FFCP PHASE1:Hg19::chr2:166790366..166790383,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=100506134|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000440322,NR_038983,NR_038984,uc002udm.1_5end|coexpression_cluster_id=C182|description=CAGE_peak_1_at_LOC100506134_5end|id=chr2:166790366..166790383,+|ontology_enrichment_celltype=CL:0002541!1.29e-21!3;CL:0000313!2.63e-16!1;CL:0002537!2.37e-13!5;CL:0000159!8.09e-09!2|ontology_enrichment_celltype_v019=CL:0002541;1.37e-44;3!CL:0000349;3.66e-28;19!CL:0002537;3.55e-27;5!CL:1000497;8.07e-09;17!CL:0002518;8.07e-09;17!CL:0000134;1.55e-08;55|ontology_enrichment_celltype_v019_2=CL:0002541,1.53e-44,3;CL:0000349,3.79e-28,19;CL:0002537,3.55e-27,5;CL:1000497,7.91e-09,17;CL:0002518,7.91e-09,17|ontology_enrichment_development_v019=UBERON:0003918;2.75e-14;10!UBERON:0007687;2.75e-14;10|ontology_enrichment_disease=DOID:2152!2.63e-16!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!1.86e-27!14;UBERON:0000158!1.86e-27!14;UBERON:0000476!1.29e-21!3;UBERON:0000920!1.29e-21!3;UBERON:0003124!2.32e-20!7;UBERON:0004911!2.63e-16!1;UBERON:0000478!4.54e-16!24;UBERON:0000305!8.35e-10!7;UBERON:0004909!8.09e-09!2;UBERON:0004871!1.09e-08!8;UBERON:0004923!9.27e-07!57|ontology_enrichment_uberon_v019=UBERON:0005631;9.63e-53;10!UBERON:0000158;9.63e-53;10!UBERON:0003124;1.37e-44;3!UBERON:0000920;1.37e-44;3!UBERON:0000478;1.87e-22;24!UBERON:0000305;9.49e-20;7!UBERON:0004923;3.04e-07;55|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.53e-44,3;UBERON:0005631,6.59e-38,14;UBERON:0000158,6.59e-38,14;UBERON:0000478,1.93e-22,24;UBERON:0003124,8.62e-20,7;UBERON:0000305,9.49e-20,7;UBERON:0004871,2.01e-17,8;UBERON:0004923,1.52e-08,66|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,0,2.76444631889309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27600463892768,0,4.79731298416771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,26.9909489023277,2.8665101273223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@LOC100506134}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=100506134 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000440322,NR_038983,NR_038984,uc002udm.1_5end | |||
|coexpression_cluster_id=C182 | |||
|description=CAGE_peak_1_at_LOC100506134_5end | |||
|id=chr2:166790366..166790383,+ | |||
|ontology_enrichment_celltype=CL:0002541!1.29e-21!3;CL:0000313!2.63e-16!1;CL:0002537!2.37e-13!5;CL:0000159!8.09e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.37e-44;3!CL:0000349;3.66e-28;19!CL:0002537;3.55e-27;5!CL:1000497;8.07e-09;17!CL:0002518;8.07e-09;17!CL:0000134;1.55e-08;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.53e-44,3;CL:0000349,3.79e-28,19;CL:0002537,3.55e-27,5;CL:1000497,7.91e-09,17;CL:0002518,7.91e-09,17 | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.75e-14;10!UBERON:0007687;2.75e-14;10 | |||
|ontology_enrichment_disease=DOID:2152!2.63e-16!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.86e-27!14;UBERON:0000158!1.86e-27!14;UBERON:0000476!1.29e-21!3;UBERON:0000920!1.29e-21!3;UBERON:0003124!2.32e-20!7;UBERON:0004911!2.63e-16!1;UBERON:0000478!4.54e-16!24;UBERON:0000305!8.35e-10!7;UBERON:0004909!8.09e-09!2;UBERON:0004871!1.09e-08!8;UBERON:0004923!9.27e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;9.63e-53;10!UBERON:0000158;9.63e-53;10!UBERON:0003124;1.37e-44;3!UBERON:0000920;1.37e-44;3!UBERON:0000478;1.87e-22;24!UBERON:0000305;9.49e-20;7!UBERON:0004923;3.04e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.53e-44,3;UBERON:0005631,6.59e-38,14;UBERON:0000158,6.59e-38,14;UBERON:0000478,1.93e-22,24;UBERON:0003124,8.62e-20,7;UBERON:0000305,9.49e-20,7;UBERON:0004871,2.01e-17,8;UBERON:0004923,1.52e-08,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,0,2.76444631889309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27600463892768,0,4.79731298416771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,26.9909489023277,2.8665101273223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@LOC100506134 | |||
}} |
Revision as of 14:30, 12 September 2013
Short description: | p1@LOC100506134 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC100506134_5end |
Coexpression cluster: | C182_renal_mature_mesothelioma_lung_Mammary_Adipocyte_acute |
Association with transcript: | 0bp_to_ENST00000440322, NR_038983, NR_038984, uc002udm.1_5end |
EntrezGene: | LOC100506134 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.53e-44 | 3 |
extraembryonic cell | 3.79e-28 | 19 |
amnion mesenchymal stem cell | 3.55e-27 | 5 |
kidney cell | 7.91e-09 | 17 |
kidney epithelial cell | 7.91e-09 | 17 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.53e-44 | 3 |
extraembryonic membrane | 6.59e-38 | 14 |
membranous layer | 6.59e-38 | 14 |
extraembryonic structure | 1.93e-22 | 24 |
chorion | 8.62e-20 | 7 |
amnion | 9.49e-20 | 7 |
somatic layer of lateral plate mesoderm | 2.01e-17 | 8 |
organ component layer | 1.52e-08 | 66 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.