FFCP PHASE1:Hg19::chr17:39911359..39911373,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:39911359..39911373,-|id=chr17:39911359..39911373,-|ontology_enrichment_celltype=CL:0000066!4.65e-24!254;CL:0002076!1.81e-15!43;CL:0000223!9.34e-10!59;CL:0002251!5.92e-07!21;CL:0002368!6.10e-07!13|ontology_enrichment_celltype_v019=CL:0000362;1.18e-14;9!CL:0002159;3.78e-13;14!CL:0000317;1.70e-11;2!CL:1000448;1.70e-11;2!CL:0002308;1.70e-11;2!CL:0002140;1.70e-11;2!CL:0000312;2.82e-10;5!CL:0000240;1.22e-08;6!CL:0000311;1.22e-08;6!CL:0000079;1.22e-08;6!CL:0000237;1.22e-08;6!CL:0002144;6.02e-08;3!CL:0002231;6.02e-08;3|ontology_enrichment_celltype_v019_2=CL:0000362,1.14e-14,9;CL:0002159,2.74e-13,14;CL:0000317,1.31e-11,2;CL:1000448,1.31e-11,2;CL:0002308,1.31e-11,2;CL:0002140,1.31e-11,2;CL:0000312,3.17e-10,5;CL:0000240,1.35e-08,6;CL:0000311,1.35e-08,6;CL:0000079,1.35e-08,6;CL:0000237,1.35e-08,6;CL:0000036,1.35e-08,6;CL:0000357,1.35e-08,6;CL:0000114,1.35e-08,6;CL:0000066,1.53e-08,253;CL:0002144,4.40e-08,3;CL:0002231,9.52e-08,3;CL:0002252,7.19e-07,1;CL:0002077,8.38e-07,34|ontology_enrichment_development_v019=CL:0000357;1.22e-08;6!CL:0000114;1.22e-08;6!UBERON:0010227;5.26e-07;1|ontology_enrichment_disease=DOID:305!2.79e-09!106|ontology_enrichment_disease_v019=DOID:3151;5.26e-07;1!DOID:3149;5.26e-07;1|ontology_enrichment_disease_v019_2=DOID:3151,4.85e-07,1;DOID:3149,4.85e-07,1|ontology_enrichment_uberon=UBERON:0004119!2.39e-12!169;UBERON:0000925!2.39e-12!169;UBERON:0006595!2.39e-12!169;UBERON:0001007!2.99e-10!155;UBERON:0001555!2.99e-10!155;UBERON:0007026!2.99e-10!155;UBERON:0001004!5.92e-10!72;UBERON:0000065!3.10e-09!53;UBERON:0004921!3.37e-09!129;UBERON:0004185!3.37e-09!129;UBERON:0005153!2.02e-08!37;UBERON:0006554!3.05e-08!44;UBERON:0001008!7.21e-08!45;UBERON:0001737!8.04e-08!9;UBERON:0001557!1.99e-07!19;UBERON:0000468!2.37e-07!659;UBERON:0005911!3.59e-07!82;UBERON:0000072!4.37e-07!46;UBERON:0000161!5.52e-07!35;UBERON:0008947!6.15e-07!38;UBERON:0003258!6.15e-07!38;UBERON:0003064!8.34e-07!37|ontology_enrichment_uberon_v019=UBERON:0002419;1.70e-11;2!UBERON:0007771;1.70e-11;2!UBERON:0003297;1.70e-11;2!UBERON:0001821;1.70e-11;2!UBERON:0003487;1.70e-11;2!UBERON:0001820;1.70e-11;2!UBERON:0001003;1.07e-08;15!UBERON:0007376;1.07e-08;15!UBERON:0001723;2.80e-08;3!UBERON:0001033;2.80e-08;3!UBERON:0010523;6.02e-08;3!UBERON:0001915;6.02e-08;3!UBERON:0001982;6.02e-08;3!UBERON:0002079;5.26e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.31e-11,2;UBERON:0007771,1.31e-11,2;UBERON:0003297,1.31e-11,2;UBERON:0001821,1.31e-11,2;UBERON:0003487,1.31e-11,2;UBERON:0001820,1.31e-11,2;UBERON:0005089,1.31e-11,2;UBERON:0005088,1.31e-11,2;UBERON:0001003,1.05e-08,15;UBERON:0007376,1.05e-08,15;UBERON:0007383,1.05e-08,15;UBERON:0001723,1.92e-08,3;UBERON:0001033,1.92e-08,3;UBERON:0010056,1.92e-08,3;UBERON:0010523,4.40e-08,3;UBERON:0001915,4.40e-08,3;UBERON:0001982,4.40e-08,3;UBERON:0002079,5.43e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,1.72013755551056,4.18680700783456,0,1.58260186937072,0.247532705920093,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0,0.229240217243854,0.164201178899891,0.0787107813136792,0,0,0,0.919421224478927,0.6024118375565,0.739508020333575,0,0,0,0,0.401088894940283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545812300115692,0,0,0,0.639337125799041,0,0,0.426224750532694,0.290209238628584,0,0,0,0,0,0,0,0.316462387440884,0,0.212604299965044,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.886917589850256,0.702678285545008,0.0654895377488563,0,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0.626984899610432,0.258416759169329,0.35576626268671,1.33888245105868,0,1.52054421143703,1.46437234528902,0,0,0.446498641420399,0.44905874525234,0,1.53316637465883,0,0,0,0,1.74437620857014,0,0.12663051166458,0,0,0.354668382198357,0,0,0.74000264525148,0,0.404132016209064,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0.386521706326594,0.545492241181669,0.573609190778008,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.473227200159376,0.168584690078102,0.723033089650446,1.54411561825352,0.871517776369625,0.474541238222193,0.943819157121151,0.98110732562673,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0.491953754172454,0,2.52425656439839,1.1240175325762,1.50793458617446,0.555530670951178,0,0,0,0.115930404975077,0.234817388471643,0.721832238805369,0.925971025153221,0.570762456703795,0,0.858486162094873,0,0,0,0,0.335964256397719,0.567100388969546,0.358234090811393,1.16253575405585,1.15014803749563,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0.399891964728228,0,0,2.10833939483032,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:39911359..39911373,- | |||
|id=chr17:39911359..39911373,- | |||
|ontology_enrichment_celltype=CL:0000066!4.65e-24!254;CL:0002076!1.81e-15!43;CL:0000223!9.34e-10!59;CL:0002251!5.92e-07!21;CL:0002368!6.10e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000362;1.18e-14;9!CL:0002159;3.78e-13;14!CL:0000317;1.70e-11;2!CL:1000448;1.70e-11;2!CL:0002308;1.70e-11;2!CL:0002140;1.70e-11;2!CL:0000312;2.82e-10;5!CL:0000240;1.22e-08;6!CL:0000311;1.22e-08;6!CL:0000079;1.22e-08;6!CL:0000237;1.22e-08;6!CL:0002144;6.02e-08;3!CL:0002231;6.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000362,1.14e-14,9;CL:0002159,2.74e-13,14;CL:0000317,1.31e-11,2;CL:1000448,1.31e-11,2;CL:0002308,1.31e-11,2;CL:0002140,1.31e-11,2;CL:0000312,3.17e-10,5;CL:0000240,1.35e-08,6;CL:0000311,1.35e-08,6;CL:0000079,1.35e-08,6;CL:0000237,1.35e-08,6;CL:0000036,1.35e-08,6;CL:0000357,1.35e-08,6;CL:0000114,1.35e-08,6;CL:0000066,1.53e-08,253;CL:0002144,4.40e-08,3;CL:0002231,9.52e-08,3;CL:0002252,7.19e-07,1;CL:0002077,8.38e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000357;1.22e-08;6!CL:0000114;1.22e-08;6!UBERON:0010227;5.26e-07;1 | |||
|ontology_enrichment_disease=DOID:305!2.79e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:3151;5.26e-07;1!DOID:3149;5.26e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.85e-07,1;DOID:3149,4.85e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.39e-12!169;UBERON:0000925!2.39e-12!169;UBERON:0006595!2.39e-12!169;UBERON:0001007!2.99e-10!155;UBERON:0001555!2.99e-10!155;UBERON:0007026!2.99e-10!155;UBERON:0001004!5.92e-10!72;UBERON:0000065!3.10e-09!53;UBERON:0004921!3.37e-09!129;UBERON:0004185!3.37e-09!129;UBERON:0005153!2.02e-08!37;UBERON:0006554!3.05e-08!44;UBERON:0001008!7.21e-08!45;UBERON:0001737!8.04e-08!9;UBERON:0001557!1.99e-07!19;UBERON:0000468!2.37e-07!659;UBERON:0005911!3.59e-07!82;UBERON:0000072!4.37e-07!46;UBERON:0000161!5.52e-07!35;UBERON:0008947!6.15e-07!38;UBERON:0003258!6.15e-07!38;UBERON:0003064!8.34e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;1.70e-11;2!UBERON:0007771;1.70e-11;2!UBERON:0003297;1.70e-11;2!UBERON:0001821;1.70e-11;2!UBERON:0003487;1.70e-11;2!UBERON:0001820;1.70e-11;2!UBERON:0001003;1.07e-08;15!UBERON:0007376;1.07e-08;15!UBERON:0001723;2.80e-08;3!UBERON:0001033;2.80e-08;3!UBERON:0010523;6.02e-08;3!UBERON:0001915;6.02e-08;3!UBERON:0001982;6.02e-08;3!UBERON:0002079;5.26e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.31e-11,2;UBERON:0007771,1.31e-11,2;UBERON:0003297,1.31e-11,2;UBERON:0001821,1.31e-11,2;UBERON:0003487,1.31e-11,2;UBERON:0001820,1.31e-11,2;UBERON:0005089,1.31e-11,2;UBERON:0005088,1.31e-11,2;UBERON:0001003,1.05e-08,15;UBERON:0007376,1.05e-08,15;UBERON:0007383,1.05e-08,15;UBERON:0001723,1.92e-08,3;UBERON:0001033,1.92e-08,3;UBERON:0010056,1.92e-08,3;UBERON:0010523,4.40e-08,3;UBERON:0001915,4.40e-08,3;UBERON:0001982,4.40e-08,3;UBERON:0002079,5.43e-07,1 | |||
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| |||
|short_description=p@chr17:39911359..39911373,- | |||
}} |
Revision as of 13:38, 11 September 2013
Short description: | p@chr17:39911359..39911373, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:39911359..39911373, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epidermal cell | 1.14e-14 | 9 |
general ecto-epithelial cell | 2.74e-13 | 14 |
sebum secreting cell | 1.31e-11 | 2 |
epithelial cell of sweat gland | 1.31e-11 | 2 |
epithelial cell of skin gland | 1.31e-11 | 2 |
acinar cell of sebaceous gland | 1.31e-11 | 2 |
keratinocyte | 3.17e-10 | 5 |
stratified squamous epithelial cell | 1.35e-08 | 6 |
keratin accumulating cell | 1.35e-08 | 6 |
stratified epithelial cell | 1.35e-08 | 6 |
keratinizing barrier epithelial cell | 1.35e-08 | 6 |
epithelial fate stem cell | 1.35e-08 | 6 |
stratified epithelial stem cell | 1.35e-08 | 6 |
surface ectodermal cell | 1.35e-08 | 6 |
epithelial cell | 1.53e-08 | 253 |
capillary endothelial cell | 4.40e-08 | 3 |
epithelial cell of prostate | 9.52e-08 | 3 |
epithelial cell of esophagus | 7.19e-07 | 1 |
ecto-epithelial cell | 8.38e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
skin gland | 1.31e-11 | 2 |
epidermis gland | 1.31e-11 | 2 |
gland of integumental system | 1.31e-11 | 2 |
sebaceous gland | 1.31e-11 | 2 |
skin sebaceous gland | 1.31e-11 | 2 |
sweat gland | 1.31e-11 | 2 |
sweat gland placode | 1.31e-11 | 2 |
sebaceous gland placode | 1.31e-11 | 2 |
skin epidermis | 1.05e-08 | 15 |
outer epithelium | 1.05e-08 | 15 |
enveloping layer of ectoderm | 1.05e-08 | 15 |
tongue | 1.92e-08 | 3 |
gustatory system | 1.92e-08 | 3 |
future tongue | 1.92e-08 | 3 |
microcirculatory vessel | 4.40e-08 | 3 |
endothelium of capillary | 4.40e-08 | 3 |
capillary | 4.40e-08 | 3 |
left cardiac atrium | 5.43e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.85e-07 | 1 |
keratoacanthoma | 4.85e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.