FFCP PHASE1:Hg19::chr2:165425016..165425028,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2888|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4565|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_uc010zcv.1_5end|coexpression_cluster_id=C5|description=CAGE_peak_7_at_GRB14_5end|id=chr2:165425016..165425028,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000182;2.00e-15;12|ontology_enrichment_celltype_v019_2=CL:0000182,1.90e-15,12|ontology_enrichment_development_v019=UBERON:0008814;6.42e-07;2!UBERON:0010056;6.42e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!6.38e-34!115;UBERON:0003080!4.49e-11!42;UBERON:0001049!8.16e-10!57;UBERON:0005068!8.16e-10!57;UBERON:0006241!8.16e-10!57;UBERON:0007135!8.16e-10!57;UBERON:0002780!1.02e-09!41;UBERON:0001890!1.02e-09!41;UBERON:0006240!1.02e-09!41;UBERON:0002791!4.44e-09!33;UBERON:0004921!6.17e-09!129;UBERON:0004185!6.17e-09!129;UBERON:0001893!9.48e-09!34;UBERON:0002619!3.31e-08!22;UBERON:0002616!3.83e-08!59;UBERON:0003075!5.72e-08!86;UBERON:0007284!5.72e-08!86;UBERON:0001869!6.90e-08!32;UBERON:0002346!2.00e-07!90;UBERON:0001017!2.09e-07!82;UBERON:0004111!2.24e-07!241;UBERON:0002020!2.57e-07!34;UBERON:0003528!2.57e-07!34;UBERON:0000062!2.61e-07!511;UBERON:0001950!3.07e-07!20;UBERON:0000341!3.33e-07!2;UBERON:0001007!3.78e-07!155;UBERON:0001555!3.78e-07!155;UBERON:0007026!3.78e-07!155;UBERON:0000956!4.42e-07!25;UBERON:0000203!4.42e-07!25;UBERON:0005743!6.94e-07!86;UBERON:0000481!8.59e-07!347;UBERON:0004119!9.67e-07!169;UBERON:0000925!9.67e-07!169;UBERON:0006595!9.67e-07!169|ontology_enrichment_uberon_v019=UBERON:0001723;8.76e-16;3!UBERON:0001033;8.76e-16;3!UBERON:0002107;8.45e-15;19!UBERON:0006925;8.45e-15;19!UBERON:0001301;4.07e-12;1!UBERON:0002423;3.14e-11;25!UBERON:0003135;1.38e-09;11!UBERON:0002365;2.44e-09;31!UBERON:0002330;2.44e-09;31!UBERON:0002368;1.45e-07;33!UBERON:0000341;8.29e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.06e-15,3;UBERON:0001033,1.06e-15,3;UBERON:0010056,1.06e-15,3;UBERON:0002107,8.21e-15,19;UBERON:0006925,8.21e-15,19;UBERON:0008836,8.21e-15,19;UBERON:0008835,8.78e-13,22;UBERON:0003894,8.78e-13,22;UBERON:0009854,3.18e-12,23;UBERON:0001301,4.31e-12,1;UBERON:0007499,3.08e-11,25;UBERON:0009497,3.08e-11,25;UBERON:0000015,3.08e-11,25;UBERON:0002423,3.08e-11,25;UBERON:0006235,3.08e-11,25;UBERON:0004161,3.08e-11,25;UBERON:0009856,8.40e-11,26;UBERON:0003135,1.51e-09,11;UBERON:0005172,1.65e-09,54;UBERON:0005173,1.65e-09,54;UBERON:0002365,4.85e-09,31;UBERON:0002330,4.85e-09,31;UBERON:0002417,1.72e-08,60;UBERON:0000916,1.72e-08,60;UBERON:0002368,5.43e-08,35;UBERON:0001041,2.55e-07,87;UBERON:0000341,8.06e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37528029272598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0.446498641420399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6755034821831,10.8110993834539,3.54473944008842,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.22468147755661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36619664427641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865554558968364,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,2.41981432097328,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.290967049465258,0,0,0,0,0.126621591911757,0,0,0,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0.599037001496973,0,0.223171457441873,0,0,0,0,0,0,4.2323817051342,0,0,0.136203406111576,0,0,0,0,0,0,0,2.36417121897595,0.524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,2.34483573884932,0,0,0,1.71086837884329,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.300841313397029,0,0.781514011233092,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0.672567444437648,0,0,0.443511850813194,0,0,0,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0.329821550236287,0,0.0771741581079447,0,0,0.490296643507811,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,1.0580536810308,0,0,0,0,0,0,0,0,0,0,2.19758224832894,3.21556956187414,0,0.103432995861895,2.34557380091079,0.23806443146374,0,0,0,0,0.202117188958219,3.26575121845442,2.05339980651169,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0|short_description=p7@GRB14}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=2888 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4565 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc010zcv.1_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_7_at_GRB14_5end | |||
|id=chr2:165425016..165425028,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.00e-15;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.90e-15,12 | |||
|ontology_enrichment_development_v019=UBERON:0008814;6.42e-07;2!UBERON:0010056;6.42e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.38e-34!115;UBERON:0003080!4.49e-11!42;UBERON:0001049!8.16e-10!57;UBERON:0005068!8.16e-10!57;UBERON:0006241!8.16e-10!57;UBERON:0007135!8.16e-10!57;UBERON:0002780!1.02e-09!41;UBERON:0001890!1.02e-09!41;UBERON:0006240!1.02e-09!41;UBERON:0002791!4.44e-09!33;UBERON:0004921!6.17e-09!129;UBERON:0004185!6.17e-09!129;UBERON:0001893!9.48e-09!34;UBERON:0002619!3.31e-08!22;UBERON:0002616!3.83e-08!59;UBERON:0003075!5.72e-08!86;UBERON:0007284!5.72e-08!86;UBERON:0001869!6.90e-08!32;UBERON:0002346!2.00e-07!90;UBERON:0001017!2.09e-07!82;UBERON:0004111!2.24e-07!241;UBERON:0002020!2.57e-07!34;UBERON:0003528!2.57e-07!34;UBERON:0000062!2.61e-07!511;UBERON:0001950!3.07e-07!20;UBERON:0000341!3.33e-07!2;UBERON:0001007!3.78e-07!155;UBERON:0001555!3.78e-07!155;UBERON:0007026!3.78e-07!155;UBERON:0000956!4.42e-07!25;UBERON:0000203!4.42e-07!25;UBERON:0005743!6.94e-07!86;UBERON:0000481!8.59e-07!347;UBERON:0004119!9.67e-07!169;UBERON:0000925!9.67e-07!169;UBERON:0006595!9.67e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;8.76e-16;3!UBERON:0001033;8.76e-16;3!UBERON:0002107;8.45e-15;19!UBERON:0006925;8.45e-15;19!UBERON:0001301;4.07e-12;1!UBERON:0002423;3.14e-11;25!UBERON:0003135;1.38e-09;11!UBERON:0002365;2.44e-09;31!UBERON:0002330;2.44e-09;31!UBERON:0002368;1.45e-07;33!UBERON:0000341;8.29e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.06e-15,3;UBERON:0001033,1.06e-15,3;UBERON:0010056,1.06e-15,3;UBERON:0002107,8.21e-15,19;UBERON:0006925,8.21e-15,19;UBERON:0008836,8.21e-15,19;UBERON:0008835,8.78e-13,22;UBERON:0003894,8.78e-13,22;UBERON:0009854,3.18e-12,23;UBERON:0001301,4.31e-12,1;UBERON:0007499,3.08e-11,25;UBERON:0009497,3.08e-11,25;UBERON:0000015,3.08e-11,25;UBERON:0002423,3.08e-11,25;UBERON:0006235,3.08e-11,25;UBERON:0004161,3.08e-11,25;UBERON:0009856,8.40e-11,26;UBERON:0003135,1.51e-09,11;UBERON:0005172,1.65e-09,54;UBERON:0005173,1.65e-09,54;UBERON:0002365,4.85e-09,31;UBERON:0002330,4.85e-09,31;UBERON:0002417,1.72e-08,60;UBERON:0000916,1.72e-08,60;UBERON:0002368,5.43e-08,35;UBERON:0001041,2.55e-07,87;UBERON:0000341,8.06e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37528029272598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0.446498641420399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6755034821831,10.8110993834539,3.54473944008842,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.22468147755661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36619664427641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865554558968364,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,2.41981432097328,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.290967049465258,0,0,0,0,0.126621591911757,0,0,0,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0.599037001496973,0,0.223171457441873,0,0,0,0,0,0,4.2323817051342,0,0,0.136203406111576,0,0,0,0,0,0,0,2.36417121897595,0.524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,2.34483573884932,0,0,0,1.71086837884329,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.300841313397029,0,0.781514011233092,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0.672567444437648,0,0,0.443511850813194,0,0,0,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0.329821550236287,0,0.0771741581079447,0,0,0.490296643507811,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,1.0580536810308,0,0,0,0,0,0,0,0,0,0,2.19758224832894,3.21556956187414,0,0.103432995861895,2.34557380091079,0.23806443146374,0,0,0,0,0.202117188958219,3.26575121845442,2.05339980651169,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@GRB14 | |||
}} |
Revision as of 14:27, 12 September 2013
Short description: | p7@GRB14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_GRB14_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_uc010zcv.1_5end |
EntrezGene: | GRB14 |
HGNC: | 4565 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.90e-15 | 12 |
Ontology term | p-value | n |
---|---|---|
tongue | 1.06e-15 | 3 |
gustatory system | 1.06e-15 | 3 |
future tongue | 1.06e-15 | 3 |
liver | 8.21e-15 | 19 |
digestive gland | 8.21e-15 | 19 |
liver bud | 8.21e-15 | 19 |
hepatic diverticulum | 8.78e-13 | 22 |
liver primordium | 8.78e-13 | 22 |
digestive tract diverticulum | 3.18e-12 | 23 |
epididymis | 4.31e-12 | 1 |
epithelial sac | 3.08e-11 | 25 |
epithelium of foregut-midgut junction | 3.08e-11 | 25 |
anatomical boundary | 3.08e-11 | 25 |
hepatobiliary system | 3.08e-11 | 25 |
foregut-midgut junction | 3.08e-11 | 25 |
septum transversum | 3.08e-11 | 25 |
sac | 8.40e-11 | 26 |
male reproductive organ | 1.51e-09 | 11 |
abdomen element | 1.65e-09 | 54 |
abdominal segment element | 1.65e-09 | 54 |
exocrine gland | 4.85e-09 | 31 |
exocrine system | 4.85e-09 | 31 |
abdominal segment of trunk | 1.72e-08 | 60 |
abdomen | 1.72e-08 | 60 |
endocrine gland | 5.43e-08 | 35 |
foregut | 2.55e-07 | 87 |
throat | 8.06e-07 | 2 |
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