FFCP PHASE1:Hg19::chr2:131669803..131669810,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C564|description=CAGE_peak_at_chr2:131669803..131669810,+|id=chr2:131669803..131669810,+|ontology_enrichment_celltype=CL:0002076!6.58e-31!43;CL:0000622!1.03e-23!5;CL:0002159!4.92e-22!13;CL:0000223!2.25e-21!59;CL:0000154!9.98e-20!6;CL:0002368!5.38e-17!13;CL:0002251!2.60e-16!21;CL:0002621!5.23e-15!3;CL:0002623!1.60e-14!3;CL:0000150!4.57e-13!9;CL:0000317!5.82e-11!2;CL:1000448!5.82e-11!2;CL:0002308!5.82e-11!2;CL:0002140!5.82e-11!2;CL:0000575!6.72e-11!2;CL:0001014!2.66e-10!2;CL:0001016!2.66e-10!2;CL:0000362!9.40e-10!8;CL:0000066!6.79e-09!254;CL:0002077!6.71e-08!33;CL:0000240!2.54e-07!6;CL:0000311!2.54e-07!6;CL:0000079!2.54e-07!6;CL:0000237!2.54e-07!6;CL:0000036!2.54e-07!6;CL:0000357!2.54e-07!6;CL:0000114!2.54e-07!6;CL:0000068!2.85e-07!3;CL:0000069!2.85e-07!3;CL:0000307!2.85e-07!3;CL:0000377!2.85e-07!3;CL:0002231!4.13e-07!3;CL:0000220!8.24e-07!246;CL:0002166!8.29e-07!3|ontology_enrichment_celltype_v019=CL:0000317;3.00e-40;2!CL:1000448;3.00e-40;2!CL:0002308;3.00e-40;2!CL:0000575;3.00e-40;2!CL:0002140;3.00e-40;2!CL:0002159;6.60e-23;14!CL:0000622;8.81e-17;5!CL:0000154;3.71e-14;6!CL:0000150;9.23e-10;9!CL:0000362;9.23e-10;9!CL:0002077;3.58e-09;34!CL:0002231;6.56e-08;3!CL:0000307;6.56e-08;3!CL:0002621;6.56e-08;3!CL:0002368;4.19e-07;13|ontology_enrichment_celltype_v019_2=CL:0000317,2.01e-40,2;CL:1000448,2.01e-40,2;CL:0002308,2.01e-40,2;CL:0002140,2.01e-40,2;CL:0000575,3.68e-40,2;CL:0002159,6.24e-23,14;CL:0000622,7.51e-17,5;CL:0000154,3.25e-14,6;CL:0000150,8.46e-10,9;CL:0000362,8.46e-10,9;CL:0002077,1.10e-09,34;CL:0002231,5.54e-08,3;CL:0002076,5.91e-08,42;CL:0002621,6.34e-08,3;CL:0000068,6.78e-08,3;CL:0000069,6.78e-08,3;CL:0000307,6.78e-08,3;CL:0000377,6.78e-08,3;CL:0002368,4.26e-07,13|ontology_enrichment_development_v019=UBERON:0009143;4.66e-21;1!CL:0000377;6.56e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000166!5.36e-20!21;UBERON:0001004!1.34e-18!72;UBERON:0000165!1.51e-17!28;UBERON:0000930!1.51e-17!28;UBERON:0000161!2.14e-16!35;UBERON:0001949!5.23e-15!3;UBERON:0003102!7.07e-15!95;UBERON:0001444!1.87e-13!48;UBERON:0004119!3.29e-11!169;UBERON:0000925!3.29e-11!169;UBERON:0006595!3.29e-11!169;UBERON:0003408!4.99e-11!10;UBERON:0002419!5.82e-11!2;UBERON:0007771!5.82e-11!2;UBERON:0003297!5.82e-11!2;UBERON:0001821!5.82e-11!2;UBERON:0003487!5.82e-11!2;UBERON:0001820!5.82e-11!2;UBERON:0005089!5.82e-11!2;UBERON:0005088!5.82e-11!2;UBERON:0001042!7.88e-11!10;UBERON:0009145!7.88e-11!10;UBERON:0000065!5.73e-10!53;UBERON:0006562!7.97e-10!11;UBERON:0000078!1.44e-08!18;UBERON:0001044!1.74e-07!6;UBERON:0003293!1.74e-07!6;UBERON:0003294!1.74e-07!6;UBERON:0010047!1.74e-07!6;UBERON:0000167!1.74e-07!6;UBERON:0002530!3.33e-07!59;UBERON:0001007!3.48e-07!155;UBERON:0001555!3.48e-07!155;UBERON:0007026!3.48e-07!155;UBERON:0001723!6.33e-07!3;UBERON:0001033!6.33e-07!3;UBERON:0010056!6.33e-07!3|ontology_enrichment_uberon_v019=UBERON:0002419;3.00e-40;2!UBERON:0007771;3.00e-40;2!UBERON:0003297;3.00e-40;2!UBERON:0001821;3.00e-40;2!UBERON:0003487;3.00e-40;2!UBERON:0001820;3.00e-40;2!UBERON:0000964;1.04e-20;4!UBERON:0010409;1.04e-20;4!UBERON:0010313;7.07e-09;10!UBERON:0001043;6.56e-08;3!UBERON:0001949;6.56e-08;3!UBERON:0000486;1.31e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0002419,2.01e-40,2;UBERON:0007771,2.01e-40,2;UBERON:0003297,2.01e-40,2;UBERON:0001821,2.01e-40,2;UBERON:0003487,2.01e-40,2;UBERON:0001820,2.01e-40,2;UBERON:0005089,2.01e-40,2;UBERON:0005088,2.01e-40,2;UBERON:0000964,1.15e-20,4;UBERON:0010409,1.15e-20,4;UBERON:0004348,1.15e-20,4;UBERON:0005427,1.15e-20,4;UBERON:0005085,1.37e-10,31;UBERON:0010313,7.36e-09,10;UBERON:0002342,7.36e-09,10;UBERON:0005062,7.36e-09,10;UBERON:0001949,6.34e-08,3;UBERON:0001043,8.29e-08,3;UBERON:0009143,8.29e-08,3;UBERON:0003102,4.08e-07,99|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.545492241181669,1.43402297694502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768251997860379,0,0.201057944823262,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C564 | |||
|description=CAGE_peak_at_chr2:131669803..131669810,+ | |||
|id=chr2:131669803..131669810,+ | |||
|ontology_enrichment_celltype=CL:0002076!6.58e-31!43;CL:0000622!1.03e-23!5;CL:0002159!4.92e-22!13;CL:0000223!2.25e-21!59;CL:0000154!9.98e-20!6;CL:0002368!5.38e-17!13;CL:0002251!2.60e-16!21;CL:0002621!5.23e-15!3;CL:0002623!1.60e-14!3;CL:0000150!4.57e-13!9;CL:0000317!5.82e-11!2;CL:1000448!5.82e-11!2;CL:0002308!5.82e-11!2;CL:0002140!5.82e-11!2;CL:0000575!6.72e-11!2;CL:0001014!2.66e-10!2;CL:0001016!2.66e-10!2;CL:0000362!9.40e-10!8;CL:0000066!6.79e-09!254;CL:0002077!6.71e-08!33;CL:0000240!2.54e-07!6;CL:0000311!2.54e-07!6;CL:0000079!2.54e-07!6;CL:0000237!2.54e-07!6;CL:0000036!2.54e-07!6;CL:0000357!2.54e-07!6;CL:0000114!2.54e-07!6;CL:0000068!2.85e-07!3;CL:0000069!2.85e-07!3;CL:0000307!2.85e-07!3;CL:0000377!2.85e-07!3;CL:0002231!4.13e-07!3;CL:0000220!8.24e-07!246;CL:0002166!8.29e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000317;3.00e-40;2!CL:1000448;3.00e-40;2!CL:0002308;3.00e-40;2!CL:0000575;3.00e-40;2!CL:0002140;3.00e-40;2!CL:0002159;6.60e-23;14!CL:0000622;8.81e-17;5!CL:0000154;3.71e-14;6!CL:0000150;9.23e-10;9!CL:0000362;9.23e-10;9!CL:0002077;3.58e-09;34!CL:0002231;6.56e-08;3!CL:0000307;6.56e-08;3!CL:0002621;6.56e-08;3!CL:0002368;4.19e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,2.01e-40,2;CL:1000448,2.01e-40,2;CL:0002308,2.01e-40,2;CL:0002140,2.01e-40,2;CL:0000575,3.68e-40,2;CL:0002159,6.24e-23,14;CL:0000622,7.51e-17,5;CL:0000154,3.25e-14,6;CL:0000150,8.46e-10,9;CL:0000362,8.46e-10,9;CL:0002077,1.10e-09,34;CL:0002231,5.54e-08,3;CL:0002076,5.91e-08,42;CL:0002621,6.34e-08,3;CL:0000068,6.78e-08,3;CL:0000069,6.78e-08,3;CL:0000307,6.78e-08,3;CL:0000377,6.78e-08,3;CL:0002368,4.26e-07,13 | |||
|ontology_enrichment_development_v019=UBERON:0009143;4.66e-21;1!CL:0000377;6.56e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000166!5.36e-20!21;UBERON:0001004!1.34e-18!72;UBERON:0000165!1.51e-17!28;UBERON:0000930!1.51e-17!28;UBERON:0000161!2.14e-16!35;UBERON:0001949!5.23e-15!3;UBERON:0003102!7.07e-15!95;UBERON:0001444!1.87e-13!48;UBERON:0004119!3.29e-11!169;UBERON:0000925!3.29e-11!169;UBERON:0006595!3.29e-11!169;UBERON:0003408!4.99e-11!10;UBERON:0002419!5.82e-11!2;UBERON:0007771!5.82e-11!2;UBERON:0003297!5.82e-11!2;UBERON:0001821!5.82e-11!2;UBERON:0003487!5.82e-11!2;UBERON:0001820!5.82e-11!2;UBERON:0005089!5.82e-11!2;UBERON:0005088!5.82e-11!2;UBERON:0001042!7.88e-11!10;UBERON:0009145!7.88e-11!10;UBERON:0000065!5.73e-10!53;UBERON:0006562!7.97e-10!11;UBERON:0000078!1.44e-08!18;UBERON:0001044!1.74e-07!6;UBERON:0003293!1.74e-07!6;UBERON:0003294!1.74e-07!6;UBERON:0010047!1.74e-07!6;UBERON:0000167!1.74e-07!6;UBERON:0002530!3.33e-07!59;UBERON:0001007!3.48e-07!155;UBERON:0001555!3.48e-07!155;UBERON:0007026!3.48e-07!155;UBERON:0001723!6.33e-07!3;UBERON:0001033!6.33e-07!3;UBERON:0010056!6.33e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;3.00e-40;2!UBERON:0007771;3.00e-40;2!UBERON:0003297;3.00e-40;2!UBERON:0001821;3.00e-40;2!UBERON:0003487;3.00e-40;2!UBERON:0001820;3.00e-40;2!UBERON:0000964;1.04e-20;4!UBERON:0010409;1.04e-20;4!UBERON:0010313;7.07e-09;10!UBERON:0001043;6.56e-08;3!UBERON:0001949;6.56e-08;3!UBERON:0000486;1.31e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,2.01e-40,2;UBERON:0007771,2.01e-40,2;UBERON:0003297,2.01e-40,2;UBERON:0001821,2.01e-40,2;UBERON:0003487,2.01e-40,2;UBERON:0001820,2.01e-40,2;UBERON:0005089,2.01e-40,2;UBERON:0005088,2.01e-40,2;UBERON:0000964,1.15e-20,4;UBERON:0010409,1.15e-20,4;UBERON:0004348,1.15e-20,4;UBERON:0005427,1.15e-20,4;UBERON:0005085,1.37e-10,31;UBERON:0010313,7.36e-09,10;UBERON:0002342,7.36e-09,10;UBERON:0005062,7.36e-09,10;UBERON:0001949,6.34e-08,3;UBERON:0001043,8.29e-08,3;UBERON:0009143,8.29e-08,3;UBERON:0003102,4.08e-07,99 | |||
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|short_description=p@chr2:131669803..131669810,+ | |||
}} |
Revision as of 13:29, 12 September 2013
Short description: | p@chr2:131669803..131669810, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:131669803..131669810, + |
Coexpression cluster: | C564_Small_salivary_Corneal_Bronchial_Urothelial_Keratinocyte_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 2.01e-40 | 2 |
epithelial cell of sweat gland | 2.01e-40 | 2 |
epithelial cell of skin gland | 2.01e-40 | 2 |
acinar cell of sebaceous gland | 2.01e-40 | 2 |
corneal epithelial cell | 3.68e-40 | 2 |
general ecto-epithelial cell | 6.24e-23 | 14 |
acinar cell | 7.51e-17 | 5 |
protein secreting cell | 3.25e-14 | 6 |
glandular epithelial cell | 8.46e-10 | 9 |
epidermal cell | 8.46e-10 | 9 |
ecto-epithelial cell | 1.10e-09 | 34 |
epithelial cell of prostate | 5.54e-08 | 3 |
endo-epithelial cell | 5.91e-08 | 42 |
gingival epithelial cell | 6.34e-08 | 3 |
duct epithelial cell | 6.78e-08 | 3 |
branched duct epithelial cell | 6.78e-08 | 3 |
tracheal epithelial cell | 6.78e-08 | 3 |
tracheoblast | 6.78e-08 | 3 |
respiratory epithelial cell | 4.26e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
skin gland | 2.01e-40 | 2 |
epidermis gland | 2.01e-40 | 2 |
gland of integumental system | 2.01e-40 | 2 |
sebaceous gland | 2.01e-40 | 2 |
skin sebaceous gland | 2.01e-40 | 2 |
sweat gland | 2.01e-40 | 2 |
sweat gland placode | 2.01e-40 | 2 |
sebaceous gland placode | 2.01e-40 | 2 |
cornea | 1.15e-20 | 4 |
eye surface | 1.15e-20 | 4 |
optic eminence | 1.15e-20 | 4 |
corneal primordium | 1.15e-20 | 4 |
ectodermal placode | 1.37e-10 | 31 |
neural crest-derived structure | 7.36e-09 | 10 |
neural crest | 7.36e-09 | 10 |
neural fold | 7.36e-09 | 10 |
gingival epithelium | 6.34e-08 | 3 |
esophagus | 8.29e-08 | 3 |
esophageal region | 8.29e-08 | 3 |
surface structure | 4.08e-07 | 99 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.