FFCP PHASE1:Hg19::chr19:11308457..11308472,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=25959|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29300|TSSclassifier=S|UniProt=Q9NXX5|association_with_transcript=0bp_to_uc002mqq.2_5end|description=CAGE_peak_4_at_KANK2_5end|id=chr19:11308457..11308472,-|ontology_enrichment_celltype=CL:0000055!2.39e-12!180;CL:0000183!2.12e-08!59;CL:0000680!2.96e-07!57;CL:0000056!2.96e-07!57;CL:0000355!2.96e-07!57|ontology_enrichment_celltype_v019=CL:0000669;6.13e-11;4!CL:0002575;1.48e-10;2!CL:0002549;1.68e-09;2!CL:0000632;7.11e-07;3|ontology_enrichment_celltype_v019_2=CL:0000669,9.99e-11,4;CL:0002575,1.46e-10,2;CL:0002549,7.39e-10,2;CL:0000632,6.18e-07,3;CL:0002603,9.83e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!7.14e-10!365;UBERON:0000481!4.68e-09!347;UBERON:0005256!2.13e-08!143;UBERON:0002385!9.15e-08!63;UBERON:0001015!9.15e-08!63;UBERON:0000383!9.15e-08!63;UBERON:0007023!1.40e-07!115;UBERON:0001134!3.63e-07!61;UBERON:0002036!3.63e-07!61;UBERON:0003082!3.63e-07!61;UBERON:0004290!4.05e-07!70;UBERON:0000119!6.76e-07!312;UBERON:0000468!8.58e-07!659;UBERON:0000914!9.30e-07!83;UBERON:0002329!9.30e-07!83;UBERON:0003077!9.30e-07!83;UBERON:0003059!9.30e-07!83;UBERON:0007282!9.30e-07!83;UBERON:0009618!9.30e-07!83;UBERON:0007285!9.30e-07!83|ontology_enrichment_uberon_v019=UBERON:0005629;1.68e-09;2!UBERON:0005358;1.68e-09;2!UBERON:0001886;1.68e-09;2!UBERON:0004086;1.68e-09;2!UBERON:0005282;1.68e-09;2!UBERON:0005281;1.68e-09;2!UBERON:0005284;3.18e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0005629,7.39e-10,2;UBERON:0005358,7.39e-10,2;UBERON:0001886,7.39e-10,2;UBERON:0004086,7.39e-10,2;UBERON:0005282,7.39e-10,2;UBERON:0005281,7.39e-10,2;UBERON:0005284,2.62e-08,5|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0,0,0,0,0.783556884599516,0,0,0,0,0.247532705920093,0.994192127183747,0,0,0,0.487932798790507,1.23121058076788,1.63200552995402,0.940364164434263,0,0.410623275218653,0.376627918784408,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.12786256184353,0,1.00267582127178,0.144846518960824,0.795285947051099,0,0.472674085820339,0.665188192387692,0.614843499851882,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.573673241497627,0.354668382198357,1.12135520028461,0,0.24666754841716,0.622422070799533,0.538842688278752,0.163461903113459,1.36221684880438,1.72852777344,0.234321431833797,0,0.570471821544449,0.298897361103602,0,0,0,0.204154171254893,0.368502951935304,0.413303124703062,0,0.247266929278557,0,0,0,0.125118519871964,0,1.31693286264251,0.30648779579902,0.150238058906597,0.113432183160021,0.179389635688862,0.213557388818567,0,0.300091096084402,0,0,0.37223371266318,0.675105328965065,0.292311015483596,2.52433774244115,0.736399189138395,0.646584227275248,0,0.503760491138201,0.508681776931463,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,1.38134921352481,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0,0,0,0,0,2.057870056657,1.47008711385542,0,0,0,0,0,0.343135620597051,0,0,0,0,0.325808305310325,0,0,0.463721619900307,0.70445216541493,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0.44024217006613,0.829312462163088,0.720599767084807,0.50496973370552,0.253991577168676,0,0,0,0,0.300343057843917,0.285826432630578,1.12131084345361,0,0.51336800074665,0,0,1.690605505112,0.531876233169741,0,0.771622122786426,0,0.799266537048298,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,0,0,0.718874566474748,0,1.42636905040718,0.144781306667579,0.410952645100767,0.895304816199478,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0,0,0,0,0.473107245101804,0.468565659970853,1.50473049863859,0,0,0,0.368738337083406,0,4.50342662164303,5.49029478097369,0,0,0,0,0,0,0,0.460385919864187,0,0.128139149255701,0,0,0,0.308419387605311,0.177561725313127,0,0.519254429183621,0,0,0,0,0.34444334449382,0.364182336013434,0.524497659837696,0.451199612907412,0,0.784349769176855,0,0.105551628892876,0,0.170093705276516,0,0,1.08378575017541,0.501689773854853,0,0.831076008928724,0.671624264166535,0.219259876645935,0,0,0.328014645699706,0.325378394664303,0,0.366277859273374,0.41254749960294,0,0.650060246036521,0,0.096670718292122,0.462145851343933,0.767518373630648,0.137836572484531,0.322260734604821,0.290033387828457,0.340906509664404,0.178064071293475,0,0,0,0,0,0.31481234683064,0.6970372701606,0,0.532306030317022,0,0.37064843820784,0.143124886741991,1.116475108079,0,0.190630193923825,0.767693373934002,1.28381696410176,0.95460974377781,0,0.719489830333259,0.823611089208164,0.471249609382746,0.606547444719948,0,0,0.48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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=25959 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29300 | |||
|TSSclassifier=S | |||
|UniProt=Q9NXX5 | |||
|association_with_transcript=0bp_to_uc002mqq.2_5end | |||
|description=CAGE_peak_4_at_KANK2_5end | |||
|id=chr19:11308457..11308472,- | |||
|ontology_enrichment_celltype=CL:0000055!2.39e-12!180;CL:0000183!2.12e-08!59;CL:0000680!2.96e-07!57;CL:0000056!2.96e-07!57;CL:0000355!2.96e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000669;6.13e-11;4!CL:0002575;1.48e-10;2!CL:0002549;1.68e-09;2!CL:0000632;7.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000669,9.99e-11,4;CL:0002575,1.46e-10,2;CL:0002549,7.39e-10,2;CL:0000632,6.18e-07,3;CL:0002603,9.83e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.14e-10!365;UBERON:0000481!4.68e-09!347;UBERON:0005256!2.13e-08!143;UBERON:0002385!9.15e-08!63;UBERON:0001015!9.15e-08!63;UBERON:0000383!9.15e-08!63;UBERON:0007023!1.40e-07!115;UBERON:0001134!3.63e-07!61;UBERON:0002036!3.63e-07!61;UBERON:0003082!3.63e-07!61;UBERON:0004290!4.05e-07!70;UBERON:0000119!6.76e-07!312;UBERON:0000468!8.58e-07!659;UBERON:0000914!9.30e-07!83;UBERON:0002329!9.30e-07!83;UBERON:0003077!9.30e-07!83;UBERON:0003059!9.30e-07!83;UBERON:0007282!9.30e-07!83;UBERON:0009618!9.30e-07!83;UBERON:0007285!9.30e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0005629;1.68e-09;2!UBERON:0005358;1.68e-09;2!UBERON:0001886;1.68e-09;2!UBERON:0004086;1.68e-09;2!UBERON:0005282;1.68e-09;2!UBERON:0005281;1.68e-09;2!UBERON:0005284;3.18e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,7.39e-10,2;UBERON:0005358,7.39e-10,2;UBERON:0001886,7.39e-10,2;UBERON:0004086,7.39e-10,2;UBERON:0005282,7.39e-10,2;UBERON:0005281,7.39e-10,2;UBERON:0005284,2.62e-08,5 | |||
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| |||
|short_description=p4@KANK2 | |||
}} |
Revision as of 18:39, 11 September 2013
Short description: | p4@KANK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_KANK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002mqq.2_5end |
EntrezGene: | KANK2 |
HGNC: | 29300 |
UniProt: | Q9NXX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pericyte cell | 9.99e-11 | 4 |
central nervous system pericyte | 1.46e-10 | 2 |
fibroblast of choroid plexus | 7.39e-10 | 2 |
hepatic stellate cell | 6.18e-07 | 3 |
astrocyte of the cerebellum | 9.83e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 7.39e-10 | 2 |
ventricle of nervous system | 7.39e-10 | 2 |
choroid plexus | 7.39e-10 | 2 |
brain ventricle | 7.39e-10 | 2 |
ventricular system of brain | 7.39e-10 | 2 |
ventricular system of central nervous system | 7.39e-10 | 2 |
brain vasculature | 2.62e-08 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.