FFCP PHASE1:Hg19::chr17:18088141..18088193,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54890|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=25996|TSSclassifier=S|UniProt=|association_with_transcript=71bp_to_uc010cpx.2_5end|description=CAGE_peak_8_at_ALKBH5_5end|id=chr17:18088141..18088193,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000624;1.20e-09;6!CL:0002595;1.15e-07;5|ontology_enrichment_celltype_v019_2=CL:0000624,4.78e-10,6;CL:0002595,1.05e-07,5;CL:0000359,9.37e-07,32|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.40e-07!115|ontology_enrichment_uberon_v019=UBERON:0002619;3.58e-08;22!UBERON:0001950;1.08e-07;20!UBERON:0003834;1.15e-07;5!UBERON:0001533;1.15e-07;5!UBERON:0003513;1.35e-07;7!UBERON:0000956;7.52e-07;25!UBERON:0000203;7.52e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.59e-08,22;UBERON:0001950,7.73e-08,20;UBERON:0002780,7.81e-08,41;UBERON:0001890,7.81e-08,41;UBERON:0003080,7.81e-08,41;UBERON:0006240,7.81e-08,41;UBERON:0003834,1.05e-07,5;UBERON:0001533,1.05e-07,5;UBERON:0003513,1.36e-07,7;UBERON:0000956,5.70e-07,25;UBERON:0000203,5.70e-07,25|phase1_expression=0.54503513781167,0.428201047781966,0.704772020479856,0,0.446961094427288,0.872338524100369,0,5.05375898741465,0.522371256399677,0.491467873003018,0,0,0,0.123766352960047,0.331397375727916,0,1.80808358407193,0,0.487932798790507,0.246242116153576,0,0.313454721478088,0.286235987131057,0.684372125364421,0,0.229240217243854,0.410502947249729,0.236132343941038,3.14691421479123,2.68680578668049,0.619264493264304,0.919421224478927,1.204823675113,0.369754010166788,0.0774672005803016,0.568676929949686,0,0.553995408531877,1.40381113229099,1.08505435357926,0.223915474239924,0.32389366601898,0,0.436194716338694,0,0,1.16214518452842,0.822335776043652,0.309706370895104,0,0.768482119587302,0.236482229888585,0.344745680736619,0.645484683583826,0,0.376484679085209,0.272906150057846,0.449446968890169,0.306083892370903,0.320929027076094,1.91801137739712,0.329851300186716,0.997318288108159,0.426224750532694,0.580418477257168,1.13477044938228,1.24564449799115,0,1.0429658368404,0.434377689410233,0.605399502633369,0.368277635987565,0.632924774881769,0.211255286311942,0.212604299965044,0.419317291016752,0.336985893439485,0.600707571366025,0.16072558669708,0.285012743741249,0,0.365328307529268,0,0,0.889509253863555,0.426730222566507,0,0,0,0,1.70763890732835,4.69789751496751,1.91136614062614,0,2.24203425192614,0.263384084775077,1.7703879310245,7.07419372948497,7.60725546298184,0.334372990781356,2.28145586643513,0.946895611469467,0,0.222820913770347,1.76763544484902,1.32920336750173,1.08321545506006,0.128091319725675,0.520237390239513,0,0.276350017785848,0.289803085735052,1.4828656316206,1.60524496853828,0,0.226618685395132,4.21542542962113,1.37450978193052,1.51811815211702,0,0.651083453856419,0,0.301150238155546,0.127986611154418,0,0,0,2.82249440514625,4.81392352410313,3.76543450095277,0,0,0.255725123687061,0.722878304769133,0.50133791063589,0.579386075843295,0,0.973269740605272,0.189069634328136,0.443458794925128,0.263504357079378,0.851363990735132,0,0,0,0.174129737299267,0.398873881556595,10.0166062208244,5.14795419702115,6.3147775226026,0.39752481473341,0,0.347140501607594,0,0,0.275118041940067,0.626984899610432,0.258416759169329,0.35576626268671,0,0.402829317109147,0,0.488124115096339,0.367663080345869,0,0,0,0,0,0.949265659568129,0,1.31780417436063,0,0.436094052142534,0,0.633152558322899,0.132409180813219,0,1.41867352879343,0,1.06748995729705,0,0,0.134710672069688,0,0,0,1.64025002283658,1.5608003841516,0.570471821544449,0,0.23486899728753,0.323745888736263,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,0,0.494533858557114,1.82032272387605,0,0.168336113954066,0,0.277064115484183,0,0,0,0.340296549480063,0.179389635688862,0.427114777637135,0.423863802319124,0.600182192168805,0.412210116953756,0,0.18611685633159,0.337552664482532,0.779496041289589,0.252433774244115,0.276149695926898,0,0,0.503760491138201,0.169560592310488,0.193260853163297,0.272746120590835,0.286804595389004,0.365921118388786,0,0.348581828608555,0.310983165046111,0,0.72995471815166,0,0,0,0,0,0.118306800039844,0.505754070234305,0.241011029883482,0.330881918197182,0.653638332277218,0.949082476444386,0.674156540800822,0.98110732562673,0.769494313892781,2.21446636387394,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0.402115889646523,0.0925884451585296,1.95484983186195,0,1.44331342025273,0,0.117408694235822,0.144366447761074,0,0.380508304469197,0,1.71697232418975,0,0,0,0,0.16798212819886,0.141775097242386,0.53735113621709,0.290633938513962,0,0.492663237895943,0.176096868026452,1.4512968087854,0.864719720501769,0.6312121671319,0,0.381988425558278,0,1.71072446022705,0.308482478109971,0.300343057843917,0.285826432630578,0,0,0.07333828582095,0,0,1.690605505112,0,1.04007436911366,0,0,0.266422179016099,0,0.54262160539144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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54890 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=25996 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=71bp_to_uc010cpx.2_5end | |||
|description=CAGE_peak_8_at_ALKBH5_5end | |||
|id=chr17:18088141..18088193,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000624;1.20e-09;6!CL:0002595;1.15e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,4.78e-10,6;CL:0002595,1.05e-07,5;CL:0000359,9.37e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.40e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.58e-08;22!UBERON:0001950;1.08e-07;20!UBERON:0003834;1.15e-07;5!UBERON:0001533;1.15e-07;5!UBERON:0003513;1.35e-07;7!UBERON:0000956;7.52e-07;25!UBERON:0000203;7.52e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.59e-08,22;UBERON:0001950,7.73e-08,20;UBERON:0002780,7.81e-08,41;UBERON:0001890,7.81e-08,41;UBERON:0003080,7.81e-08,41;UBERON:0006240,7.81e-08,41;UBERON:0003834,1.05e-07,5;UBERON:0001533,1.05e-07,5;UBERON:0003513,1.36e-07,7;UBERON:0000956,5.70e-07,25;UBERON:0000203,5.70e-07,25 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.704772020479856,0,0.446961094427288,0.872338524100369,0,5.05375898741465,0.522371256399677,0.491467873003018,0,0,0,0.123766352960047,0.331397375727916,0,1.80808358407193,0,0.487932798790507,0.246242116153576,0,0.313454721478088,0.286235987131057,0.684372125364421,0,0.229240217243854,0.410502947249729,0.236132343941038,3.14691421479123,2.68680578668049,0.619264493264304,0.919421224478927,1.204823675113,0.369754010166788,0.0774672005803016,0.568676929949686,0,0.553995408531877,1.40381113229099,1.08505435357926,0.223915474239924,0.32389366601898,0,0.436194716338694,0,0,1.16214518452842,0.822335776043652,0.309706370895104,0,0.768482119587302,0.236482229888585,0.344745680736619,0.645484683583826,0,0.376484679085209,0.272906150057846,0.449446968890169,0.306083892370903,0.320929027076094,1.91801137739712,0.329851300186716,0.997318288108159,0.426224750532694,0.580418477257168,1.13477044938228,1.24564449799115,0,1.0429658368404,0.434377689410233,0.605399502633369,0.368277635987565,0.632924774881769,0.211255286311942,0.212604299965044,0.419317291016752,0.336985893439485,0.600707571366025,0.16072558669708,0.285012743741249,0,0.365328307529268,0,0,0.889509253863555,0.426730222566507,0,0,0,0,1.70763890732835,4.69789751496751,1.91136614062614,0,2.24203425192614,0.263384084775077,1.7703879310245,7.07419372948497,7.60725546298184,0.334372990781356,2.28145586643513,0.946895611469467,0,0.222820913770347,1.76763544484902,1.32920336750173,1.08321545506006,0.128091319725675,0.520237390239513,0,0.276350017785848,0.289803085735052,1.4828656316206,1.60524496853828,0,0.226618685395132,4.21542542962113,1.37450978193052,1.51811815211702,0,0.651083453856419,0,0.301150238155546,0.127986611154418,0,0,0,2.82249440514625,4.81392352410313,3.76543450095277,0,0,0.255725123687061,0.722878304769133,0.50133791063589,0.579386075843295,0,0.973269740605272,0.189069634328136,0.443458794925128,0.263504357079378,0.851363990735132,0,0,0,0.174129737299267,0.398873881556595,10.0166062208244,5.14795419702115,6.3147775226026,0.39752481473341,0,0.347140501607594,0,0,0.275118041940067,0.626984899610432,0.258416759169329,0.35576626268671,0,0.402829317109147,0,0.488124115096339,0.367663080345869,0,0,0,0,0,0.949265659568129,0,1.31780417436063,0,0.436094052142534,0,0.633152558322899,0.132409180813219,0,1.41867352879343,0,1.06748995729705,0,0,0.134710672069688,0,0,0,1.64025002283658,1.5608003841516,0.570471821544449,0,0.23486899728753,0.323745888736263,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,0,0.494533858557114,1.82032272387605,0,0.168336113954066,0,0.277064115484183,0,0,0,0.340296549480063,0.179389635688862,0.427114777637135,0.423863802319124,0.600182192168805,0.412210116953756,0,0.18611685633159,0.337552664482532,0.779496041289589,0.252433774244115,0.276149695926898,0,0,0.503760491138201,0.169560592310488,0.193260853163297,0.272746120590835,0.286804595389004,0.365921118388786,0,0.348581828608555,0.310983165046111,0,0.72995471815166,0,0,0,0,0,0.118306800039844,0.505754070234305,0.241011029883482,0.330881918197182,0.653638332277218,0.949082476444386,0.674156540800822,0.98110732562673,0.769494313892781,2.21446636387394,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0.402115889646523,0.0925884451585296,1.95484983186195,0,1.44331342025273,0,0.117408694235822,0.144366447761074,0,0.380508304469197,0,1.71697232418975,0,0,0,0,0.16798212819886,0.141775097242386,0.53735113621709,0.290633938513962,0,0.492663237895943,0.176096868026452,1.4512968087854,0.864719720501769,0.6312121671319,0,0.381988425558278,0,1.71072446022705,0.308482478109971,0.300343057843917,0.285826432630578,0,0,0.07333828582095,0,0,1.690605505112,0,1.04007436911366,0,0,0.266422179016099,0,0.542621605391443,0.823240336780769,0.325736184293735,0.355391948742546,0,0.904318131178758,1.74306691720059,0.099972991182057,1.2162378064119,0.502257091432126,2.10833939483032,0.239624855491583,0,0,0.144781306667579,0,0.179060963239896,0.224170287987055,2.56139988262505,2.80315847317372,3.08023287071396,0.508189248444927,1.30139853857622,0,0,0,0,0,0.414415513436035,0,0,0,0.415941723061614,0.178428988797162,0.157702415033935,0.468565659970853,1.50473049863859,0,0,0.664225598535437,0.553107505625109,0.347534457872331,0,0,1.03384013061444,1.72571360654893,2.56146138728266,0.303127571446259,0,0,0.496215615637554,0.61384789315225,0,0.512556597022804,0.511707249066704,0.321707842287215,0,0.616838775210622,1.24293207719189,0.739144404124282,0.519254429183621,0.697262270759755,0,1.40354529212299,0.368323955743585,0.459257792658427,0.910455840033585,0.655622074797121,0.451199612907412,0.15403067420883,0.784349769176855,1.46139224653261,0.105551628892876,0,0.170093705276516,0,0,0.812839312631559,1.50506932156456,0.509752546090077,0,0.671624264166535,0.219259876645935,0.784306353074702,0.512900250232778,0,0,0.721287081534056,0.183138929636687,0.165018999841176,0,1.30012049207304,1.6068392984416,0.48335359146061,0,0.15350367472613,0.137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| |||
|short_description=p8@ALKBH5 | |||
}} |
Revision as of 12:29, 11 September 2013
Short description: | p8@ALKBH5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_ALKBH5_5end |
Coexpression cluster: | NA |
Association with transcript: | 71bp_to_uc010cpx.2_5end |
EntrezGene: | ALKBH5 |
HGNC: | 25996 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 4.78e-10 | 6 |
smooth muscle cell of the subclavian artery | 1.05e-07 | 5 |
vascular associated smooth muscle cell | 9.37e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 2.59e-08 | 22 |
neocortex | 7.73e-08 | 20 |
regional part of forebrain | 7.81e-08 | 41 |
forebrain | 7.81e-08 | 41 |
anterior neural tube | 7.81e-08 | 41 |
future forebrain | 7.81e-08 | 41 |
thoracic segment blood vessel | 1.05e-07 | 5 |
subclavian artery | 1.05e-07 | 5 |
trunk blood vessel | 1.36e-07 | 7 |
cerebral cortex | 5.70e-07 | 25 |
pallium | 5.70e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.