FFCP PHASE1:Hg19::chr20:62669224..62669244,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=27655|TSSclassifier=W|UniProt=|association_with_transcript=-240bp_to_ENST00000463337_5end|coexpression_cluster_id=C4064|description=CAGE_peak_2_at_LINC00176_5end|id=chr20:62669224..62669244,+|ontology_enrichment_celltype=CL:0002139!8.51e-20!24;CL:0000115!2.65e-16!35;CL:0000071!1.48e-15!18;CL:0002546!1.48e-15!18;CL:0002078!4.92e-15!44;CL:0002543!3.05e-09!6;CL:0000213!8.15e-09!57;CL:0000215!8.15e-09!57|ontology_enrichment_celltype_v019=CL:0002139;1.17e-27;24!CL:0000071;4.89e-24;18!CL:0000115;3.68e-20;36!CL:0002543;1.46e-19;6!CL:0002078;1.18e-11;45!CL:0002144;9.10e-11;3!CL:0002618;1.63e-10;3!CL:0000213;8.92e-10;58!CL:0000215;8.92e-10;58|ontology_enrichment_celltype_v019_2=CL:0002139,9.58e-28,24;CL:0000115,1.27e-25,36;CL:0000071,4.97e-24,18;CL:0002546,4.97e-24,18;CL:0002543,9.51e-20,6;CL:0002078,1.40e-19,45;CL:0000213,3.46e-14,58;CL:0000215,3.46e-14,58;CL:0002144,1.04e-10,3;CL:0002618,1.23e-10,3;CL:0000838,3.25e-07,52;CL:0000542,4.97e-07,53;CL:0000051,4.97e-07,53|ontology_enrichment_development_v019=CL:0002546;4.89e-24;18!UBERON:0006215;8.95e-11;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!1.48e-15!18;UBERON:0004638!1.48e-15!18;UBERON:0004852!1.48e-15!18;UBERON:0000487!2.01e-13!22;UBERON:0006914!1.11e-12!25;UBERON:0001638!1.26e-07!9;UBERON:0003920!1.26e-07!9;UBERON:0004582!1.26e-07!9|ontology_enrichment_uberon_v019=UBERON:0004638;4.89e-24;18!UBERON:0001986;4.89e-24;18!UBERON:0004852;4.89e-24;18!UBERON:0000487;3.60e-19;22!UBERON:0006914;1.52e-16;25!UBERON:0001638;7.99e-13;9!UBERON:0003920;7.99e-13;9!UBERON:0004582;7.99e-13;9!UBERON:0000490;8.34e-11;33!UBERON:0010523;9.10e-11;3!UBERON:0001915;9.10e-11;3!UBERON:0001982;9.10e-11;3!UBERON:0002370;1.79e-07;2!UBERON:0005058;1.79e-07;2!UBERON:0009113;1.79e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0004638,4.97e-24,18;UBERON:0001986,4.97e-24,18;UBERON:0004852,4.97e-24,18;UBERON:0000487,3.65e-19,22;UBERON:0006914,1.53e-16,25;UBERON:0001638,6.06e-13,9;UBERON:0003920,6.06e-13,9;UBERON:0004582,6.06e-13,9;UBERON:0010523,1.04e-10,3;UBERON:0001915,1.04e-10,3;UBERON:0001982,1.04e-10,3;UBERON:0000055,9.74e-09,68;UBERON:0002049,3.61e-07,78;UBERON:0007798,3.61e-07,78|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,7.18286014030742,4.92603536699674,5.35233312933019,0,0,0.154816123316076,0,0,0,0,0,0,1.10799081706375,0,1.08505435357926,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,6.09800287352883,0,4.31763147898969,0.167186495390678,0,2.36723902867367,0,0.557052284425868,0.294605907474837,1.77227115666897,1.35401931882508,1.15282187753108,1.56071217071854,1.80881695064044,2.21080014228679,1.44901542867526,0,3.21048993707656,2.09071047609954,0.113309342697566,0,4.12352934579156,0.759059076058509,0,0,0,0,0.127986611154418,0,0,0,1.41124720257313,0,5.79297615531196,0,0,0.383587685530591,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,2.42998351125316,1.13061588384802,0,0.825354125820202,0.417989933073621,1.8089173141853,2.49036383880697,4.35136796594071,2.01414658554573,1.52054421143703,5.6134273236079,0,2.43042584364528,2.94689103337463,2.2452937262617,1.68917220724983,1.53316637465883,3.79706263827252,3.48083313467774,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,0.215627574859517,1.41177339907723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0.680374821106063,1.51141141271498,6.16909010761157,0.270946437543853,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.91547074219827,0,0,0,0,0,0,0,0.988823245360557,0,0.19924798825107,0,0.503865495708552,0,22.7706890102979,0,0,0,0,0,0,0,0,0,0,0.520855522170466,9.09583999960435,0,0.1137934482855,0.254253650292766,1.65471377237555,0.344743373241465,0,0,0,0,3.05163472634166,1.99042667876204,3.54657142744257,0.219385397153973,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0.611030144933625,5.04085918757057,10.3793708715062,13.5748534357092,0,0.802577647298789,0,0,0.19566461893209,0,0.394584402849391,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.859930162358083,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,2.73771935828724,0.0801588202515337,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,35.2269054734281,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,2.97699613087171,0,0,0,0.544017803369474,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,9.19942020932677,0,0,0,0,0,0,0,0.323474434190045,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0.183428598521679,0,0,0,0,0.225630985047772,0,0,0,0,1.03499260351932,0,0,0,0,0.546974809018219,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0.0679697329768317,0,0.118193840883968,0.222462803784138,0.078493092850514,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.447421727191169,0,0,0,0,1.1598144313382,0,0.701818390386317,15.120258912264,0,0,0,1.81155412280008,0.771741581079447,0,0,0,0.471353094203252,0,0,0,0,0.281951753939561,0,0,0,0,0.240724100067505,0,0,0,0.315543124386369,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,1.14028650910293,0.305966489225945,0,0.0918948995348449,0.250707539292375,0.0757786982182394,0.267964130156178,0,0,0,0.23806443146374,2.58355639344024,1.61394257169231,0,0,0.404234377916439,0,0.342233301085281,0.740872583160463,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0,0.805095174364105,0.641136984606466|short_description=p2@LINC00176}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=27655 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-240bp_to_ENST00000463337_5end | |||
|coexpression_cluster_id=C4064 | |||
|description=CAGE_peak_2_at_LINC00176_5end | |||
|id=chr20:62669224..62669244,+ | |||
|ontology_enrichment_celltype=CL:0002139!8.51e-20!24;CL:0000115!2.65e-16!35;CL:0000071!1.48e-15!18;CL:0002546!1.48e-15!18;CL:0002078!4.92e-15!44;CL:0002543!3.05e-09!6;CL:0000213!8.15e-09!57;CL:0000215!8.15e-09!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.17e-27;24!CL:0000071;4.89e-24;18!CL:0000115;3.68e-20;36!CL:0002543;1.46e-19;6!CL:0002078;1.18e-11;45!CL:0002144;9.10e-11;3!CL:0002618;1.63e-10;3!CL:0000213;8.92e-10;58!CL:0000215;8.92e-10;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,9.58e-28,24;CL:0000115,1.27e-25,36;CL:0000071,4.97e-24,18;CL:0002546,4.97e-24,18;CL:0002543,9.51e-20,6;CL:0002078,1.40e-19,45;CL:0000213,3.46e-14,58;CL:0000215,3.46e-14,58;CL:0002144,1.04e-10,3;CL:0002618,1.23e-10,3;CL:0000838,3.25e-07,52;CL:0000542,4.97e-07,53;CL:0000051,4.97e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002546;4.89e-24;18!UBERON:0006215;8.95e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.48e-15!18;UBERON:0004638!1.48e-15!18;UBERON:0004852!1.48e-15!18;UBERON:0000487!2.01e-13!22;UBERON:0006914!1.11e-12!25;UBERON:0001638!1.26e-07!9;UBERON:0003920!1.26e-07!9;UBERON:0004582!1.26e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.89e-24;18!UBERON:0001986;4.89e-24;18!UBERON:0004852;4.89e-24;18!UBERON:0000487;3.60e-19;22!UBERON:0006914;1.52e-16;25!UBERON:0001638;7.99e-13;9!UBERON:0003920;7.99e-13;9!UBERON:0004582;7.99e-13;9!UBERON:0000490;8.34e-11;33!UBERON:0010523;9.10e-11;3!UBERON:0001915;9.10e-11;3!UBERON:0001982;9.10e-11;3!UBERON:0002370;1.79e-07;2!UBERON:0005058;1.79e-07;2!UBERON:0009113;1.79e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,4.97e-24,18;UBERON:0001986,4.97e-24,18;UBERON:0004852,4.97e-24,18;UBERON:0000487,3.65e-19,22;UBERON:0006914,1.53e-16,25;UBERON:0001638,6.06e-13,9;UBERON:0003920,6.06e-13,9;UBERON:0004582,6.06e-13,9;UBERON:0010523,1.04e-10,3;UBERON:0001915,1.04e-10,3;UBERON:0001982,1.04e-10,3;UBERON:0000055,9.74e-09,68;UBERON:0002049,3.61e-07,78;UBERON:0007798,3.61e-07,78 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,7.18286014030742,4.92603536699674,5.35233312933019,0,0,0.154816123316076,0,0,0,0,0,0,1.10799081706375,0,1.08505435357926,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,6.09800287352883,0,4.31763147898969,0.167186495390678,0,2.36723902867367,0,0.557052284425868,0.294605907474837,1.77227115666897,1.35401931882508,1.15282187753108,1.56071217071854,1.80881695064044,2.21080014228679,1.44901542867526,0,3.21048993707656,2.09071047609954,0.113309342697566,0,4.12352934579156,0.759059076058509,0,0,0,0,0.127986611154418,0,0,0,1.41124720257313,0,5.79297615531196,0,0,0.383587685530591,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,2.42998351125316,1.13061588384802,0,0.825354125820202,0.417989933073621,1.8089173141853,2.49036383880697,4.35136796594071,2.01414658554573,1.52054421143703,5.6134273236079,0,2.43042584364528,2.94689103337463,2.2452937262617,1.68917220724983,1.53316637465883,3.79706263827252,3.48083313467774,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,0.215627574859517,1.41177339907723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0.680374821106063,1.51141141271498,6.16909010761157,0.270946437543853,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.91547074219827,0,0,0,0,0,0,0,0.988823245360557,0,0.19924798825107,0,0.503865495708552,0,22.7706890102979,0,0,0,0,0,0,0,0,0,0,0.520855522170466,9.09583999960435,0,0.1137934482855,0.254253650292766,1.65471377237555,0.344743373241465,0,0,0,0,3.05163472634166,1.99042667876204,3.54657142744257,0.219385397153973,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0.611030144933625,5.04085918757057,10.3793708715062,13.5748534357092,0,0.802577647298789,0,0,0.19566461893209,0,0.394584402849391,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.859930162358083,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,2.73771935828724,0.0801588202515337,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,35.2269054734281,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,2.97699613087171,0,0,0,0.544017803369474,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,9.19942020932677,0,0,0,0,0,0,0,0.323474434190045,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0.183428598521679,0,0,0,0,0.225630985047772,0,0,0,0,1.03499260351932,0,0,0,0,0.546974809018219,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0.0679697329768317,0,0.118193840883968,0.222462803784138,0.078493092850514,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.447421727191169,0,0,0,0,1.1598144313382,0,0.701818390386317,15.120258912264,0,0,0,1.81155412280008,0.771741581079447,0,0,0,0.471353094203252,0,0,0,0,0.281951753939561,0,0,0,0,0.240724100067505,0,0,0,0.315543124386369,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,1.14028650910293,0.305966489225945,0,0.0918948995348449,0.250707539292375,0.0757786982182394,0.267964130156178,0,0,0,0.23806443146374,2.58355639344024,1.61394257169231,0,0,0.404234377916439,0,0.342233301085281,0.740872583160463,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0,0.805095174364105,0.641136984606466 | |||
|short_description=p2@LINC00176 | |||
}} |
Revision as of 09:40, 12 September 2013
Short description: | p2@LINC00176 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LINC00176_5end |
Coexpression cluster: | C4064_hairy_b_small_cord_breast_adult_mycosis |
Association with transcript: | -240bp_to_ENST00000463337_5end |
EntrezGene: | NA |
HGNC: | 27655 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 9.58e-28 | 24 |
endothelial cell | 1.27e-25 | 36 |
blood vessel endothelial cell | 4.97e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.97e-24 | 18 |
vein endothelial cell | 9.51e-20 | 6 |
meso-epithelial cell | 1.40e-19 | 45 |
lining cell | 3.46e-14 | 58 |
barrier cell | 3.46e-14 | 58 |
capillary endothelial cell | 1.04e-10 | 3 |
endothelial cell of umbilical vein | 1.23e-10 | 3 |
lymphoid lineage restricted progenitor cell | 3.25e-07 | 52 |
lymphocyte | 4.97e-07 | 53 |
common lymphoid progenitor | 4.97e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 4.97e-24 | 18 |
endothelium | 4.97e-24 | 18 |
cardiovascular system endothelium | 4.97e-24 | 18 |
simple squamous epithelium | 3.65e-19 | 22 |
squamous epithelium | 1.53e-16 | 25 |
vein | 6.06e-13 | 9 |
venous blood vessel | 6.06e-13 | 9 |
venous system | 6.06e-13 | 9 |
microcirculatory vessel | 1.04e-10 | 3 |
endothelium of capillary | 1.04e-10 | 3 |
capillary | 1.04e-10 | 3 |
vessel | 9.74e-09 | 68 |
vasculature | 3.61e-07 | 78 |
vascular system | 3.61e-07 | 78 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.