FFCP PHASE1:Hg19::chr21:20741243..20741260,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C156|description=CAGE_peak_at_chr21:20741243..20741260,-|id=chr21:20741243..20741260,-|ontology_enrichment_celltype=CL:0000080!6.29e-25!6;CL:0000838!6.05e-20!52;CL:0000542!1.47e-19!53;CL:0000051!1.47e-19!53;CL:0000946!2.66e-18!1;CL:0000786!2.66e-18!1;CL:0000980!2.66e-18!1;CL:0000945!2.07e-17!24;CL:0000826!2.07e-17!24;CL:0000988!4.50e-10!182;CL:0000785!7.98e-10!2;CL:0000955!7.98e-10!2;CL:0000818!7.98e-10!2;CL:0000954!7.98e-10!2;CL:0000816!7.98e-10!2;CL:0002087!2.55e-08!119;CL:0002031!5.84e-08!124;CL:0000738!5.58e-07!140;CL:0000817!5.80e-07!3|ontology_enrichment_celltype_v019=CL:0000946;2.16e-26;1!CL:0000786;2.16e-26;1!CL:0000945;5.64e-26;24!CL:0000542;3.63e-11;53|ontology_enrichment_celltype_v019_2=CL:0000946,2.16e-26,1;CL:0000786,2.16e-26,1;CL:0000980,2.16e-26,1;CL:0000945,6.42e-26,24;CL:0000826,6.42e-26,24;CL:0000838,2.46e-23,52;CL:0000542,6.72e-23,53;CL:0000051,6.72e-23,53;CL:0000785,6.43e-14,2;CL:0000955,6.43e-14,2;CL:0000818,6.43e-14,2;CL:0000954,6.43e-14,2;CL:0000816,6.43e-14,2;CL:0002087,1.71e-10,115;CL:0002031,4.65e-10,120;CL:0000817,1.01e-09,3;CL:0000738,7.06e-09,136;CL:0002032,1.72e-07,161;CL:0000837,1.72e-07,161;CL:0000037,3.55e-07,168;CL:0000988,8.33e-07,177|ontology_enrichment_development_v019=CL:0000954;6.43e-14;2!CL:0000051;3.63e-11;53|ontology_enrichment_disease=DOID:4960!8.72e-18!1;DOID:0070004!8.72e-18!1;DOID:0060060!1.03e-17!1;DOID:0060061!1.03e-17!1;DOID:8691!1.03e-17!1;DOID:0060058!1.43e-15!10;DOID:2531!3.39e-08!51;DOID:0060083!3.39e-08!51|ontology_enrichment_disease_v019=DOID:4960;1.26e-25;1!DOID:0070004;1.26e-25;1!DOID:0060058;6.94e-11;10|ontology_enrichment_disease_v019_2=DOID:4960,1.26e-25,1;DOID:0070004,1.26e-25,1;DOID:0060058,6.61e-11,10;DOID:2531,3.33e-08,51;DOID:0060083,3.33e-08,51|ontology_enrichment_uberon=UBERON:0002331!2.99e-15!10;UBERON:0000358!2.99e-15!10;UBERON:0000307!2.99e-15!10;UBERON:0000091!2.99e-15!10;UBERON:0000087!2.99e-15!10;UBERON:0007806!2.99e-15!10;UBERON:0008780!2.99e-15!10;UBERON:0005728!2.99e-15!10;UBERON:0000178!2.21e-10!15;UBERON:0000179!2.21e-10!15;UBERON:0000463!2.21e-10!15;UBERON:0002106!7.70e-07!3;UBERON:0004854!7.70e-07!3;UBERON:0009034!7.70e-07!3;UBERON:0002095!7.70e-07!3;UBERON:0004782!7.70e-07!3;UBERON:0003281!7.70e-07!3;UBERON:0009664!7.70e-07!3;UBERON:0002296!7.70e-07!3;UBERON:0005602!7.70e-07!3;UBERON:0001179!7.70e-07!3;UBERON:0006293!7.70e-07!3|ontology_enrichment_uberon_v019=UBERON:0002106;1.60e-09;3|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.54e-09,3;UBERON:0004854,1.54e-09,3;UBERON:0009034,1.54e-09,3;UBERON:0002095,1.54e-09,3;UBERON:0004782,1.54e-09,3;UBERON:0003281,1.54e-09,3;UBERON:0009664,1.54e-09,3;UBERON:0002296,1.54e-09,3;UBERON:0005602,1.54e-09,3;UBERON:0001179,1.54e-09,3;UBERON:0006293,1.54e-09,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20936304141395,2.46301768349837,3.46327437780189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67763168115679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.247127877893006,0.417687798021821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94331031418972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79994958341972,0,1.03328987796489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2519085689146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89829352182294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr21:20741243..20741260,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C156 | |||
|description=CAGE_peak_at_chr21:20741243..20741260,- | |||
|id=chr21:20741243..20741260,- | |||
|ontology_enrichment_celltype=CL:0000080!6.29e-25!6;CL:0000838!6.05e-20!52;CL:0000542!1.47e-19!53;CL:0000051!1.47e-19!53;CL:0000946!2.66e-18!1;CL:0000786!2.66e-18!1;CL:0000980!2.66e-18!1;CL:0000945!2.07e-17!24;CL:0000826!2.07e-17!24;CL:0000988!4.50e-10!182;CL:0000785!7.98e-10!2;CL:0000955!7.98e-10!2;CL:0000818!7.98e-10!2;CL:0000954!7.98e-10!2;CL:0000816!7.98e-10!2;CL:0002087!2.55e-08!119;CL:0002031!5.84e-08!124;CL:0000738!5.58e-07!140;CL:0000817!5.80e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000946;2.16e-26;1!CL:0000786;2.16e-26;1!CL:0000945;5.64e-26;24!CL:0000542;3.63e-11;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,2.16e-26,1;CL:0000786,2.16e-26,1;CL:0000980,2.16e-26,1;CL:0000945,6.42e-26,24;CL:0000826,6.42e-26,24;CL:0000838,2.46e-23,52;CL:0000542,6.72e-23,53;CL:0000051,6.72e-23,53;CL:0000785,6.43e-14,2;CL:0000955,6.43e-14,2;CL:0000818,6.43e-14,2;CL:0000954,6.43e-14,2;CL:0000816,6.43e-14,2;CL:0002087,1.71e-10,115;CL:0002031,4.65e-10,120;CL:0000817,1.01e-09,3;CL:0000738,7.06e-09,136;CL:0002032,1.72e-07,161;CL:0000837,1.72e-07,161;CL:0000037,3.55e-07,168;CL:0000988,8.33e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000954;6.43e-14;2!CL:0000051;3.63e-11;53 | |||
|ontology_enrichment_disease=DOID:4960!8.72e-18!1;DOID:0070004!8.72e-18!1;DOID:0060060!1.03e-17!1;DOID:0060061!1.03e-17!1;DOID:8691!1.03e-17!1;DOID:0060058!1.43e-15!10;DOID:2531!3.39e-08!51;DOID:0060083!3.39e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:4960;1.26e-25;1!DOID:0070004;1.26e-25;1!DOID:0060058;6.94e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.26e-25,1;DOID:0070004,1.26e-25,1;DOID:0060058,6.61e-11,10;DOID:2531,3.33e-08,51;DOID:0060083,3.33e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002331!2.99e-15!10;UBERON:0000358!2.99e-15!10;UBERON:0000307!2.99e-15!10;UBERON:0000091!2.99e-15!10;UBERON:0000087!2.99e-15!10;UBERON:0007806!2.99e-15!10;UBERON:0008780!2.99e-15!10;UBERON:0005728!2.99e-15!10;UBERON:0000178!2.21e-10!15;UBERON:0000179!2.21e-10!15;UBERON:0000463!2.21e-10!15;UBERON:0002106!7.70e-07!3;UBERON:0004854!7.70e-07!3;UBERON:0009034!7.70e-07!3;UBERON:0002095!7.70e-07!3;UBERON:0004782!7.70e-07!3;UBERON:0003281!7.70e-07!3;UBERON:0009664!7.70e-07!3;UBERON:0002296!7.70e-07!3;UBERON:0005602!7.70e-07!3;UBERON:0001179!7.70e-07!3;UBERON:0006293!7.70e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.60e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.54e-09,3;UBERON:0004854,1.54e-09,3;UBERON:0009034,1.54e-09,3;UBERON:0002095,1.54e-09,3;UBERON:0004782,1.54e-09,3;UBERON:0003281,1.54e-09,3;UBERON:0009664,1.54e-09,3;UBERON:0002296,1.54e-09,3;UBERON:0005602,1.54e-09,3;UBERON:0001179,1.54e-09,3;UBERON:0006293,1.54e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20936304141395,2.46301768349837,3.46327437780189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67763168115679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.247127877893006,0.417687798021821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94331031418972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79994958341972,0,1.03328987796489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2519085689146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89829352182294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr21:20741243..20741260,- | |||
}} |
Revision as of 09:53, 12 September 2013
Short description: | p@chr21:20741243..20741260, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr21:20741243..20741260, - |
Coexpression cluster: | C156_plasma_splenic_hereditary_B_large_xeroderma_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 2.16e-26 | 1 |
plasma cell | 2.16e-26 | 1 |
plasmablast | 2.16e-26 | 1 |
lymphocyte of B lineage | 6.42e-26 | 24 |
pro-B cell | 6.42e-26 | 24 |
lymphoid lineage restricted progenitor cell | 2.46e-23 | 52 |
lymphocyte | 6.72e-23 | 53 |
common lymphoid progenitor | 6.72e-23 | 53 |
mature B cell | 6.43e-14 | 2 |
pre-B-II cell | 6.43e-14 | 2 |
transitional stage B cell | 6.43e-14 | 2 |
small pre-B-II cell | 6.43e-14 | 2 |
immature B cell | 6.43e-14 | 2 |
nongranular leukocyte | 1.71e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 4.65e-10 | 120 |
precursor B cell | 1.01e-09 | 3 |
leukocyte | 7.06e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.72e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.72e-07 | 161 |
hematopoietic stem cell | 3.55e-07 | 168 |
hematopoietic cell | 8.33e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.54e-09 | 3 |
gastrointestinal system mesentery | 1.54e-09 | 3 |
stomach region | 1.54e-09 | 3 |
mesentery | 1.54e-09 | 3 |
gastrointestinal system serosa | 1.54e-09 | 3 |
mesentery of stomach | 1.54e-09 | 3 |
gut mesentery | 1.54e-09 | 3 |
dorsal mesentery | 1.54e-09 | 3 |
dorsal mesogastrium | 1.54e-09 | 3 |
peritoneal cavity | 1.54e-09 | 3 |
spleen primordium | 1.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.26e-25 | 1 |
myeloma | 1.26e-25 | 1 |
lymphoma | 6.61e-11 | 10 |
hematologic cancer | 3.33e-08 | 51 |
immune system cancer | 3.33e-08 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.