FFCP PHASE1:Hg19::chr20:54967074..54967088,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6790|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11393|TSSclassifier=S|UniProt=Q5QPD2|association_with_transcript=98bp_to_ENST00000422322_5end|description=CAGE_peak_3_at_AURKA_5end|id=chr20:54967074..54967088,-|ontology_enrichment_celltype=CL:0000548!6.10e-07!679;CL:0000004!6.10e-07!679;CL:0000255!6.10e-07!679|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0008947;1.71e-09;29|ontology_enrichment_disease=DOID:14566!1.93e-22!239;DOID:162!3.72e-21!235;DOID:0050687!6.87e-14!143;DOID:305!2.91e-13!106;DOID:0050686!5.59e-09!137|ontology_enrichment_disease_v019=DOID:0060060;1.85e-12;1!DOID:0060061;1.85e-12;1!DOID:8691;1.85e-12;1!DOID:3493;7.39e-07;2|ontology_enrichment_disease_v019_2=DOID:0060060,1.25e-12,1;DOID:0060061,1.25e-12,1;DOID:8691,1.25e-12,1;DOID:14566,5.45e-07,239;DOID:3493,8.06e-07,2|ontology_enrichment_uberon=UBERON:0001737!5.12e-08!9;UBERON:0001557!1.95e-07!19|ontology_enrichment_uberon_v019=UBERON:0001737;5.75e-20;9!UBERON:0001557;5.75e-20;9!UBERON:0007195;1.85e-12;1|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.90e-20,9;UBERON:0007195,2.75e-12,1;UBERON:0001557,9.93e-10,19;UBERON:0008947,2.78e-07,38;UBERON:0003258,2.78e-07,38|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0.737201809504527,0,0.436882744260345,0,0,0,0,0.602694528023977,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0.85870796139317,0.273748850145768,0,0.305653622991805,0.57470412614962,0.629686250509434,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0.283604451492204,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0,0.835979866147242,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0.625098097988558,0,0,0,0.949265659568129,0.183201743930407,0,0,0,0,0.25326102332916,0,0.286836620748814,0,0.560677600142307,0,0,0,0.134710672069688,0.163461903113459,0.454072282934794,0,0,0,0.570471821544449,0.149448680551801,0.352303495931295,0.809364721840658,0.561803226808994,0.816616685019573,0.122834317311768,0.309977343527296,0,0,0.910161361938026,0,0.673344455816265,0.250237039743928,0.277064115484183,0,0,0,0.340296549480063,0.358779271377724,0,0.423863802319124,0,0.103052529238439,0.257640540045629,0,0,0.292311015483596,0,0,0,0,0.604512589365842,0.508681776931463,0.193260853163297,0.272746120590835,0,0.121973706129595,0.132529768321485,0.116193942869518,0.414644220061482,0,0,0,0,0,0,0,1.30137480043828,1.34867752062481,1.44606617930089,1.54411561825352,0.871517776369625,0.71181185733329,0.674156540800822,0.588664395376038,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0.245976877086227,0.343135620597051,0,0,0.201057944823262,0,0.325808305310325,0,0,0.115930404975077,0,0,0.925971025153221,0.190254152234598,0.790204397959275,0,0,0.234004265139238,0.148631162288728,0.93733833986777,0.16798212819886,0.425325291727159,0.53735113621709,0.581267877027924,0.766765358330422,0,0.088048434013226,0,0,0,0.190493682876507,0.381988425558278,0,0,0,0.300343057843917,0,0.784917590417525,0,0.5867062865676,0.129271715757778,0,0,0,0,0.514414748524284,0,0.266422179016099,0,0,0.823240336780769,0.325736184293735,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.434343920002738,0.205476322550383,0.179060963239896,0.560425719967636,0,0,0,0.508189248444927,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0.462629081407967,0,0.98552587216571,0,0.348631135379878,0,0.40101294060657,0,0,0.182091168006717,0,0,0.462092022626489,0,0,0.316654886678627,0,0,0.215915916102139,0,0.541892875087706,0,0.764628819135115,0,0.223874754722178,0.438519753291869,0.784306353074702,0.256450125116389,0,0,0,0.366277859273374,0.330037999682352,0.574265537996172,0.650060246036521,0,0,0.154048617114644,0.460511024178389,0.827019434907183,0.107420244868274,0.145016693914229,0.0852266274161009,0.178064071293475,0,0.192190067365106,0,0,0,0,0,0.308033580176089,0,0,0,0.429374660225974,0,0.632758849437452,0,0.511795582622668,0,0,0,0.179872457583315,0.54907405947211,0.235624804691373,0,1.58510321173008,0,0.48763373908959,0,0,0.409499734223957,0,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0.281695602532241,0.286822704408103,0.196498082026242,0.35667105148125,0,0,0,0,0,0.384888450902048,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0.540031437238115,0.79312517629427,0.213648142254946,0,0.735120647943095,0,0,0.284567373393656,0.159426272728822,0.199579371432817,0.191505370132367,0.423347165447766,0.973865820823666,0.280797178113459,0.228234679033192,0,0,0.338583555603207,0.321176150207399,0,0.4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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6790 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11393 | |||
|TSSclassifier=S | |||
|UniProt=Q5QPD2 | |||
|association_with_transcript=98bp_to_ENST00000422322_5end | |||
|description=CAGE_peak_3_at_AURKA_5end | |||
|id=chr20:54967074..54967088,- | |||
|ontology_enrichment_celltype=CL:0000548!6.10e-07!679;CL:0000004!6.10e-07!679;CL:0000255!6.10e-07!679 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.71e-09;29 | |||
|ontology_enrichment_disease=DOID:14566!1.93e-22!239;DOID:162!3.72e-21!235;DOID:0050687!6.87e-14!143;DOID:305!2.91e-13!106;DOID:0050686!5.59e-09!137 | |||
|ontology_enrichment_disease_v019=DOID:0060060;1.85e-12;1!DOID:0060061;1.85e-12;1!DOID:8691;1.85e-12;1!DOID:3493;7.39e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.25e-12,1;DOID:0060061,1.25e-12,1;DOID:8691,1.25e-12,1;DOID:14566,5.45e-07,239;DOID:3493,8.06e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.12e-08!9;UBERON:0001557!1.95e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.75e-20;9!UBERON:0001557;5.75e-20;9!UBERON:0007195;1.85e-12;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.90e-20,9;UBERON:0007195,2.75e-12,1;UBERON:0001557,9.93e-10,19;UBERON:0008947,2.78e-07,38;UBERON:0003258,2.78e-07,38 | |||
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| |||
|short_description=p3@AURKA | |||
}} |
Revision as of 09:15, 12 September 2013
Short description: | p3@AURKA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_AURKA_5end |
Coexpression cluster: | NA |
Association with transcript: | 98bp_to_ENST00000422322_5end |
EntrezGene: | AURKA |
HGNC: | 11393 |
UniProt: | Q5QPD2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 2.90e-20 | 9 |
stroma of bone marrow | 2.75e-12 | 1 |
upper respiratory tract | 9.93e-10 | 19 |
respiratory primordium | 2.78e-07 | 38 |
endoderm of foregut | 2.78e-07 | 38 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.25e-12 | 1 |
cutaneous T cell lymphoma | 1.25e-12 | 1 |
mycosis fungoides | 1.25e-12 | 1 |
disease of cellular proliferation | 5.45e-07 | 239 |
signet ring cell adenocarcinoma | 8.06e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.