FFCP PHASE1:Hg19::chr2:220436352..220436379,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23363|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29092|TSSclassifier=S|UniProt=O75147,A4KVA4,Q9H8B3|association_with_transcript=-84bp_to_ENST00000265318,NM_001173408,NM_001173431,NM_015311_5end|description=CAGE_peak_7_at_OBSL1_5end|id=chr2:220436352..220436379,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000349;2.19e-11;19!CL:0002541;4.37e-10;3!CL:0000136;4.84e-10;13!CL:0002536;4.88e-07;2|ontology_enrichment_celltype_v019_2=CL:0000349,2.05e-11,19;CL:0002541,3.44e-10,3;CL:0000136,6.11e-09,15;CL:0002536,7.92e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;5.92e-07;2|ontology_enrichment_disease_v019_2=DOID:114,7.69e-07,2|ontology_enrichment_uberon=UBERON:0004923!2.82e-11!57;UBERON:0007023!1.20e-09!115;UBERON:0000475!2.29e-08!365;UBERON:0000064!2.57e-07!219;UBERON:0005631!4.05e-07!14;UBERON:0000158!4.05e-07!14|ontology_enrichment_uberon_v019=UBERON:0005631;2.87e-18;10!UBERON:0000158;2.87e-18;10!UBERON:0000478;3.70e-13;24!UBERON:0000305;1.67e-10;7!UBERON:0003124;4.37e-10;3!UBERON:0000920;4.37e-10;3!UBERON:0003688;3.66e-08;6!UBERON:0002358;3.66e-08;6!UBERON:0003684;3.66e-08;6!UBERON:0001178;3.66e-08;6!UBERON:0000310;8.37e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.15e-20,14;UBERON:0000158,4.15e-20,14;UBERON:0000478,3.44e-13,24;UBERON:0004923,1.08e-12,66;UBERON:0003124,2.70e-11,7;UBERON:0000305,1.80e-10,7;UBERON:0000920,3.44e-10,3;UBERON:0004871,4.10e-09,8;UBERON:0003688,6.15e-08,6;UBERON:0002358,6.15e-08,6;UBERON:0003684,6.15e-08,6;UBERON:0001178,6.15e-08,6;UBERON:0000310,4.78e-07,10|phase1_expression=0.54503513781167,1.92690471501885,2.67813367782345,2.00146596706261,0.446961094427288,1.74467704820074,0,0,1.56711376919903,0.491467873003018,0,1.09220686065086,3.16520373874144,0.495065411840187,0.331397375727916,0,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0.626909442956176,0,0,0,0,0,0,0,0,0.464448369948228,0,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.724232594804119,0.795285947051099,2.91980922181582,0,0,0.087834785693126,0.523916301990851,1.09288586487763,1.11235332835329,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,1.74437620857014,0.496971951695318,0.379891534993739,0.662045904066094,0.573673241497627,1.06400514659507,0,0,0.49333509683432,0,0.269421344139376,0,0.302714855289863,0,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0.323745888736263,0,0,0.122834317311768,0.103325781175765,1.18800285728205,1.23633464639278,0,0,0,0.125118519871964,0,0.877955241761676,0.30648779579902,0.45071417671979,0.113432183160021,0.179389635688862,0,0,0.600182192168805,0.412210116953756,0.772921620136887,0.18611685633159,0.168776332241266,0.389748020644795,0.252433774244115,0.368199594569197,0.484938170456436,1.42003837006646,0.10075209822764,0.169560592310488,0.386521706326594,0,0.286804595389004,0.121973706129595,0,0,0,0,0,1.56449532329816,1.92972281457866,0,0.464367928031979,0,0.946454400318751,0.337169380156203,0.241011029883482,0.441175890929576,0.217879444092406,0.237270619111097,0.539325232640658,0.392442930250692,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0.658501712451753,0,0.301586917234893,0.277765335475589,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0,0,0,0,1.71697232418975,0,0,0,0,0.335964256397719,0.141775097242386,0,0.581267877027924,1.15014803749563,0,0,0,0.144119953416961,0,0.126995788584338,0.381988425558278,1.17217447210047,0,0.102827492703324,0,0,0,0.43596006883328,0.07333828582095,0,7.15312891703765,0,0.26593811658487,0,0.514414748524284,0,0.266422179016099,0.285955987316295,0,0,0,0,0,0.602878754119172,1.74306691720059,0,0,0,0,0,0,0,0.289562613335158,1.02738161275192,0.179060963239896,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0.356857977594324,0.315404830067869,0.234282829985426,2.70851489754947,4.5481500811197,1.03473071292505,0,0.553107505625109,0.521301686808497,0.195801157462741,1.37257369524342,0,0,0,0.909382714338778,0,3.93107381328584,1.48864684691266,1.38115775959256,0.841980283299221,1.40953064181271,1.02341449813341,0.321707842287215,0,0.154209693802656,0.177561725313127,0.164254312027618,0.519254429183621,0.116210378459959,0,0.601519410909855,0.0920809889358963,0,0.364182336013434,0.524497659837696,0.451199612907412,0.15403067420883,1.56869953835371,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.512900250232778,0.984043937099117,0.325378394664303,1.03041011647722,0.0915694648183434,0,0.574265537996172,0.650060246036521,0,0.580024309752732,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0.170453254832202,0.890320356467374,0.330569830721956,0,0.127612712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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23363 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29092 | |||
|TSSclassifier=S | |||
|UniProt=O75147,A4KVA4,Q9H8B3 | |||
|association_with_transcript=-84bp_to_ENST00000265318,NM_001173408,NM_001173431,NM_015311_5end | |||
|description=CAGE_peak_7_at_OBSL1_5end | |||
|id=chr2:220436352..220436379,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.19e-11;19!CL:0002541;4.37e-10;3!CL:0000136;4.84e-10;13!CL:0002536;4.88e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.05e-11,19;CL:0002541,3.44e-10,3;CL:0000136,6.11e-09,15;CL:0002536,7.92e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;5.92e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,7.69e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004923!2.82e-11!57;UBERON:0007023!1.20e-09!115;UBERON:0000475!2.29e-08!365;UBERON:0000064!2.57e-07!219;UBERON:0005631!4.05e-07!14;UBERON:0000158!4.05e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.87e-18;10!UBERON:0000158;2.87e-18;10!UBERON:0000478;3.70e-13;24!UBERON:0000305;1.67e-10;7!UBERON:0003124;4.37e-10;3!UBERON:0000920;4.37e-10;3!UBERON:0003688;3.66e-08;6!UBERON:0002358;3.66e-08;6!UBERON:0003684;3.66e-08;6!UBERON:0001178;3.66e-08;6!UBERON:0000310;8.37e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.15e-20,14;UBERON:0000158,4.15e-20,14;UBERON:0000478,3.44e-13,24;UBERON:0004923,1.08e-12,66;UBERON:0003124,2.70e-11,7;UBERON:0000305,1.80e-10,7;UBERON:0000920,3.44e-10,3;UBERON:0004871,4.10e-09,8;UBERON:0003688,6.15e-08,6;UBERON:0002358,6.15e-08,6;UBERON:0003684,6.15e-08,6;UBERON:0001178,6.15e-08,6;UBERON:0000310,4.78e-07,10 | |||
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| |||
|short_description=p7@OBSL1 | |||
}} |
Revision as of 17:01, 12 September 2013
Short description: | p7@OBSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_OBSL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -84bp_to_ENST00000265318, NM_001173408, NM_001173431, NM_015311_5end |
EntrezGene: | OBSL1 |
HGNC: | 29092 |
UniProt: | O75147A4KVA4Q9H8B3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.05e-11 | 19 |
chorionic membrane mesenchymal stem cell | 3.44e-10 | 3 |
fat cell | 6.11e-09 | 15 |
amniotic epithelial cell | 7.92e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.15e-20 | 14 |
membranous layer | 4.15e-20 | 14 |
extraembryonic structure | 3.44e-13 | 24 |
organ component layer | 1.08e-12 | 66 |
chorion | 2.70e-11 | 7 |
amnion | 1.80e-10 | 7 |
egg chorion | 3.44e-10 | 3 |
somatic layer of lateral plate mesoderm | 4.10e-09 | 8 |
omentum | 6.15e-08 | 6 |
peritoneum | 6.15e-08 | 6 |
abdominal cavity | 6.15e-08 | 6 |
visceral peritoneum | 6.15e-08 | 6 |
breast | 4.78e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
heart disease | 7.69e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.