FFCP PHASE1:Hg19::chr21:38071462..38071474,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6493|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10883|TSSclassifier=S|UniProt=Q14190|association_with_transcript=28bp_to_ENST00000290399,ENST00000481185_5end|coexpression_cluster_id=C2630|description=CAGE_peak_3_at_SIM2_5end|id=chr21:38071462..38071474,+|ontology_enrichment_celltype=CL:0000066!1.28e-17!254|ontology_enrichment_celltype_v019=CL:0002178;1.07e-09;3!CL:0002539;2.94e-08;10|ontology_enrichment_celltype_v019_2=CL:0002178,1.11e-09,3;CL:0000066,1.12e-08,253;CL:0002539,3.02e-08,10|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050687!6.62e-35!143;DOID:305!2.85e-33!106;DOID:162!1.81e-26!235;DOID:14566!3.68e-25!239;DOID:299!1.18e-11!25;DOID:3119!1.17e-07!14|ontology_enrichment_disease_v019=DOID:3119;9.48e-13;14|ontology_enrichment_disease_v019_2=DOID:3119,7.12e-13,14;DOID:0050687,2.43e-12,143;DOID:162,1.91e-11,235;DOID:305,2.63e-11,106;DOID:14566,5.24e-11,239|ontology_enrichment_uberon=UBERON:0003104!1.19e-14!238;UBERON:0009142!1.19e-14!238;UBERON:0000481!3.57e-10!347;UBERON:0001737!7.44e-09!9;UBERON:0001007!9.19e-09!155;UBERON:0001555!9.19e-09!155;UBERON:0007026!9.19e-09!155;UBERON:0002100!1.27e-08!216;UBERON:0004921!2.84e-08!129;UBERON:0004185!2.84e-08!129;UBERON:0000077!2.99e-08!130;UBERON:0000344!8.53e-08!12;UBERON:0001041!1.89e-07!98;UBERON:0005177!2.05e-07!107;UBERON:0008947!2.73e-07!38;UBERON:0003258!2.73e-07!38;UBERON:0004119!3.53e-07!169;UBERON:0000925!3.53e-07!169;UBERON:0006595!3.53e-07!169;UBERON:0003064!6.68e-07!37|ontology_enrichment_uberon_v019=UBERON:0000945;3.84e-15;5!UBERON:0010039;3.84e-15;5!UBERON:0004237;2.94e-08;10!UBERON:0004695;2.94e-08;10!UBERON:0002111;2.94e-08;10!UBERON:0004178;2.94e-08;10!UBERON:0001041;3.44e-07;14|ontology_enrichment_uberon_v019_2=UBERON:0000945,3.16e-09,8;UBERON:0010039,3.16e-09,8;UBERON:0004237,3.02e-08,10;UBERON:0004695,3.02e-08,10;UBERON:0002111,3.02e-08,10;UBERON:0004178,3.02e-08,10|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0.866364470720326,0.662794751455832,4.03395087871065,4.82155622419182,5.11217063271161,6.8310591830671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0.486634870302636,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,1.77282716330412,0.264818361626438,0,0,0,9.60740961567345,2.22000793575444,0,0,0,0,0,0,0,0,0,0,0.485618833104395,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0.169560592310488,0,0,1.43402297694502,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.709840800239063,1.34867752062481,1.68707720918437,1.32352767278873,0.871517776369625,1.42362371466658,0.943819157121151,0.98110732562673,0.38474715694639,0,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0,0.648119116109707,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0.802025881213139,1.93370076765382,0,0,0,0.902399225814824,0.308061348417659,1.56869953835371,1.46139224653261,0.844413031143006,0,0,0,0,0,0.501689773854853,2.03901018436031,0,3.1342465661105,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,2.12922412126809,0,0.74129687641568,0.572499546967965,0,0,0,0,0,0,0.78494864019923,0,0,0.117812402345686,2.02182481573316,0,0.842516912477962,0,6.33655073041339,0,0,0,0,0,0,0.876901770507525,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0.980160863924127,0,0,0,0,0,0,0,0.649243880549111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30423242938906,0,0.242721043499027,0,0,0,0,0,0,0.140669416410513,0,0,1.05562704063997,0,0,0,0.715880777515084,0,0,0.539210106883961,1.25314822272926,0,0,0,0,0,0,0,2.08342208868187,0,0,0,0,0.945550727071745,0,0,0.868124974666461,0,0,0,0,0,0.219385397153973,0.653630781113941,0,0.230850775511391,0.341826167541004,0,0.897576444097721,0.651884231532048,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,1.14262965711403,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0.782658475728359,0.242780379534093,0,0,0,0,0.60129367765797,1.86638744515045,0.664653872707185,0.992975867626496,0.627865836814451,0,1.13843818411917,0,0,0.587954384486266,0.957651272384428,0.17472666824203,0.171986032471617,0.967563312890852,1.75414361006845,0.739039113478883,1.26085721434945,20.8284458991941,0,0.137041924646751,1.19228767021794,0,1.17330829640882,0.160317640503067,0,2.39771531498556,1.44090417154106,1.03082936549324,1.88754497648161,0.14405479798815,1.61528296235062,0,0,0,0.713987523454252,0.866851769704557,0,0.273810757783986,0,0.859530882839914,0,0,0,0,0,0,0,0,2.52209918479682,0,0,0.0824158583811665,0,0.78741985211799,0,0,0.272406812223151,0,0,0,0,0,0,0,0.551639951094387,1.94081976099493,0.211200673038813,1.07572403599707,1.34340638123612,0,0,0,0,0,0,3.59190574687462,0,0,0.679872549120754,0,0,0,0,0.171086837884329,0,0,0.157204305099666,0,0,0,0,1.91502377331055,0,0,0,0,0.628216385000937,0,0,0,0,0,0,0,0.874862855734746,0,0,2.58792401667989,0,0,0,0.233713309847224,0,0,0,0,0,0,0.310874401165561,0.443565449968902,0,0,0.310525913752519,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0.963099152036517,0.643324774124777,3.39292579554775,2.04035332961045,0.694567422971502,1.71315693154527,0.537266523244462,1.54400723580486,5.92066933862509,0.176689145945881,0.192914038270915,0,0,0,0.911579868532147,0.138258436151731,0,0,0,0.655219697692825,0.737318726261158,2.3244333569449,0,0,0,1.13503190713367,0,0,0,0,0.215649622793364,0,0,0,1.06287460050841,0.123935764259002,0,1.59002175326709,0,0,0.352675943690684,0.6124909547064,0,0,0,0,0,0.0691572524642179,0,0,0.196295437002051,0.589848616738702,0.183428598521679,0.924205329202706,0.381382095467167,0.690359926060101,0.795664888465099,0,0,0,0,0.982631505060581,0.147856086217045,0.0675375846183947,0,0,0.0634158101939068,0,0,0.992422356778588,2.11045493231545,0,0,0,0,0.227662191351298,0,0,0,0,0,0.118193840883968,5.67280149649553,0.941917114206168,0.157115589916002,1.96190514319652,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0.68732060563215,0,0.955538938977433,0.447421727191169,1.17780280338292,0.975343399858155,1.29485767437579,1.12929087541872,1.1598144313382,0,0,8.1569817816161,0.475680363110274,3.61427462524672,0,0.301925687133347,0,0,0.470317296361523,0,0.235676547101626,0,0,0,0.169927114687817,0,0,0,0,0,0.320965466756673,2.92134555298607,0,0.143339583151451,2.20880187070458,0,0,0,0,0,0,0.504665699340316,0,0,0.713921808193872,0.534434810531121,0.643264296743914,0,0,0,0,0.103432995861895,1.0661699095049,0.714193294391221,0,0,0,0,0.404234377916439,0.870866991587845,0,0.942928742204225,0.286888821570705,0.332660356546013,1.87227517805241,0.853818767021724,0,0.359300808426348,0,0,0,0,0,0|short_description=p3@SIM2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6493 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10883 | |||
|TSSclassifier=S | |||
|UniProt=Q14190 | |||
|association_with_transcript=28bp_to_ENST00000290399,ENST00000481185_5end | |||
|coexpression_cluster_id=C2630 | |||
|description=CAGE_peak_3_at_SIM2_5end | |||
|id=chr21:38071462..38071474,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.28e-17!254 | |||
|ontology_enrichment_celltype_v019=CL:0002178;1.07e-09;3!CL:0002539;2.94e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.11e-09,3;CL:0000066,1.12e-08,253;CL:0002539,3.02e-08,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!6.62e-35!143;DOID:305!2.85e-33!106;DOID:162!1.81e-26!235;DOID:14566!3.68e-25!239;DOID:299!1.18e-11!25;DOID:3119!1.17e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3119;9.48e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,7.12e-13,14;DOID:0050687,2.43e-12,143;DOID:162,1.91e-11,235;DOID:305,2.63e-11,106;DOID:14566,5.24e-11,239 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.19e-14!238;UBERON:0009142!1.19e-14!238;UBERON:0000481!3.57e-10!347;UBERON:0001737!7.44e-09!9;UBERON:0001007!9.19e-09!155;UBERON:0001555!9.19e-09!155;UBERON:0007026!9.19e-09!155;UBERON:0002100!1.27e-08!216;UBERON:0004921!2.84e-08!129;UBERON:0004185!2.84e-08!129;UBERON:0000077!2.99e-08!130;UBERON:0000344!8.53e-08!12;UBERON:0001041!1.89e-07!98;UBERON:0005177!2.05e-07!107;UBERON:0008947!2.73e-07!38;UBERON:0003258!2.73e-07!38;UBERON:0004119!3.53e-07!169;UBERON:0000925!3.53e-07!169;UBERON:0006595!3.53e-07!169;UBERON:0003064!6.68e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;3.84e-15;5!UBERON:0010039;3.84e-15;5!UBERON:0004237;2.94e-08;10!UBERON:0004695;2.94e-08;10!UBERON:0002111;2.94e-08;10!UBERON:0004178;2.94e-08;10!UBERON:0001041;3.44e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,3.16e-09,8;UBERON:0010039,3.16e-09,8;UBERON:0004237,3.02e-08,10;UBERON:0004695,3.02e-08,10;UBERON:0002111,3.02e-08,10;UBERON:0004178,3.02e-08,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0.866364470720326,0.662794751455832,4.03395087871065,4.82155622419182,5.11217063271161,6.8310591830671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0.486634870302636,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,1.77282716330412,0.264818361626438,0,0,0,9.60740961567345,2.22000793575444,0,0,0,0,0,0,0,0,0,0,0.485618833104395,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0.169560592310488,0,0,1.43402297694502,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.709840800239063,1.34867752062481,1.68707720918437,1.32352767278873,0.871517776369625,1.42362371466658,0.943819157121151,0.98110732562673,0.38474715694639,0,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0,0.648119116109707,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0.802025881213139,1.93370076765382,0,0,0,0.902399225814824,0.308061348417659,1.56869953835371,1.46139224653261,0.844413031143006,0,0,0,0,0,0.501689773854853,2.03901018436031,0,3.1342465661105,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,2.12922412126809,0,0.74129687641568,0.572499546967965,0,0,0,0,0,0,0.78494864019923,0,0,0.117812402345686,2.02182481573316,0,0.842516912477962,0,6.33655073041339,0,0,0,0,0,0,0.876901770507525,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0.980160863924127,0,0,0,0,0,0,0,0.649243880549111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30423242938906,0,0.242721043499027,0,0,0,0,0,0,0.140669416410513,0,0,1.05562704063997,0,0,0,0.715880777515084,0,0,0.539210106883961,1.25314822272926,0,0,0,0,0,0,0,2.08342208868187,0,0,0,0,0.945550727071745,0,0,0.868124974666461,0,0,0,0,0,0.219385397153973,0.653630781113941,0,0.230850775511391,0.341826167541004,0,0.897576444097721,0.651884231532048,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,1.14262965711403,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0.782658475728359,0.242780379534093,0,0,0,0,0.60129367765797,1.86638744515045,0.664653872707185,0.992975867626496,0.627865836814451,0,1.13843818411917,0,0,0.587954384486266,0.957651272384428,0.17472666824203,0.171986032471617,0.967563312890852,1.75414361006845,0.739039113478883,1.26085721434945,20.8284458991941,0,0.137041924646751,1.19228767021794,0,1.17330829640882,0.160317640503067,0,2.39771531498556,1.44090417154106,1.03082936549324,1.88754497648161,0.14405479798815,1.61528296235062,0,0,0,0.713987523454252,0.866851769704557,0,0.273810757783986,0,0.859530882839914,0,0,0,0,0,0,0,0,2.52209918479682,0,0,0.0824158583811665,0,0.78741985211799,0,0,0.272406812223151,0,0,0,0,0,0,0,0.551639951094387,1.94081976099493,0.211200673038813,1.07572403599707,1.34340638123612,0,0,0,0,0,0,3.59190574687462,0,0,0.679872549120754,0,0,0,0,0.171086837884329,0,0,0.157204305099666,0,0,0,0,1.91502377331055,0,0,0,0,0.628216385000937,0,0,0,0,0,0,0,0.874862855734746,0,0,2.58792401667989,0,0,0,0.233713309847224,0,0,0,0,0,0,0.310874401165561,0.443565449968902,0,0,0.310525913752519,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0.963099152036517,0.643324774124777,3.39292579554775,2.04035332961045,0.694567422971502,1.71315693154527,0.537266523244462,1.54400723580486,5.92066933862509,0.176689145945881,0.192914038270915,0,0,0,0.911579868532147,0.138258436151731,0,0,0,0.655219697692825,0.737318726261158,2.3244333569449,0,0,0,1.13503190713367,0,0,0,0,0.215649622793364,0,0,0,1.06287460050841,0.123935764259002,0,1.59002175326709,0,0,0.352675943690684,0.6124909547064,0,0,0,0,0,0.0691572524642179,0,0,0.196295437002051,0.589848616738702,0.183428598521679,0.924205329202706,0.381382095467167,0.690359926060101,0.795664888465099,0,0,0,0,0.982631505060581,0.147856086217045,0.0675375846183947,0,0,0.0634158101939068,0,0,0.992422356778588,2.11045493231545,0,0,0,0,0.227662191351298,0,0,0,0,0,0.118193840883968,5.67280149649553,0.941917114206168,0.157115589916002,1.96190514319652,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0.68732060563215,0,0.955538938977433,0.447421727191169,1.17780280338292,0.975343399858155,1.29485767437579,1.12929087541872,1.1598144313382,0,0,8.1569817816161,0.475680363110274,3.61427462524672,0,0.301925687133347,0,0,0.470317296361523,0,0.235676547101626,0,0,0,0.169927114687817,0,0,0,0,0,0.320965466756673,2.92134555298607,0,0.143339583151451,2.20880187070458,0,0,0,0,0,0,0.504665699340316,0,0,0.713921808193872,0.534434810531121,0.643264296743914,0,0,0,0,0.103432995861895,1.0661699095049,0.714193294391221,0,0,0,0,0.404234377916439,0.870866991587845,0,0.942928742204225,0.286888821570705,0.332660356546013,1.87227517805241,0.853818767021724,0,0.359300808426348,0,0,0,0,0,0 | |||
|short_description=p3@SIM2 | |||
}} |
Revision as of 10:17, 12 September 2013
Short description: | p3@SIM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SIM2_5end |
Coexpression cluster: | C2630_extraskeletal_Fibroblast_Smooth_Aortic_mesothelioma_prostate_small |
Association with transcript: | 28bp_to_ENST00000290399, ENST00000481185_5end |
EntrezGene: | SIM2 |
HGNC: | 10883 |
UniProt: | Q14190 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.11e-09 | 3 |
epithelial cell | 1.12e-08 | 253 |
aortic smooth muscle cell | 3.02e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
stomach | 3.16e-09 | 8 |
food storage organ | 3.16e-09 | 8 |
blood vessel smooth muscle | 3.02e-08 | 10 |
arterial system smooth muscle | 3.02e-08 | 10 |
artery smooth muscle tissue | 3.02e-08 | 10 |
aorta smooth muscle tissue | 3.02e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 7.12e-13 | 14 |
cell type cancer | 2.43e-12 | 143 |
cancer | 1.91e-11 | 235 |
carcinoma | 2.63e-11 | 106 |
disease of cellular proliferation | 5.24e-11 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.