FFCP PHASE1:Hg19::chr2:216252918..216252935,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C243|description=CAGE_peak_at_chr2:216252918..216252935,-|id=chr2:216252918..216252935,-|ontology_enrichment_celltype=CL:0000055!2.63e-21!180;CL:0000057!3.59e-17!75;CL:0002371!1.78e-14!591;CL:0000048!3.88e-13!430;CL:0000723!8.51e-13!436;CL:0000144!1.52e-12!625;CL:0000034!7.22e-12!444;CL:0000680!2.91e-10!57;CL:0000056!2.91e-10!57;CL:0000355!2.91e-10!57;CL:0000183!1.55e-09!59;CL:0000548!2.52e-09!679;CL:0000004!2.52e-09!679;CL:0000255!2.52e-09!679;CL:0002620!4.57e-09!23;CL:0000012!4.70e-09!682;CL:0000187!1.05e-08!54;CL:0002334!1.23e-07!12;CL:0000393!1.45e-07!60;CL:0000211!1.45e-07!60;CL:0002494!1.63e-07!16;CL:0002320!3.14e-07!365|ontology_enrichment_celltype_v019=CL:1000306;1.23e-10;4!CL:0002547;1.23e-10;4!CL:0002583;2.38e-09;2!CL:0002570;5.85e-09;8!CL:0002541;7.03e-07;3|ontology_enrichment_celltype_v019_2=CL:1000306,1.98e-10,4;CL:0002547,1.98e-10,4;CL:0002583,3.22e-09,2;CL:0002570,4.06e-09,8;CL:0002541,5.33e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!3.30e-09!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!1.52e-10!84;UBERON:0002385!4.93e-09!63;UBERON:0001015!4.93e-09!63;UBERON:0000383!4.93e-09!63;UBERON:0001134!5.86e-09!61;UBERON:0002036!5.86e-09!61;UBERON:0003082!5.86e-09!61;UBERON:0004290!9.82e-09!70;UBERON:0000914!1.38e-08!83;UBERON:0002329!1.38e-08!83;UBERON:0003077!1.38e-08!83;UBERON:0003059!1.38e-08!83;UBERON:0007282!1.38e-08!83;UBERON:0009618!1.38e-08!83;UBERON:0007285!1.38e-08!83;UBERON:0002384!7.55e-08!375;UBERON:0000486!1.01e-07!82;UBERON:0001637!2.55e-07!42;UBERON:0003509!2.55e-07!42;UBERON:0004572!2.55e-07!42;UBERON:0003914!3.03e-07!118;UBERON:0005256!4.56e-07!143|ontology_enrichment_uberon_v019=UBERON:0004797;1.23e-10;4!UBERON:0000415;1.23e-10;4!UBERON:0007240;1.23e-10;4!UBERON:0005742;1.23e-10;4!UBERON:0005734;1.23e-10;4!UBERON:0004664;1.23e-10;4!UBERON:0004663;1.23e-10;4!UBERON:0001013;1.47e-10;14!UBERON:0005406;2.38e-09;2!UBERON:0003124;7.03e-07;3!UBERON:0000920;7.03e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001013,7.91e-11,14;UBERON:0000415,1.98e-10,4;UBERON:0007240,1.98e-10,4;UBERON:0005742,1.98e-10,4;UBERON:0005734,1.98e-10,4;UBERON:0004664,1.98e-10,4;UBERON:0004663,1.98e-10,4;UBERON:0005406,1.10e-09,2;UBERON:0000920,5.33e-07,3|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0,1.74467704820074,0,0.631719873426831,0,0.491467873003018,0,0.436882744260345,0.263766978228454,0.37129905888014,0.331397375727916,0.672325146451775,0,0,0.975865597581014,0,0.204000691244253,0,0,0,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.511450247374121,0,0,0.434539556882471,5.5670016293577,18.0054902011975,0.0945348171640679,0,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.993943903390637,0.633152558322899,3.17782033951725,2.0078563452417,1.06400514659507,0,1.06748995729705,0.24666754841716,0.622422070799533,0.404132016209064,0.653847612453835,0.454072282934794,4.03323147135999,0,0.312160076830321,1.1409436430889,0.597794722207204,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0.300476117813194,0.226864366320042,0.89694817844431,0.427114777637135,1.05965950579781,0.900273288253207,0.309157587715317,0.515281080091258,0.744467425326359,1.5189869901714,0.292311015483596,2.27190396819703,0.276149695926898,0,0.355009592516614,0.503760491138201,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0.258543431515556,0,1.690605505112,0,0,0.771622122786426,1.41849132023278,0.266422179016099,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0.958499421966331,1.14861935834114,0,0.289562613335158,2.05476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,1.07057393278297,0.630809660135739,0.35142424497814,0,0,0,0.664225598535437,0.368738337083406,0.0868836144680828,0.195801157462741,1.02943027143257,0,0,0,0.303127571446259,0,0.604780586659361,0.496215615637554,0.767309866440312,0.561320188866147,0.256278298511402,0,0.804269605718038,1.48418066444991,1.07946785661859,1.24293207719189,0.574890092096664,0,0.581051892299796,0,0.802025881213139,0,0.114814448164607,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.5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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C243 | |||
|description=CAGE_peak_at_chr2:216252918..216252935,- | |||
|id=chr2:216252918..216252935,- | |||
|ontology_enrichment_celltype=CL:0000055!2.63e-21!180;CL:0000057!3.59e-17!75;CL:0002371!1.78e-14!591;CL:0000048!3.88e-13!430;CL:0000723!8.51e-13!436;CL:0000144!1.52e-12!625;CL:0000034!7.22e-12!444;CL:0000680!2.91e-10!57;CL:0000056!2.91e-10!57;CL:0000355!2.91e-10!57;CL:0000183!1.55e-09!59;CL:0000548!2.52e-09!679;CL:0000004!2.52e-09!679;CL:0000255!2.52e-09!679;CL:0002620!4.57e-09!23;CL:0000012!4.70e-09!682;CL:0000187!1.05e-08!54;CL:0002334!1.23e-07!12;CL:0000393!1.45e-07!60;CL:0000211!1.45e-07!60;CL:0002494!1.63e-07!16;CL:0002320!3.14e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:1000306;1.23e-10;4!CL:0002547;1.23e-10;4!CL:0002583;2.38e-09;2!CL:0002570;5.85e-09;8!CL:0002541;7.03e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,1.98e-10,4;CL:0002547,1.98e-10,4;CL:0002583,3.22e-09,2;CL:0002570,4.06e-09,8;CL:0002541,5.33e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.30e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.52e-10!84;UBERON:0002385!4.93e-09!63;UBERON:0001015!4.93e-09!63;UBERON:0000383!4.93e-09!63;UBERON:0001134!5.86e-09!61;UBERON:0002036!5.86e-09!61;UBERON:0003082!5.86e-09!61;UBERON:0004290!9.82e-09!70;UBERON:0000914!1.38e-08!83;UBERON:0002329!1.38e-08!83;UBERON:0003077!1.38e-08!83;UBERON:0003059!1.38e-08!83;UBERON:0007282!1.38e-08!83;UBERON:0009618!1.38e-08!83;UBERON:0007285!1.38e-08!83;UBERON:0002384!7.55e-08!375;UBERON:0000486!1.01e-07!82;UBERON:0001637!2.55e-07!42;UBERON:0003509!2.55e-07!42;UBERON:0004572!2.55e-07!42;UBERON:0003914!3.03e-07!118;UBERON:0005256!4.56e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.23e-10;4!UBERON:0000415;1.23e-10;4!UBERON:0007240;1.23e-10;4!UBERON:0005742;1.23e-10;4!UBERON:0005734;1.23e-10;4!UBERON:0004664;1.23e-10;4!UBERON:0004663;1.23e-10;4!UBERON:0001013;1.47e-10;14!UBERON:0005406;2.38e-09;2!UBERON:0003124;7.03e-07;3!UBERON:0000920;7.03e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,7.91e-11,14;UBERON:0000415,1.98e-10,4;UBERON:0007240,1.98e-10,4;UBERON:0005742,1.98e-10,4;UBERON:0005734,1.98e-10,4;UBERON:0004664,1.98e-10,4;UBERON:0004663,1.98e-10,4;UBERON:0005406,1.10e-09,2;UBERON:0000920,5.33e-07,3 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0,1.74467704820074,0,0.631719873426831,0,0.491467873003018,0,0.436882744260345,0.263766978228454,0.37129905888014,0.331397375727916,0.672325146451775,0,0,0.975865597581014,0,0.204000691244253,0,0,0,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.511450247374121,0,0,0.434539556882471,5.5670016293577,18.0054902011975,0.0945348171640679,0,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.993943903390637,0.633152558322899,3.17782033951725,2.0078563452417,1.06400514659507,0,1.06748995729705,0.24666754841716,0.622422070799533,0.404132016209064,0.653847612453835,0.454072282934794,4.03323147135999,0,0.312160076830321,1.1409436430889,0.597794722207204,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0.300476117813194,0.226864366320042,0.89694817844431,0.427114777637135,1.05965950579781,0.900273288253207,0.309157587715317,0.515281080091258,0.744467425326359,1.5189869901714,0.292311015483596,2.27190396819703,0.276149695926898,0,0.355009592516614,0.503760491138201,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0.258543431515556,0,1.690605505112,0,0,0.771622122786426,1.41849132023278,0.266422179016099,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0.958499421966331,1.14861935834114,0,0.289562613335158,2.05476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,1.07057393278297,0.630809660135739,0.35142424497814,0,0,0,0.664225598535437,0.368738337083406,0.0868836144680828,0.195801157462741,1.02943027143257,0,0,0,0.303127571446259,0,0.604780586659361,0.496215615637554,0.767309866440312,0.561320188866147,0.256278298511402,0,0.804269605718038,1.48418066444991,1.07946785661859,1.24293207719189,0.574890092096664,0,0.581051892299796,0,0.802025881213139,0,0.114814448164607,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0,0,0,0,3.21367859688319,0,0.308097234229289,0.460511024178389,0.137836572484531,0.859361958946189,0.580066775656914,1.02271952899321,0.267096106940212,0.165284915360978,0,1.02090169995667,0.10115778085555,0,4.09256050879832,0,0.924100740528266,0,0,0.55597265731176,0.715624433709956,0,0,0,0,0,0,1.56989728039846,0.359744915166629,0,0.471249609382746,0.606547444719948,0,0,0,0.243713489631284,0,0,0.141405431953713,1.13008116620243,0,0.66343897524122,0.438450885253763,0.578775534266688,0,0.202910376962704,0.6196469961995,0.845086807596724,0,0.0982490410131212,0.35667105148125,0,0.633322905892992,0.329294892959902,0.379473173765715,0,0,1.34060455107157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0.593929361665277,0,0,0,2.56010021552684,0,0,0.19924798825107,0,0,0,0,2.79935628895627,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,1.5950057986596,0.274792780205587,5.33034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0.787831823072237,0.164831716762333,0.0674035438541849,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0.326587360109409,0,0,1.02232813071253,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0.895528817321244,3.27198633786114,2.77402930751307,0.947015026375446,0.251567901752575,2.66943366478961,0.686520205190771,1.66354016139563,0.777186002913902,0.443565449968902,0.318593534327405,0.449803112163605,0.931577741257556,0,1.86089200190596,0.521745061811734,0.300515217994437,0.380805212168795,0.813741466409323,0.909243296012797,0.859284456339908,0.928067519756987,2.3885753321917,0,1.37358282073117,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0.327609848846413,0,0,0,0,0,0,0,0.139879507719444,0,0,0,1.57265941855896,0,0,0.425149840203366,0.495743057036009,0,0.636008701306837,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,2.42046082444224,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0.118332000730565,0.0852134047591577,0,0.22910686854405,0.31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| |||
|short_description=p@chr2:216252918..216252935,- | |||
}} |
Revision as of 16:34, 12 September 2013
Short description: | p@chr2:216252918..216252935, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:216252918..216252935, - |
Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 1.98e-10 | 4 |
fibroblast of the aortic adventitia | 1.98e-10 | 4 |
subcutaneous preadipocyte | 3.22e-09 | 2 |
mesenchymal stem cell of adipose | 4.06e-09 | 8 |
chorionic membrane mesenchymal stem cell | 5.33e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 7.91e-11 | 14 |
artery wall | 1.98e-10 | 4 |
tunica adventitia of artery | 1.98e-10 | 4 |
adventitia | 1.98e-10 | 4 |
tunica adventitia of blood vessel | 1.98e-10 | 4 |
aorta tunica adventitia | 1.98e-10 | 4 |
aorta wall | 1.98e-10 | 4 |
perirenal fat | 1.10e-09 | 2 |
egg chorion | 5.33e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.