FFCP PHASE1:Hg19::chr2:149895246..149895261,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=130576|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=27018|TSSclassifier=S|UniProt=Q8NI32|association_with_transcript=14bp_to_ENST00000409876_5end|coexpression_cluster_id=C2661|description=CAGE_peak_2_at_LYPD6B_5end|id=chr2:149895246..149895261,+|ontology_enrichment_celltype=CL:0000066!1.44e-11!254;CL:0002076!5.96e-07!43|ontology_enrichment_celltype_v019=CL:0000197;8.51e-09;6!CL:0000098;8.51e-09;6!CL:0002167;8.51e-09;6!CL:0000075;6.75e-08;27!CL:0002077;2.44e-07;34|ontology_enrichment_celltype_v019_2=CL:0000066,7.33e-10,253;CL:0000197,8.92e-09,6;CL:0000098,8.92e-09,6;CL:0002167,8.92e-09,6;CL:0000075,5.26e-08,27;CL:0002077,1.09e-07,34|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!5.80e-08!106;DOID:1749!6.66e-08!14|ontology_enrichment_disease_v019=DOID:5093;1.13e-08;4!DOID:1612;1.13e-08;4|ontology_enrichment_disease_v019_2=DOID:5093,1.39e-08,4;DOID:1612,1.39e-08,4|ontology_enrichment_uberon=UBERON:0007625!8.43e-08!11;UBERON:0001444!8.36e-07!48|ontology_enrichment_uberon_v019=UBERON:0007625;8.08e-13;11!UBERON:0010371;7.88e-10;31!UBERON:0001456;7.16e-09;21!UBERON:0000488;1.62e-08;4!UBERON:0000019;3.81e-08;19!UBERON:0000047;3.81e-08;19!UBERON:0004088;3.81e-08;19!UBERON:0010230;3.81e-08;19!UBERON:0000020;1.07e-07;23!UBERON:0000970;1.24e-07;20!UBERON:0001801;1.31e-07;14!UBERON:0001032;2.80e-07;24!UBERON:0004456;2.80e-07;24!UBERON:0002104;3.59e-07;21|ontology_enrichment_uberon_v019_2=UBERON:0007625,4.70e-13,11;UBERON:0000488,1.83e-08,4;UBERON:0001456,1.96e-08,22;UBERON:0000019,1.06e-07,20;UBERON:0000047,1.06e-07,20;UBERON:0010312,1.06e-07,20;UBERON:0004088,1.06e-07,20;UBERON:0010230,1.06e-07,20;UBERON:0003072,1.06e-07,20;UBERON:0004128,1.06e-07,20;UBERON:0003071,1.06e-07,20;UBERON:0001801,1.38e-07,14;UBERON:0005085,1.51e-07,31;UBERON:0000020,2.87e-07,24;UBERON:0001032,2.87e-07,24;UBERON:0004456,2.87e-07,24;UBERON:0000970,3.11e-07,21;UBERON:0002104,3.11e-07,21|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0.816002764977012,0,0,0,0,0.0764134057479513,0,0,0,0,0.154816123316076,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0.400395987036012,0,0,0.954053754535364,0,1.17447437874188,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0,0,0,0.334231370655521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,1.22895262313288,3.54767035940102,3.68906099911129,0.327447688744282,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323745888736263,0.280901613404497,0,0,0,0,0.247266929278557,0,0,0,0,0,0.877955241761676,1.22595118319608,0,0,1.79389635688862,2.77624605464138,0.211931901159562,0,0,2.57640540045629,1.8611685633159,0.843881661206331,0.194874010322397,0.504867548488229,0.828449087780694,0.323292113637624,1.06502877754984,3.12331504505685,0.169560592310488,0.193260853163297,0.818238361772504,0.286804595389004,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0,0.36497735907583,3.12899064659632,0.643240938192885,4.14404764057442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,6.00487336044839,0.439001141634502,1.1240175325762,1.60846355858609,0.370353780634118,0,0,1.44331342025273,1.62302566965108,4.22671299248958,0,0,0,2.37061319387782,6.86788929675898,0,0,0,0.93733833986777,0.671928512795438,1.13420077793909,0,0,0.383382679165211,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,1.07436577943937,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,3.53550464602372,5.88815663030634,12.143085957613,5.27136367467209,0,0,0,0.664225598535437,0,0,0,0.343143423810856,0,0,0,0.909382714338778,0,0.907170879989041,0,0.306923946576125,0.280660094433074,0,2.04682899626681,0,0,0,0,0,0,0,3.50492403815704,0,2.3941057123333,0,0,0,1.35359883872224,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,2.95213181129735,1.62689197332152,0,0.27470839445503,0.41254749960294,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.330569830721956,0.384380134730212,0,1.11273558941105,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0.143411352204052,1.47373561519682,0,0,0,0,0.379473173765715,0,0.0962221127255121,0.670302275535787,0,0.188287601553558,0,0,1.33029046061003,0.229723400206959,1.52234282769651,0,0,0.238231775457789,0,0.648473311192717,0,0,1.49553699578462,0,2.69544237579135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,18.8608142942775,6.53322297831805,6.45037474408387,0,0,0.222617410045812,0,0.211125408127993,0.597743964753209,0,0,0,0,0,0,1.25314822272926,0,0.591860433821602,2.394830923469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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=130576 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27018 | |||
|TSSclassifier=S | |||
|UniProt=Q8NI32 | |||
|association_with_transcript=14bp_to_ENST00000409876_5end | |||
|coexpression_cluster_id=C2661 | |||
|description=CAGE_peak_2_at_LYPD6B_5end | |||
|id=chr2:149895246..149895261,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.44e-11!254;CL:0002076!5.96e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000197;8.51e-09;6!CL:0000098;8.51e-09;6!CL:0002167;8.51e-09;6!CL:0000075;6.75e-08;27!CL:0002077;2.44e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.33e-10,253;CL:0000197,8.92e-09,6;CL:0000098,8.92e-09,6;CL:0002167,8.92e-09,6;CL:0000075,5.26e-08,27;CL:0002077,1.09e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.80e-08!106;DOID:1749!6.66e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.13e-08;4!DOID:1612;1.13e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.39e-08,4;DOID:1612,1.39e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007625!8.43e-08!11;UBERON:0001444!8.36e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;8.08e-13;11!UBERON:0010371;7.88e-10;31!UBERON:0001456;7.16e-09;21!UBERON:0000488;1.62e-08;4!UBERON:0000019;3.81e-08;19!UBERON:0000047;3.81e-08;19!UBERON:0004088;3.81e-08;19!UBERON:0010230;3.81e-08;19!UBERON:0000020;1.07e-07;23!UBERON:0000970;1.24e-07;20!UBERON:0001801;1.31e-07;14!UBERON:0001032;2.80e-07;24!UBERON:0004456;2.80e-07;24!UBERON:0002104;3.59e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,4.70e-13,11;UBERON:0000488,1.83e-08,4;UBERON:0001456,1.96e-08,22;UBERON:0000019,1.06e-07,20;UBERON:0000047,1.06e-07,20;UBERON:0010312,1.06e-07,20;UBERON:0004088,1.06e-07,20;UBERON:0010230,1.06e-07,20;UBERON:0003072,1.06e-07,20;UBERON:0004128,1.06e-07,20;UBERON:0003071,1.06e-07,20;UBERON:0001801,1.38e-07,14;UBERON:0005085,1.51e-07,31;UBERON:0000020,2.87e-07,24;UBERON:0001032,2.87e-07,24;UBERON:0004456,2.87e-07,24;UBERON:0000970,3.11e-07,21;UBERON:0002104,3.11e-07,21 | |||
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| |||
|short_description=p2@LYPD6B | |||
}} |
Revision as of 13:57, 12 September 2013
Short description: | p2@LYPD6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LYPD6B_5end |
Coexpression cluster: | C2661_amniotic_endometrioid_squamous_Olfactory_rectal_stomach_bronchogenic |
Association with transcript: | 14bp_to_ENST00000409876_5end |
EntrezGene: | LYPD6B |
HGNC: | 27018 |
UniProt: | Q8NI32 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.33e-10 | 253 |
receptor cell | 8.92e-09 | 6 |
sensory epithelial cell | 8.92e-09 | 6 |
olfactory epithelial cell | 8.92e-09 | 6 |
columnar/cuboidal epithelial cell | 5.26e-08 | 27 |
ecto-epithelial cell | 1.09e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 4.70e-13 | 11 |
atypical epithelium | 1.83e-08 | 4 |
face | 1.96e-08 | 22 |
camera-type eye | 1.06e-07 | 20 |
simple eye | 1.06e-07 | 20 |
immature eye | 1.06e-07 | 20 |
ocular region | 1.06e-07 | 20 |
eyeball of camera-type eye | 1.06e-07 | 20 |
optic cup | 1.06e-07 | 20 |
optic vesicle | 1.06e-07 | 20 |
eye primordium | 1.06e-07 | 20 |
anterior segment of eyeball | 1.38e-07 | 14 |
ectodermal placode | 1.51e-07 | 31 |
sense organ | 2.87e-07 | 24 |
sensory system | 2.87e-07 | 24 |
entire sense organ system | 2.87e-07 | 24 |
eye | 3.11e-07 | 21 |
visual system | 3.11e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.39e-08 | 4 |
breast cancer | 1.39e-08 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.