FFCP PHASE1:Hg19::chr19:12883172..12883190,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C29|description=CAGE_peak_at_chr19:12883172..12883190,-|id=chr19:12883172..12883190,-|ontology_enrichment_celltype=CL:0000136!6.98e-22!15;CL:0002521!4.79e-10!3;CL:0000325!6.93e-08!39|ontology_enrichment_celltype_v019=CL:0000136;1.67e-38;13!CL:0002521;5.93e-08;3|ontology_enrichment_celltype_v019_2=CL:0000136,2.03e-33,15;CL:0002521,5.93e-08,3|ontology_enrichment_development_v019=UBERON:0008801;6.98e-21;1|ontology_enrichment_disease=DOID:114!6.91e-15!2;DOID:178!2.90e-08!1;DOID:326!2.90e-08!1;DOID:3978!2.90e-08!1;DOID:3394!2.90e-08!1;DOID:5844!2.90e-08!1;DOID:1287!7.11e-08!4|ontology_enrichment_disease_v019=DOID:114;6.70e-40;2!DOID:178;6.98e-21;1!DOID:326;6.98e-21;1!DOID:3978;6.98e-21;1!DOID:3394;6.98e-21;1!DOID:5844;6.98e-21;1!DOID:1287;1.56e-20;4|ontology_enrichment_disease_v019_2=DOID:114,5.49e-40,2;DOID:178,7.72e-21,1;DOID:326,7.72e-21,1;DOID:3978,7.72e-21,1;DOID:3394,7.72e-21,1;DOID:5844,7.72e-21,1;DOID:1287,1.41e-20,4|ontology_enrichment_uberon=UBERON:0003978!3.15e-21!3;UBERON:0009751!3.15e-21!3;UBERON:0000946!3.15e-21!3;UBERON:0002523!3.15e-21!3;UBERON:0005983!3.15e-21!3;UBERON:0002165!3.15e-21!3;UBERON:0002062!3.15e-21!3;UBERON:0007280!3.15e-21!3;UBERON:0007023!3.77e-19!115;UBERON:0002133!9.10e-15!2;UBERON:0003103!1.16e-11!69;UBERON:0007100!1.41e-11!27;UBERON:0002190!4.79e-10!3;UBERON:0004151!5.01e-10!3;UBERON:0002135!2.71e-08!1;UBERON:0001831!3.11e-08!1;UBERON:0001567!3.11e-08!1;UBERON:0008801!3.11e-08!1;UBERON:0002146!3.34e-08!1;UBERON:0005623!3.34e-08!1;UBERON:0002134!3.58e-08!1;UBERON:0005208!3.58e-08!1;UBERON:0005946!3.58e-08!1;UBERON:0005965!3.58e-08!1;UBERON:0002078!3.58e-08!1;UBERON:0002084!4.11e-08!1;UBERON:0002082!4.11e-08!1;UBERON:0004706!4.11e-08!1;UBERON:0005418!4.40e-08!1;UBERON:0001389!4.40e-08!1;UBERON:0000026!4.40e-08!1;UBERON:0008784!4.40e-08!1;UBERON:0006058!4.40e-08!1;UBERON:0003663!4.40e-08!1;UBERON:0001383!4.40e-08!1;UBERON:0004256!4.40e-08!1;UBERON:0002529!4.40e-08!1;UBERON:0004708!4.40e-08!1;UBERON:0002101!4.40e-08!1;UBERON:0004709!4.40e-08!1;UBERON:0003661!4.40e-08!1;UBERON:0002471!4.40e-08!1;UBERON:0004357!4.40e-08!1;UBERON:0009872!4.40e-08!1;UBERON:0004347!4.40e-08!1;UBERON:0005420!4.40e-08!1;UBERON:0005732!4.40e-08!1;UBERON:0006057!4.40e-08!1;UBERON:0000978!4.40e-08!1;UBERON:0002103!4.40e-08!1;UBERON:0001665!4.40e-08!1;UBERON:0003823!4.40e-08!1;UBERON:0000154!4.40e-08!1;UBERON:0005733!4.40e-08!1;UBERON:0005730!4.40e-08!1;UBERON:0001301!8.12e-08!1|ontology_enrichment_uberon_v019=UBERON:0001831;6.98e-21;1!UBERON:0002135;6.98e-21;1!UBERON:0001567;6.98e-21;1!UBERON:0001829;3.89e-11;2!UBERON:0002133;3.89e-11;2!UBERON:0004089;3.89e-11;2!UBERON:0002190;5.93e-08;3!UBERON:0003978;7.50e-08;3!UBERON:0000946;7.50e-08;3!UBERON:0007100;1.07e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0002135,6.31e-21,1;UBERON:0001831,9.43e-21,1;UBERON:0001567,9.43e-21,1;UBERON:0008801,9.43e-21,1;UBERON:0002133,3.70e-11,2;UBERON:0001829,4.52e-11,2;UBERON:0004089,4.52e-11,2;UBERON:0002190,5.93e-08,3;UBERON:0003978,7.26e-08,3;UBERON:0009751,7.26e-08,3;UBERON:0000946,7.26e-08,3;UBERON:0002523,7.26e-08,3;UBERON:0005983,7.26e-08,3;UBERON:0002165,7.26e-08,3;UBERON:0002062,7.26e-08,3;UBERON:0007280,7.26e-08,3;UBERON:0007100,3.52e-07,27|phase1_expression=0,0.642301571672949,0,0,0,0,5.06599756336621,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4906390476222,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67569440763353,0.916641696046735,0.717873024576814,1.39775300349294,1.71690419254628,0.446342914883745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_at_chr19:12883172..12883190,- | |||
|id=chr19:12883172..12883190,- | |||
|ontology_enrichment_celltype=CL:0000136!6.98e-22!15;CL:0002521!4.79e-10!3;CL:0000325!6.93e-08!39 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.67e-38;13!CL:0002521;5.93e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.03e-33,15;CL:0002521,5.93e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008801;6.98e-21;1 | |||
|ontology_enrichment_disease=DOID:114!6.91e-15!2;DOID:178!2.90e-08!1;DOID:326!2.90e-08!1;DOID:3978!2.90e-08!1;DOID:3394!2.90e-08!1;DOID:5844!2.90e-08!1;DOID:1287!7.11e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:114;6.70e-40;2!DOID:178;6.98e-21;1!DOID:326;6.98e-21;1!DOID:3978;6.98e-21;1!DOID:3394;6.98e-21;1!DOID:5844;6.98e-21;1!DOID:1287;1.56e-20;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.49e-40,2;DOID:178,7.72e-21,1;DOID:326,7.72e-21,1;DOID:3978,7.72e-21,1;DOID:3394,7.72e-21,1;DOID:5844,7.72e-21,1;DOID:1287,1.41e-20,4 | |||
|ontology_enrichment_uberon=UBERON:0003978!3.15e-21!3;UBERON:0009751!3.15e-21!3;UBERON:0000946!3.15e-21!3;UBERON:0002523!3.15e-21!3;UBERON:0005983!3.15e-21!3;UBERON:0002165!3.15e-21!3;UBERON:0002062!3.15e-21!3;UBERON:0007280!3.15e-21!3;UBERON:0007023!3.77e-19!115;UBERON:0002133!9.10e-15!2;UBERON:0003103!1.16e-11!69;UBERON:0007100!1.41e-11!27;UBERON:0002190!4.79e-10!3;UBERON:0004151!5.01e-10!3;UBERON:0002135!2.71e-08!1;UBERON:0001831!3.11e-08!1;UBERON:0001567!3.11e-08!1;UBERON:0008801!3.11e-08!1;UBERON:0002146!3.34e-08!1;UBERON:0005623!3.34e-08!1;UBERON:0002134!3.58e-08!1;UBERON:0005208!3.58e-08!1;UBERON:0005946!3.58e-08!1;UBERON:0005965!3.58e-08!1;UBERON:0002078!3.58e-08!1;UBERON:0002084!4.11e-08!1;UBERON:0002082!4.11e-08!1;UBERON:0004706!4.11e-08!1;UBERON:0005418!4.40e-08!1;UBERON:0001389!4.40e-08!1;UBERON:0000026!4.40e-08!1;UBERON:0008784!4.40e-08!1;UBERON:0006058!4.40e-08!1;UBERON:0003663!4.40e-08!1;UBERON:0001383!4.40e-08!1;UBERON:0004256!4.40e-08!1;UBERON:0002529!4.40e-08!1;UBERON:0004708!4.40e-08!1;UBERON:0002101!4.40e-08!1;UBERON:0004709!4.40e-08!1;UBERON:0003661!4.40e-08!1;UBERON:0002471!4.40e-08!1;UBERON:0004357!4.40e-08!1;UBERON:0009872!4.40e-08!1;UBERON:0004347!4.40e-08!1;UBERON:0005420!4.40e-08!1;UBERON:0005732!4.40e-08!1;UBERON:0006057!4.40e-08!1;UBERON:0000978!4.40e-08!1;UBERON:0002103!4.40e-08!1;UBERON:0001665!4.40e-08!1;UBERON:0003823!4.40e-08!1;UBERON:0000154!4.40e-08!1;UBERON:0005733!4.40e-08!1;UBERON:0005730!4.40e-08!1;UBERON:0001301!8.12e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;6.98e-21;1!UBERON:0002135;6.98e-21;1!UBERON:0001567;6.98e-21;1!UBERON:0001829;3.89e-11;2!UBERON:0002133;3.89e-11;2!UBERON:0004089;3.89e-11;2!UBERON:0002190;5.93e-08;3!UBERON:0003978;7.50e-08;3!UBERON:0000946;7.50e-08;3!UBERON:0007100;1.07e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002135,6.31e-21,1;UBERON:0001831,9.43e-21,1;UBERON:0001567,9.43e-21,1;UBERON:0008801,9.43e-21,1;UBERON:0002133,3.70e-11,2;UBERON:0001829,4.52e-11,2;UBERON:0004089,4.52e-11,2;UBERON:0002190,5.93e-08,3;UBERON:0003978,7.26e-08,3;UBERON:0009751,7.26e-08,3;UBERON:0000946,7.26e-08,3;UBERON:0002523,7.26e-08,3;UBERON:0005983,7.26e-08,3;UBERON:0002165,7.26e-08,3;UBERON:0002062,7.26e-08,3;UBERON:0007280,7.26e-08,3;UBERON:0007100,3.52e-07,27 | |||
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|short_description=p@chr19:12883172..12883190,- | |||
}} |
Revision as of 18:48, 11 September 2013
Short description: | p@chr19:12883172..12883190, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:12883172..12883190, - |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.03e-33 | 15 |
subcutaneous fat cell | 5.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mitral valve | 6.31e-21 | 1 |
parotid gland | 9.43e-21 | 1 |
cheek | 9.43e-21 | 1 |
parotid gland primordium | 9.43e-21 | 1 |
atrioventricular valve | 3.70e-11 | 2 |
major salivary gland | 4.52e-11 | 2 |
midface | 4.52e-11 | 2 |
subcutaneous adipose tissue | 5.93e-08 | 3 |
valve | 7.26e-08 | 3 |
cardiac mesenchyme | 7.26e-08 | 3 |
cardial valve | 7.26e-08 | 3 |
tunica intima | 7.26e-08 | 3 |
heart layer | 7.26e-08 | 3 |
endocardium | 7.26e-08 | 3 |
endocardial cushion | 7.26e-08 | 3 |
presumptive endocardium | 7.26e-08 | 3 |
primary circulatory organ | 3.52e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.49e-40 | 2 |
vascular disease | 7.72e-21 | 1 |
ischemia | 7.72e-21 | 1 |
extrinsic cardiomyopathy | 7.72e-21 | 1 |
myocardial ischemia | 7.72e-21 | 1 |
myocardial infarction | 7.72e-21 | 1 |
cardiovascular system disease | 1.41e-20 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.