FFCP PHASE1:Hg19::chr16:23313645..23313671,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6338|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10600|TSSclassifier=S|UniProt=P51168,B2R812|association_with_transcript=54bp_to_ENST00000343070,NM_000336,uc002dln.2_5end|coexpression_cluster_id=C94|description=CAGE_peak_1_at_SCNN1B_5end|id=chr16:23313645..23313671,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002623;1.69e-07;3!CL:0000622;4.50e-07;5|ontology_enrichment_celltype_v019_2=CL:0002623,1.49e-07,3;CL:0000622,3.37e-07,5|ontology_enrichment_development_v019=UBERON:0006595;1.73e-07;86!UBERON:0004872;3.86e-07;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.54e-18!115;UBERON:0000464!1.75e-09!104;UBERON:0001004!1.40e-08!72;UBERON:0001044!1.76e-08!6;UBERON:0003293!1.76e-08!6;UBERON:0003294!1.76e-08!6;UBERON:0010047!1.76e-08!6;UBERON:0000167!1.76e-08!6;UBERON:0002465!6.09e-08!10;UBERON:0003408!2.00e-07!10;UBERON:0004119!2.32e-07!169;UBERON:0000925!2.32e-07!169;UBERON:0006595!2.32e-07!169;UBERON:0000065!4.60e-07!53;UBERON:0004921!5.51e-07!129;UBERON:0004185!5.51e-07!129|ontology_enrichment_uberon_v019=UBERON:0001044;2.11e-13;6!UBERON:0003293;2.11e-13;6!UBERON:0003294;2.11e-13;6!UBERON:0010047;2.11e-13;6!UBERON:0003408;2.11e-13;6!UBERON:0000167;2.11e-13;6!UBERON:0004921;8.29e-10;33!UBERON:0001041;2.45e-09;14|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.09e-20,114;UBERON:0001044,1.84e-13,6;UBERON:0003293,1.84e-13,6;UBERON:0003294,1.84e-13,6;UBERON:0010047,1.84e-13,6;UBERON:0000167,1.84e-13,6;UBERON:0004119,6.79e-12,160;UBERON:0000925,6.79e-12,160;UBERON:0006595,6.79e-12,160;UBERON:0004921,9.91e-12,118;UBERON:0001007,7.39e-11,145;UBERON:0001555,7.39e-11,145;UBERON:0007026,7.39e-11,145;UBERON:0003408,5.47e-10,10;UBERON:0000161,1.94e-08,36;UBERON:0001004,7.72e-08,74;UBERON:0001041,1.44e-07,87|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,5.58240934377942,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0.572471974262113,0.136874425072884,1.12988375635323,0.840547463227464,0.738905305049512,0.787107813136792,0,0,0,0,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63239701580021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,10.4128365020682,2.18577172975525,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0.71153252537342,3.01248551488203,6.44526907374635,0.760272105718513,26.1146401576541,0,0,0,0,0.225222960966644,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658501712451753,0,0,0,0,0,0,0,0,2.02113026865503,0.925971025153221,4.94660795809955,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0.621984346622316,0.288239906833923,0.6312121671319,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4861867012692,0,0,0,0,0.462092022626489,0,0,0.105551628892876,0,0.170093705276516,0.431831832204279,15.4227252690289,0,0,0.509752546090077,4.15538004464362,0,0,0,0,0,0,11.3345112812494,0,0.082509499920588,0.574265537996172,1.95018073810956,0,0,0,0,0,0,0,0,0,0.661139661443912,1.72971060628596,0.255225424989168,2.12431339796655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,1.34060455107157,1.08890984861323,12.9918445071955,0.43050537267123,0,2.66058092122005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,36.3340284594297,0,39.0051844971174,0,0.71623345421307,0,0.921482106297696,0,0,0,0,0,5.57894367102995,4.69682656402951,0,0,0,0,0,0,0,5.32674390439441,0,0,0,0,0,20.052937603563,0,17.399989810435,0,0,0.236387681767936,0,0.874813840149763,0,0,0,1.52581736317083,0.774054819518572,0.886642856860642,0,0,3.06732237412927,19.3914651429569,0,0,0,0.108647371922008,0,0,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,29.8578579323551,5.04208117669033,9.16545217400438,0,0.123563938946503,0,0,0,0,0,0.978323094660449,0,1.18375320854817,0,0,0.884612114798832,0,0,0,0,0,0,0,0,0.694238953340524,0.293977192243133,0,3.14508002835654,0,0,0,0,41.7052770900203,0,2.03382666702479,0,0,0.0633107959558787,1.75996244461323,0,4.26905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916641696046735,0,0.599037001496973,0,0.446342914883745,0.403100834920358,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,1.5476039091159,0,0,12.8453302897693,23.6045646607491,0,0,0,0,1.32418394073086,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6338 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10600 | |||
|TSSclassifier=S | |||
|UniProt=P51168,B2R812 | |||
|association_with_transcript=54bp_to_ENST00000343070,NM_000336,uc002dln.2_5end | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_1_at_SCNN1B_5end | |||
|id=chr16:23313645..23313671,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002623;1.69e-07;3!CL:0000622;4.50e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.49e-07,3;CL:0000622,3.37e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006595;1.73e-07;86!UBERON:0004872;3.86e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.54e-18!115;UBERON:0000464!1.75e-09!104;UBERON:0001004!1.40e-08!72;UBERON:0001044!1.76e-08!6;UBERON:0003293!1.76e-08!6;UBERON:0003294!1.76e-08!6;UBERON:0010047!1.76e-08!6;UBERON:0000167!1.76e-08!6;UBERON:0002465!6.09e-08!10;UBERON:0003408!2.00e-07!10;UBERON:0004119!2.32e-07!169;UBERON:0000925!2.32e-07!169;UBERON:0006595!2.32e-07!169;UBERON:0000065!4.60e-07!53;UBERON:0004921!5.51e-07!129;UBERON:0004185!5.51e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;2.11e-13;6!UBERON:0003293;2.11e-13;6!UBERON:0003294;2.11e-13;6!UBERON:0010047;2.11e-13;6!UBERON:0003408;2.11e-13;6!UBERON:0000167;2.11e-13;6!UBERON:0004921;8.29e-10;33!UBERON:0001041;2.45e-09;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.09e-20,114;UBERON:0001044,1.84e-13,6;UBERON:0003293,1.84e-13,6;UBERON:0003294,1.84e-13,6;UBERON:0010047,1.84e-13,6;UBERON:0000167,1.84e-13,6;UBERON:0004119,6.79e-12,160;UBERON:0000925,6.79e-12,160;UBERON:0006595,6.79e-12,160;UBERON:0004921,9.91e-12,118;UBERON:0001007,7.39e-11,145;UBERON:0001555,7.39e-11,145;UBERON:0007026,7.39e-11,145;UBERON:0003408,5.47e-10,10;UBERON:0000161,1.94e-08,36;UBERON:0001004,7.72e-08,74;UBERON:0001041,1.44e-07,87 | |||
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|short_description=p1@SCNN1B | |||
}} |
Revision as of 09:42, 11 September 2013
Short description: | p1@SCNN1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SCNN1B_5end |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | 54bp_to_ENST00000343070, NM_000336, uc002dln.2_5end |
EntrezGene: | SCNN1B |
HGNC: | 10600 |
UniProt: | P51168B2R812 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.49e-07 | 3 |
acinar cell | 3.37e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.09e-20 | 114 |
saliva-secreting gland | 1.84e-13 | 6 |
gland of oral region | 1.84e-13 | 6 |
gland of foregut | 1.84e-13 | 6 |
oral gland | 1.84e-13 | 6 |
oral cavity | 1.84e-13 | 6 |
endoderm-derived structure | 6.79e-12 | 160 |
endoderm | 6.79e-12 | 160 |
presumptive endoderm | 6.79e-12 | 160 |
subdivision of digestive tract | 9.91e-12 | 118 |
digestive system | 7.39e-11 | 145 |
digestive tract | 7.39e-11 | 145 |
primitive gut | 7.39e-11 | 145 |
gland of gut | 5.47e-10 | 10 |
orifice | 1.94e-08 | 36 |
respiratory system | 7.72e-08 | 74 |
foregut | 1.44e-07 | 87 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.