FFCP PHASE1:Hg19::chr19:23732465..23732505,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:23732465..23732505,+|id=chr19:23732465..23732505,+|ontology_enrichment_celltype=CL:0000066!5.40e-22!254;CL:0002149!1.02e-12!6;CL:0002255!1.02e-12!6;CL:0002076!7.29e-08!43;CL:0000077!1.10e-07!19;CL:0002327!1.32e-07!4;CL:0000076!2.23e-07!62;CL:0002541!7.03e-07!3|ontology_enrichment_celltype_v019=CL:0002149;2.58e-19;6!CL:0002255;2.58e-19;6!CL:0000077;5.35e-17;19!CL:0002097;2.53e-15;2!CL:0000174;1.62e-10;3!CL:0000076;4.56e-07;63|ontology_enrichment_celltype_v019_2=CL:0002149,2.36e-19,6;CL:0002255,2.36e-19,6;CL:0000077,6.45e-17,19;CL:0002097,2.92e-15,2;CL:0000076,1.34e-13,63;CL:0000174,1.78e-10,3;CL:0000066,4.45e-08,253|ontology_enrichment_development_v019=UBERON:0005795;6.06e-07;10|ontology_enrichment_disease=DOID:0050687!5.07e-24!143;DOID:305!2.78e-23!106;DOID:14566!2.81e-20!239;DOID:162!2.95e-19!235;DOID:3001!1.02e-12!6;DOID:1749!1.35e-08!14|ontology_enrichment_disease_v019=DOID:3001;2.58e-19;6!DOID:1749;1.90e-12;14!DOID:170;3.25e-11;6!DOID:6193;5.06e-08;1|ontology_enrichment_disease_v019_2=DOID:3001,2.36e-19,6;DOID:0050687,1.31e-15,143;DOID:162,2.59e-15,235;DOID:14566,6.73e-15,239;DOID:305,8.93e-14,106;DOID:1749,2.04e-12,14;DOID:170,3.61e-11,6;DOID:6193,5.43e-08,1|ontology_enrichment_uberon=UBERON:0001737!4.97e-17!9;UBERON:0005631!3.55e-10!14;UBERON:0000158!3.55e-10!14;UBERON:0000995!9.31e-10!21;UBERON:0005795!3.41e-09!22;UBERON:0003975!3.41e-09!22;UBERON:0001557!1.28e-08!19;UBERON:0003100!1.58e-08!41;UBERON:0004175!8.81e-08!25;UBERON:0001911!1.32e-07!4;UBERON:0005333!1.32e-07!4;UBERON:0008425!1.32e-07!4;UBERON:0005311!1.32e-07!4;UBERON:0003124!3.95e-07!7;UBERON:0000476!7.03e-07!3;UBERON:0000920!7.03e-07!3|ontology_enrichment_uberon_v019=UBERON:0002369;1.62e-10;3!UBERON:0001235;1.62e-10;3!UBERON:0006858;1.62e-10;3!UBERON:0000995;2.32e-10;17!UBERON:0003975;9.00e-10;18!UBERON:0001282;1.95e-08;1!UBERON:0009842;1.95e-08;1!UBERON:0003704;1.95e-08;1!UBERON:0001171;1.95e-08;1!UBERON:0001172;1.95e-08;1!UBERON:0004175;2.42e-08;21!UBERON:0007195;2.69e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.78e-10,3;UBERON:0001235,1.78e-10,3;UBERON:0006858,1.78e-10,3;UBERON:0001282,1.88e-08,1;UBERON:0009842,1.88e-08,1;UBERON:0003704,1.88e-08,1;UBERON:0001171,1.88e-08,1;UBERON:0001172,1.88e-08,1;UBERON:0000995,2.35e-08,21;UBERON:0007195,2.50e-08,1;UBERON:0005795,5.78e-08,22;UBERON:0003975,5.78e-08,22;UBERON:0004175,5.61e-07,25|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0.591534000199219,0.505754070234305,1.20505514941741,0.992645754591546,0.217879444092406,0.237270619111097,1.07865046528132,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.358234090811393,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.315404830067869,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0.30239029332968,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20536194382929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.47748896947538,0.593929361665277,0,0,0,0.111308705022906,0,0,0,0,0,1.84083628503879,0,0,0,0,0,0,0,2.22273980289274,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871507708151921,0,0.153900517007594,3.76008784295104,0.46112780877612,0,16.2971057883012,1.27600463892768,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15231080825299,0,0,0,0,0,0,0,0,0,0,0,9.10750547295337,0.138674673013139,0.347119476670262,0,6.18120366720858,0,1.20390222730132,0.387025325156341,0.0730893170861856,0.164230914106418,0,0,0,0,0,0,8.99536360580094,0.480952921509202,0,0.799238438328521,0,0,0,0.288109595976299,0,0,0,0,1.32597682927218,0.577901179803038,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0.211200673038813,0,9.40384466865282,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:23732465..23732505,+ | |||
|id=chr19:23732465..23732505,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.40e-22!254;CL:0002149!1.02e-12!6;CL:0002255!1.02e-12!6;CL:0002076!7.29e-08!43;CL:0000077!1.10e-07!19;CL:0002327!1.32e-07!4;CL:0000076!2.23e-07!62;CL:0002541!7.03e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002149;2.58e-19;6!CL:0002255;2.58e-19;6!CL:0000077;5.35e-17;19!CL:0002097;2.53e-15;2!CL:0000174;1.62e-10;3!CL:0000076;4.56e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,2.36e-19,6;CL:0002255,2.36e-19,6;CL:0000077,6.45e-17,19;CL:0002097,2.92e-15,2;CL:0000076,1.34e-13,63;CL:0000174,1.78e-10,3;CL:0000066,4.45e-08,253 | |||
|ontology_enrichment_development_v019=UBERON:0005795;6.06e-07;10 | |||
|ontology_enrichment_disease=DOID:0050687!5.07e-24!143;DOID:305!2.78e-23!106;DOID:14566!2.81e-20!239;DOID:162!2.95e-19!235;DOID:3001!1.02e-12!6;DOID:1749!1.35e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:3001;2.58e-19;6!DOID:1749;1.90e-12;14!DOID:170;3.25e-11;6!DOID:6193;5.06e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,2.36e-19,6;DOID:0050687,1.31e-15,143;DOID:162,2.59e-15,235;DOID:14566,6.73e-15,239;DOID:305,8.93e-14,106;DOID:1749,2.04e-12,14;DOID:170,3.61e-11,6;DOID:6193,5.43e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.97e-17!9;UBERON:0005631!3.55e-10!14;UBERON:0000158!3.55e-10!14;UBERON:0000995!9.31e-10!21;UBERON:0005795!3.41e-09!22;UBERON:0003975!3.41e-09!22;UBERON:0001557!1.28e-08!19;UBERON:0003100!1.58e-08!41;UBERON:0004175!8.81e-08!25;UBERON:0001911!1.32e-07!4;UBERON:0005333!1.32e-07!4;UBERON:0008425!1.32e-07!4;UBERON:0005311!1.32e-07!4;UBERON:0003124!3.95e-07!7;UBERON:0000476!7.03e-07!3;UBERON:0000920!7.03e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002369;1.62e-10;3!UBERON:0001235;1.62e-10;3!UBERON:0006858;1.62e-10;3!UBERON:0000995;2.32e-10;17!UBERON:0003975;9.00e-10;18!UBERON:0001282;1.95e-08;1!UBERON:0009842;1.95e-08;1!UBERON:0003704;1.95e-08;1!UBERON:0001171;1.95e-08;1!UBERON:0001172;1.95e-08;1!UBERON:0004175;2.42e-08;21!UBERON:0007195;2.69e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.78e-10,3;UBERON:0001235,1.78e-10,3;UBERON:0006858,1.78e-10,3;UBERON:0001282,1.88e-08,1;UBERON:0009842,1.88e-08,1;UBERON:0003704,1.88e-08,1;UBERON:0001171,1.88e-08,1;UBERON:0001172,1.88e-08,1;UBERON:0000995,2.35e-08,21;UBERON:0007195,2.50e-08,1;UBERON:0005795,5.78e-08,22;UBERON:0003975,5.78e-08,22;UBERON:0004175,5.61e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0.591534000199219,0.505754070234305,1.20505514941741,0.992645754591546,0.217879444092406,0.237270619111097,1.07865046528132,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.358234090811393,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.315404830067869,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0.30239029332968,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20536194382929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.47748896947538,0.593929361665277,0,0,0,0.111308705022906,0,0,0,0,0,1.84083628503879,0,0,0,0,0,0,0,2.22273980289274,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871507708151921,0,0.153900517007594,3.76008784295104,0.46112780877612,0,16.2971057883012,1.27600463892768,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15231080825299,0,0,0,0,0,0,0,0,0,0,0,9.10750547295337,0.138674673013139,0.347119476670262,0,6.18120366720858,0,1.20390222730132,0.387025325156341,0.0730893170861856,0.164230914106418,0,0,0,0,0,0,8.99536360580094,0.480952921509202,0,0.799238438328521,0,0,0,0.288109595976299,0,0,0,0,1.32597682927218,0.577901179803038,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0.211200673038813,0,9.40384466865282,0,0,0,0,0,0,0,0,0.340776043570843,1.24643300672138,0,0,0,0,0,0,0,0,0,0,0,0,9.57511886655273,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0.400027764663154,0,0,0,17.7210243974719,2.14441591374926,0,1.13352962756136,0.694567422971502,3.42631386309055,0,0,1.97355644620836,0,0.192914038270915,1.01365464391844,0,0,2.12701969324168,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981477185010256,0,0.183428598521679,0.231051332300676,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333694205676207,0,0,0.840816489941367,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0.473328002922261,0.255640214277473,0,2.7492824225286,12.4082554265728,4.77769469488717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,0.101988829741982,0,0.36757959813938,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,2.24263725161227,0,0,0,0,0,0,0,0.569822880276821,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:23732465..23732505,+ | |||
}} |
Revision as of 19:45, 11 September 2013
Short description: | p@chr19:23732465..23732505, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:23732465..23732505, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 2.36e-19 | 6 |
stromal cell of endometrium | 2.36e-19 | 6 |
mesothelial cell | 6.45e-17 | 19 |
cortical cell of adrenal gland | 2.92e-15 | 2 |
squamous epithelial cell | 1.34e-13 | 63 |
steroid hormone secreting cell | 1.78e-10 | 3 |
epithelial cell | 4.45e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 1.78e-10 | 3 |
adrenal cortex | 1.78e-10 | 3 |
adrenal/interrenal gland | 1.78e-10 | 3 |
intralobular bile duct | 1.88e-08 | 1 |
acinus | 1.88e-08 | 1 |
intrahepatic bile duct | 1.88e-08 | 1 |
portal lobule | 1.88e-08 | 1 |
hepatic acinus | 1.88e-08 | 1 |
uterus | 2.35e-08 | 21 |
stroma of bone marrow | 2.50e-08 | 1 |
embryonic uterus | 5.78e-08 | 22 |
internal female genitalia | 5.78e-08 | 22 |
internal genitalia | 5.61e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 2.36e-19 | 6 |
cell type cancer | 1.31e-15 | 143 |
cancer | 2.59e-15 | 235 |
disease of cellular proliferation | 6.73e-15 | 239 |
carcinoma | 8.93e-14 | 106 |
squamous cell carcinoma | 2.04e-12 | 14 |
endocrine gland cancer | 3.61e-11 | 6 |
epithelioid sarcoma | 5.43e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.