FFCP PHASE1:Hg19::chr17:72760430..72760444,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C51|description=CAGE_peak_at_chr17:72760430..72760444,+|id=chr17:72760430..72760444,+|ontology_enrichment_celltype=CL:0000181!3.11e-07!12;CL:0000417!3.11e-07!12;CL:0000668!3.11e-07!12;CL:0000414!3.11e-07!12;CL:0000412!3.11e-07!12;CL:0000182!3.11e-07!12|ontology_enrichment_celltype_v019=CL:0002563;4.09e-12;4!CL:0002253;7.83e-07;2!CL:0002535;9.02e-07;2|ontology_enrichment_celltype_v019_2=CL:0002563,4.32e-12,4;CL:0002253,8.06e-07,2;CL:0002535,9.54e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:7!6.47e-07!39|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!8.16e-11!55;UBERON:0005173!8.16e-11!55;UBERON:0002417!2.05e-09!61;UBERON:0000916!2.05e-09!61;UBERON:0000160!4.18e-09!27;UBERON:0000059!4.28e-08!11;UBERON:0009569!2.28e-07!113;UBERON:0002113!4.53e-07!27;UBERON:0003918!4.53e-07!27;UBERON:0005095!4.53e-07!27;UBERON:0007687!4.53e-07!27;UBERON:0004907!5.77e-07!5|ontology_enrichment_uberon_v019=UBERON:0000160;1.30e-29;17!UBERON:0005409;4.60e-23;22!UBERON:0002108;9.23e-21;4!UBERON:0004921;1.84e-14;33!UBERON:0001301;4.07e-12;1!UBERON:0001242;4.09e-12;4!UBERON:0001262;4.09e-12;4!UBERON:0004786;4.09e-12;4!UBERON:0004808;4.09e-12;4!UBERON:0001277;4.09e-12;4!UBERON:0001155;1.15e-11;9!UBERON:0000059;1.21e-09;11!UBERON:0000485;2.69e-07;7!UBERON:0003929;2.69e-07;7!UBERON:0006955;9.02e-07;2!UBERON:0004801;9.02e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.22e-29,17;UBERON:0002108,8.93e-21,4;UBERON:0005409,2.33e-20,25;UBERON:0001301,4.31e-12,1;UBERON:0001242,4.32e-12,4;UBERON:0001262,4.32e-12,4;UBERON:0004786,4.32e-12,4;UBERON:0004808,4.32e-12,4;UBERON:0001277,4.32e-12,4;UBERON:0001155,1.09e-11,9;UBERON:0000059,1.16e-09,11;UBERON:0002113,5.17e-07,26;UBERON:0003918,5.17e-07,26;UBERON:0011143,5.17e-07,26;UBERON:0005095,5.17e-07,26;UBERON:0007687,5.17e-07,26;UBERON:0006955,9.54e-07,2;UBERON:0004801,9.54e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802320587350522,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,16.7653216637072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.518305275076852,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.88735255841436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.438675231623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00337954770971,0,0,0,0,0,2.05160100093111,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,2.01546198283421,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0.7812832832557,0.0874599999961957,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24059214301822,0,0,1.59223616106011,9.77648231893801,0,0,0,0,0,0,0,0,0,0,4.83962864194656,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.945398187686684,0.741742725430498,0.741438982396034,0.78741985211799,0,0,0,0,0,0,0,0,0,0,28.0548317985146,5.71755010671479,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.855434189421647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.91852100187456,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840816489941367,0,0.863710364874486,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,9.26089897295336,7.21246549663059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1161073620616,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:72760430..72760444,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_at_chr17:72760430..72760444,+ | |||
|id=chr17:72760430..72760444,+ | |||
|ontology_enrichment_celltype=CL:0000181!3.11e-07!12;CL:0000417!3.11e-07!12;CL:0000668!3.11e-07!12;CL:0000414!3.11e-07!12;CL:0000412!3.11e-07!12;CL:0000182!3.11e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002563;4.09e-12;4!CL:0002253;7.83e-07;2!CL:0002535;9.02e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.32e-12,4;CL:0002253,8.06e-07,2;CL:0002535,9.54e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:7!6.47e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!8.16e-11!55;UBERON:0005173!8.16e-11!55;UBERON:0002417!2.05e-09!61;UBERON:0000916!2.05e-09!61;UBERON:0000160!4.18e-09!27;UBERON:0000059!4.28e-08!11;UBERON:0009569!2.28e-07!113;UBERON:0002113!4.53e-07!27;UBERON:0003918!4.53e-07!27;UBERON:0005095!4.53e-07!27;UBERON:0007687!4.53e-07!27;UBERON:0004907!5.77e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.30e-29;17!UBERON:0005409;4.60e-23;22!UBERON:0002108;9.23e-21;4!UBERON:0004921;1.84e-14;33!UBERON:0001301;4.07e-12;1!UBERON:0001242;4.09e-12;4!UBERON:0001262;4.09e-12;4!UBERON:0004786;4.09e-12;4!UBERON:0004808;4.09e-12;4!UBERON:0001277;4.09e-12;4!UBERON:0001155;1.15e-11;9!UBERON:0000059;1.21e-09;11!UBERON:0000485;2.69e-07;7!UBERON:0003929;2.69e-07;7!UBERON:0006955;9.02e-07;2!UBERON:0004801;9.02e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.22e-29,17;UBERON:0002108,8.93e-21,4;UBERON:0005409,2.33e-20,25;UBERON:0001301,4.31e-12,1;UBERON:0001242,4.32e-12,4;UBERON:0001262,4.32e-12,4;UBERON:0004786,4.32e-12,4;UBERON:0004808,4.32e-12,4;UBERON:0001277,4.32e-12,4;UBERON:0001155,1.09e-11,9;UBERON:0000059,1.16e-09,11;UBERON:0002113,5.17e-07,26;UBERON:0003918,5.17e-07,26;UBERON:0011143,5.17e-07,26;UBERON:0005095,5.17e-07,26;UBERON:0007687,5.17e-07,26;UBERON:0006955,9.54e-07,2;UBERON:0004801,9.54e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802320587350522,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,16.7653216637072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.518305275076852,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.88735255841436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.438675231623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00337954770971,0,0,0,0,0,2.05160100093111,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,2.01546198283421,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0.7812832832557,0.0874599999961957,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24059214301822,0,0,1.59223616106011,9.77648231893801,0,0,0,0,0,0,0,0,0,0,4.83962864194656,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.945398187686684,0.741742725430498,0.741438982396034,0.78741985211799,0,0,0,0,0,0,0,0,0,0,28.0548317985146,5.71755010671479,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.855434189421647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.91852100187456,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840816489941367,0,0.863710364874486,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,9.26089897295336,7.21246549663059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1161073620616,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:72760430..72760444,+ | |||
}} |
Revision as of 15:34, 11 September 2013
Short description: | p@chr17:72760430..72760444, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:72760430..72760444, + |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.32e-12 | 4 |
epithelial cell of large intestine | 8.06e-07 | 2 |
epithelial cell of cervix | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.22e-29 | 17 |
small intestine | 8.93e-21 | 4 |
gastrointestinal system | 2.33e-20 | 25 |
epididymis | 4.31e-12 | 1 |
intestinal mucosa | 4.32e-12 | 4 |
wall of intestine | 4.32e-12 | 4 |
gastrointestinal system mucosa | 4.32e-12 | 4 |
gastrointestinal system epithelium | 4.32e-12 | 4 |
intestinal epithelium | 4.32e-12 | 4 |
colon | 1.09e-11 | 9 |
large intestine | 1.16e-09 | 11 |
kidney | 5.17e-07 | 26 |
kidney mesenchyme | 5.17e-07 | 26 |
upper urinary tract | 5.17e-07 | 26 |
kidney rudiment | 5.17e-07 | 26 |
kidney field | 5.17e-07 | 26 |
uterine epithelium | 9.54e-07 | 2 |
cervix epithelium | 9.54e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.