62e-23 | 3 |
occipital lobe | 1.83e-14 | 5 |
hemopoietic organ | 8.16e-11 | 7 |
immune organ | 8.16e-11 | 7 |
stomach | 1.24e-09 | 8 |
food storage organ | 1.24e-09 | 8 |
cavity lining | 7.48e-07 | 12 |
serous membrane | 7.48e-07 | 12 |
intraembryonic coelom | 7.48e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.73e-08 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.