FFCP PHASE1:Hg19::chr17:58212390..58212405,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C12|description=CAGE_peak_at_chr17:58212390..58212405,+|id=chr17:58212390..58212405,+|ontology_enrichment_celltype=CL:0002139!8.76e-10!24;CL:0000071!1.65e-08!18;CL:0002546!1.65e-08!18|ontology_enrichment_celltype_v019=CL:0000097;3.39e-33;5!CL:0000163;1.37e-18;9!CL:0000624;2.80e-15;6!CL:0002144;2.77e-14;3!CL:0000898;5.05e-14;3!CL:0000895;3.81e-11;1|ontology_enrichment_celltype_v019_2=CL:0000097,3.26e-33,5;CL:0002028,3.26e-33,5;CL:0000163,1.34e-18,9;CL:0000624,2.13e-15,6;CL:0002144,2.96e-14,3;CL:0000898,3.87e-14,3;CL:0000810,2.42e-11,1;CL:0000895,2.42e-11,1;CL:0002436,2.42e-11,1;CL:0002427,2.42e-11,1;CL:0002428,2.42e-11,1;CL:0002429,2.42e-11,1;CL:0002433,2.42e-11,1;CL:0002431,2.42e-11,1;CL:0002432,2.42e-11,1;CL:0002031,7.96e-07,120|ontology_enrichment_development_v019=CL:0002427;3.81e-11;1!UBERON:0004140;3.81e-11;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000055!2.06e-09!69;UBERON:0004872!4.41e-09!84;UBERON:0001981!7.44e-09!60;UBERON:0007500!7.44e-09!60;UBERON:0004537!7.44e-09!60;UBERON:0006965!7.44e-09!60;UBERON:0001986!1.65e-08!18;UBERON:0004638!1.65e-08!18;UBERON:0004852!1.65e-08!18;UBERON:0001009!3.53e-08!113;UBERON:0004535!2.58e-07!110;UBERON:0002049!2.86e-07!79;UBERON:0007798!2.86e-07!79|ontology_enrichment_uberon_v019=UBERON:0010523;2.77e-14;3!UBERON:0001915;2.77e-14;3!UBERON:0001982;2.77e-14;3!UBERON:0002171;1.18e-11;1!UBERON:0006518;1.18e-11;1!UBERON:0008949;1.18e-11;1!UBERON:0000101;1.18e-11;1!UBERON:0002167;1.18e-11;1|ontology_enrichment_uberon_v019_2=UBERON:0010523,2.96e-14,3;UBERON:0001915,2.96e-14,3;UBERON:0001982,2.96e-14,3;UBERON:0002171,1.18e-11,1;UBERON:0006518,1.18e-11,1;UBERON:0008949,1.18e-11,1;UBERON:0000101,1.18e-11,1;UBERON:0002167,1.18e-11,1;UBERON:0003081,2.19e-07,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0.575384784644301,0.512321413058201,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0.199463657621632,1.27867425159808,0,0,0,1.00499466102697,0,1.08594422352558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96513985737078,0.560508562981536,0.263384084775077,0.196709770113833,0,1.23360899399706,0,0,0,0,0,1.17842362989935,0.443067789167242,0.541607727530031,0.128091319725675,0,0,0,0,0.593146252648242,0.267540828089713,0,0,1.91610246800961,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0.258416759169329,0,0.66944122552934,0.402829317109147,3.04108842287405,1.22031028774085,0.367663080345869,0.81014194788176,0,0.22452937262617,0,3.06633274931766,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0.18611685633159,0,0,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.269662616320329,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.925971025153221,0,0,0,0,0,0,0,0,0,0,0,0,10.3459279958148,0,8.9151089682532,3.89123874225796,9.08945520669936,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0.296521128680622,0.123563938946503,0.104421949505455,0.134802265961354,0.802577647298789,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0.0882561266915003,0.225980740780532,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0.837847203816763,0.229160424011684,0,0,0.858452096273142,0.223171457441873,1.00775208730089,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0.121499113316049,0,0,0.157363764404994,0.316801009558219,0,0,0,0,0,0,0.8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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_at_chr17:58212390..58212405,+ | |||
|id=chr17:58212390..58212405,+ | |||
|ontology_enrichment_celltype=CL:0002139!8.76e-10!24;CL:0000071!1.65e-08!18;CL:0002546!1.65e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000097;3.39e-33;5!CL:0000163;1.37e-18;9!CL:0000624;2.80e-15;6!CL:0002144;2.77e-14;3!CL:0000898;5.05e-14;3!CL:0000895;3.81e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.26e-33,5;CL:0002028,3.26e-33,5;CL:0000163,1.34e-18,9;CL:0000624,2.13e-15,6;CL:0002144,2.96e-14,3;CL:0000898,3.87e-14,3;CL:0000810,2.42e-11,1;CL:0000895,2.42e-11,1;CL:0002436,2.42e-11,1;CL:0002427,2.42e-11,1;CL:0002428,2.42e-11,1;CL:0002429,2.42e-11,1;CL:0002433,2.42e-11,1;CL:0002431,2.42e-11,1;CL:0002432,2.42e-11,1;CL:0002031,7.96e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002427;3.81e-11;1!UBERON:0004140;3.81e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!2.06e-09!69;UBERON:0004872!4.41e-09!84;UBERON:0001981!7.44e-09!60;UBERON:0007500!7.44e-09!60;UBERON:0004537!7.44e-09!60;UBERON:0006965!7.44e-09!60;UBERON:0001986!1.65e-08!18;UBERON:0004638!1.65e-08!18;UBERON:0004852!1.65e-08!18;UBERON:0001009!3.53e-08!113;UBERON:0004535!2.58e-07!110;UBERON:0002049!2.86e-07!79;UBERON:0007798!2.86e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;2.77e-14;3!UBERON:0001915;2.77e-14;3!UBERON:0001982;2.77e-14;3!UBERON:0002171;1.18e-11;1!UBERON:0006518;1.18e-11;1!UBERON:0008949;1.18e-11;1!UBERON:0000101;1.18e-11;1!UBERON:0002167;1.18e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,2.96e-14,3;UBERON:0001915,2.96e-14,3;UBERON:0001982,2.96e-14,3;UBERON:0002171,1.18e-11,1;UBERON:0006518,1.18e-11,1;UBERON:0008949,1.18e-11,1;UBERON:0000101,1.18e-11,1;UBERON:0002167,1.18e-11,1;UBERON:0003081,2.19e-07,203 | |||
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|short_description=p@chr17:58212390..58212405,+ | |||
}} |
Revision as of 14:53, 11 September 2013
Short description: | p@chr17:58212390..58212405, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:58212390..58212405, + |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.26e-33 | 5 |
basophil mast progenitor cell | 3.26e-33 | 5 |
endocrine cell | 1.34e-18 | 9 |
CD4-positive, alpha-beta T cell | 2.13e-15 | 6 |
capillary endothelial cell | 2.96e-14 | 3 |
naive T cell | 3.87e-14 | 3 |
CD4-positive, alpha-beta thymocyte | 2.42e-11 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 2.42e-11 | 1 |
mature CD4 single-positive thymocyte | 2.42e-11 | 1 |
resting double-positive thymocyte | 2.42e-11 | 1 |
double-positive blast | 2.42e-11 | 1 |
CD69-positive double-positive thymocyte | 2.42e-11 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 2.42e-11 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 2.42e-11 | 1 |
CD24-positive, CD4 single-positive thymocyte | 2.42e-11 | 1 |
hematopoietic lineage restricted progenitor cell | 7.96e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 2.96e-14 | 3 |
endothelium of capillary | 2.96e-14 | 3 |
capillary | 2.96e-14 | 3 |
lower lobe of right lung | 1.18e-11 | 1 |
right lung lobe | 1.18e-11 | 1 |
lower lobe of lung | 1.18e-11 | 1 |
lobe of lung | 1.18e-11 | 1 |
right lung | 1.18e-11 | 1 |
lateral plate mesoderm | 2.19e-07 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.