FFCP PHASE1:Hg19::chr17:46882324..46882346,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C90|description=CAGE_peak_at_chr17:46882324..46882346,-|id=chr17:46882324..46882346,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002535;1.40e-07;2|ontology_enrichment_celltype_v019_2=CL:0002535,1.45e-07,2|ontology_enrichment_development_v019=UBERON:0006242;7.09e-14;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:171;1.85e-31;10!DOID:3095;2.53e-14;22!DOID:2994;2.53e-14;22!DOID:3193;9.86e-08;2!DOID:962;9.86e-08;2|ontology_enrichment_disease_v019_2=DOID:171,1.63e-31,10;DOID:3095,2.39e-14,22;DOID:2994,2.39e-14,22;DOID:3193,9.87e-08,2;DOID:962,9.87e-08,2;DOID:0050687,1.60e-07,143|ontology_enrichment_uberon=UBERON:0001049!2.07e-26!57;UBERON:0005068!2.07e-26!57;UBERON:0006241!2.07e-26!57;UBERON:0007135!2.07e-26!57;UBERON:0002346!2.57e-22!90;UBERON:0002616!8.29e-22!59;UBERON:0001017!2.44e-21!82;UBERON:0000955!4.13e-21!69;UBERON:0006238!4.13e-21!69;UBERON:0007023!1.71e-20!115;UBERON:0002020!1.87e-20!34;UBERON:0003528!1.87e-20!34;UBERON:0005743!7.20e-20!86;UBERON:0000073!1.65e-19!94;UBERON:0001016!1.65e-19!94;UBERON:0001893!1.45e-18!34;UBERON:0001869!3.59e-18!32;UBERON:0003075!9.97e-18!86;UBERON:0007284!9.97e-18!86;UBERON:0002780!1.11e-17!41;UBERON:0001890!1.11e-17!41;UBERON:0006240!1.11e-17!41;UBERON:0001950!1.32e-17!20;UBERON:0002791!3.28e-17!33;UBERON:0003080!4.10e-17!42;UBERON:0002619!1.05e-15!22;UBERON:0000956!2.06e-13!25;UBERON:0000203!2.06e-13!25;UBERON:0001737!8.77e-13!9;UBERON:0000200!1.13e-11!6;UBERON:0000924!1.84e-11!173;UBERON:0006601!1.84e-11!173;UBERON:0003056!5.81e-11!61;UBERON:0003076!8.23e-11!15;UBERON:0003057!8.23e-11!15;UBERON:0000033!3.74e-10!123;UBERON:0000153!6.01e-10!129;UBERON:0007811!6.01e-10!129;UBERON:0004733!4.00e-09!12;UBERON:0002028!4.00e-09!12;UBERON:0007277!4.00e-09!12;UBERON:0004121!7.50e-09!169;UBERON:0002308!7.72e-09!9;UBERON:0000125!7.72e-09!9;UBERON:0004732!2.66e-08!13;UBERON:0002298!4.62e-08!8;UBERON:0000064!7.48e-08!219;UBERON:0001557!7.48e-08!19;UBERON:0000481!2.78e-07!347;UBERON:0002680!4.50e-07!9;UBERON:0001895!4.50e-07!9;UBERON:0010092!4.50e-07!9|ontology_enrichment_uberon_v019=UBERON:0002346;2.29e-50;4!UBERON:0000923;2.29e-50;4!UBERON:0010316;2.29e-50;4!UBERON:0005291;2.29e-50;4!UBERON:0002050;2.13e-40;5!UBERON:0005423;2.13e-40;5!UBERON:0003714;9.86e-08;2!UBERON:0006955;1.40e-07;2!UBERON:0004801;1.40e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0003714,9.87e-08,2;UBERON:0006955,1.45e-07,2;UBERON:0004801,1.45e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.709840800239063,0.168584690078102,0,0.220587945464788,0.435758888184812,0.237270619111097,0.269662616320329,0.98110732562673,1.53898862778556,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14596527667483,0,0,0,0.901029173531752,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,2.71310802695722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27512572210559,0,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,11.3725799219469,0,0,0.241192877250816,0,0.331737779793674,0.295547618953547,0.219385397153973,0.871507708151921,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,0.442287822516696,0,0,0,0,0,0,0.234264445725339,0,0,0.242780379534093,0,1.20990716048664,0,0.063186579628488,0.300646838828985,0,0,0,0.313932918407225,0,0.569219092059585,0,0,0,0,0.34945333648406,0,0.0967563312890851,0,0,0,0,0,0,0,0.569797163602908,0,0,3.62870091056899,0,2.01726584015748,0,0,0,0,0,0,0,0.101998217636322,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92137407573744,0,0,0,0,0,0,0,0,0.364497339948148,0,0.945668487590378,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.646414781807753,0.13223260174269,0.342173675768659,0,0.106787412567695,0.157204305099666,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_at_chr17:46882324..46882346,- | |||
|id=chr17:46882324..46882346,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002535;1.40e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.45e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006242;7.09e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;1.85e-31;10!DOID:3095;2.53e-14;22!DOID:2994;2.53e-14;22!DOID:3193;9.86e-08;2!DOID:962;9.86e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.63e-31,10;DOID:3095,2.39e-14,22;DOID:2994,2.39e-14,22;DOID:3193,9.87e-08,2;DOID:962,9.87e-08,2;DOID:0050687,1.60e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.07e-26!57;UBERON:0005068!2.07e-26!57;UBERON:0006241!2.07e-26!57;UBERON:0007135!2.07e-26!57;UBERON:0002346!2.57e-22!90;UBERON:0002616!8.29e-22!59;UBERON:0001017!2.44e-21!82;UBERON:0000955!4.13e-21!69;UBERON:0006238!4.13e-21!69;UBERON:0007023!1.71e-20!115;UBERON:0002020!1.87e-20!34;UBERON:0003528!1.87e-20!34;UBERON:0005743!7.20e-20!86;UBERON:0000073!1.65e-19!94;UBERON:0001016!1.65e-19!94;UBERON:0001893!1.45e-18!34;UBERON:0001869!3.59e-18!32;UBERON:0003075!9.97e-18!86;UBERON:0007284!9.97e-18!86;UBERON:0002780!1.11e-17!41;UBERON:0001890!1.11e-17!41;UBERON:0006240!1.11e-17!41;UBERON:0001950!1.32e-17!20;UBERON:0002791!3.28e-17!33;UBERON:0003080!4.10e-17!42;UBERON:0002619!1.05e-15!22;UBERON:0000956!2.06e-13!25;UBERON:0000203!2.06e-13!25;UBERON:0001737!8.77e-13!9;UBERON:0000200!1.13e-11!6;UBERON:0000924!1.84e-11!173;UBERON:0006601!1.84e-11!173;UBERON:0003056!5.81e-11!61;UBERON:0003076!8.23e-11!15;UBERON:0003057!8.23e-11!15;UBERON:0000033!3.74e-10!123;UBERON:0000153!6.01e-10!129;UBERON:0007811!6.01e-10!129;UBERON:0004733!4.00e-09!12;UBERON:0002028!4.00e-09!12;UBERON:0007277!4.00e-09!12;UBERON:0004121!7.50e-09!169;UBERON:0002308!7.72e-09!9;UBERON:0000125!7.72e-09!9;UBERON:0004732!2.66e-08!13;UBERON:0002298!4.62e-08!8;UBERON:0000064!7.48e-08!219;UBERON:0001557!7.48e-08!19;UBERON:0000481!2.78e-07!347;UBERON:0002680!4.50e-07!9;UBERON:0001895!4.50e-07!9;UBERON:0010092!4.50e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.29e-50;4!UBERON:0000923;2.29e-50;4!UBERON:0010316;2.29e-50;4!UBERON:0005291;2.29e-50;4!UBERON:0002050;2.13e-40;5!UBERON:0005423;2.13e-40;5!UBERON:0003714;9.86e-08;2!UBERON:0006955;1.40e-07;2!UBERON:0004801;1.40e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,9.87e-08,2;UBERON:0006955,1.45e-07,2;UBERON:0004801,1.45e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.709840800239063,0.168584690078102,0,0.220587945464788,0.435758888184812,0.237270619111097,0.269662616320329,0.98110732562673,1.53898862778556,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14596527667483,0,0,0,0.901029173531752,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,2.71310802695722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27512572210559,0,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,11.3725799219469,0,0,0.241192877250816,0,0.331737779793674,0.295547618953547,0.219385397153973,0.871507708151921,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,0.442287822516696,0,0,0,0,0,0,0.234264445725339,0,0,0.242780379534093,0,1.20990716048664,0,0.063186579628488,0.300646838828985,0,0,0,0.313932918407225,0,0.569219092059585,0,0,0,0,0.34945333648406,0,0.0967563312890851,0,0,0,0,0,0,0,0.569797163602908,0,0,3.62870091056899,0,2.01726584015748,0,0,0,0,0,0,0,0.101998217636322,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92137407573744,0,0,0,0,0,0,0,0,0.364497339948148,0,0.945668487590378,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.646414781807753,0.13223260174269,0.342173675768659,0,0.106787412567695,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0,0,0.886068179966986,0.488105059607853,0.250381861413,0,0.443716206147409,0.745156835296601,0.138348634936231,0,0.303298235083296,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02496607435179,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86705782949428,21.6826418503717,5.4531736273961,12.8488331133846,0,0,0,0,0,0.256916900385838,1.41696576325585,0.159633859057151,0.41023272848151,0,0.760729777106397,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0.540300676947157,0,0.206686796501184,0.697573912132975,0,0,0,4.39678110899052,0,0,0,0,0,0,0,0,0.40781839786099,0.591954962065642,0,0,0.078493092850514,0.157115589916002,0,0,0.215927591218621,0,0,0,0.581207126840626,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0.853425474875886,0,0,0,0,0.233939463462106,0,0,0,0,0,0.848915739187391,0.218559560503957,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,0,0.20686599172379,0,0,0,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p@chr17:46882324..46882346,- | |||
}} |
Revision as of 14:18, 11 September 2013
Short description: | p@chr17:46882324..46882346, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:46882324..46882346, - |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.45e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 9.87e-08 | 2 |
uterine epithelium | 1.45e-07 | 2 |
cervix epithelium | 1.45e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.63e-31 | 10 |
germ cell and embryonal cancer | 2.39e-14 | 22 |
germ cell cancer | 2.39e-14 | 22 |
peripheral nerve sheath neoplasm | 9.87e-08 | 2 |
neurofibroma | 9.87e-08 | 2 |
cell type cancer | 1.60e-07 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.