FFCP PHASE1:Hg19::chr22:31003133..31003138,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6948|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11653|TSSclassifier=S|UniProt=B5MBX2|association_with_transcript=0bp_to_ENST00000405742_5end|coexpression_cluster_id=C67|description=CAGE_peak_10_at_TCN2_5end|id=chr22:31003133..31003138,+|ontology_enrichment_celltype=CL:0000115!2.09e-07!35;CL:0002139!5.04e-07!24|ontology_enrichment_celltype_v019=CL:0002619;3.58e-15;3!CL:0002575;1.15e-10;2!CL:0002549;1.83e-10;2!CL:0000064;6.64e-07;3!CL:0000067;6.64e-07;3!CL:0005012;6.64e-07;3!CL:0002304;6.64e-07;3!CL:0002603;6.64e-07;3|ontology_enrichment_celltype_v019_2=CL:0002619,3.53e-15,3;CL:0002575,1.16e-10,2;CL:0002549,2.12e-10,2;CL:0000064,6.76e-07,3;CL:0000067,6.76e-07,3;CL:0005012,6.76e-07,3;CL:0002304,6.76e-07,3;CL:0000115,8.80e-07,36;CL:0002603,9.89e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!3.55e-09!659;UBERON:0002049!5.40e-08!79;UBERON:0007798!5.40e-08!79;UBERON:0002200!5.44e-08!11;UBERON:0006876!5.44e-08!11;UBERON:0007023!7.40e-08!115;UBERON:0000467!1.93e-07!625;UBERON:0000480!2.44e-07!626;UBERON:0005743!4.36e-07!86;UBERON:0000073!4.67e-07!94;UBERON:0001016!4.67e-07!94;UBERON:0001017!7.24e-07!82|ontology_enrichment_uberon_v019=UBERON:0005629;1.83e-10;2!UBERON:0005358;1.83e-10;2!UBERON:0001886;1.83e-10;2!UBERON:0004086;1.83e-10;2!UBERON:0005282;1.83e-10;2!UBERON:0005281;1.83e-10;2!UBERON:0006876;2.73e-10;11!UBERON:0005284;4.90e-09;5!UBERON:0001778;6.64e-07;3!UBERON:0001775;6.64e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0005629,2.12e-10,2;UBERON:0005358,2.12e-10,2;UBERON:0001886,2.12e-10,2;UBERON:0004086,2.12e-10,2;UBERON:0005282,2.12e-10,2;UBERON:0005281,2.12e-10,2;UBERON:0006876,2.75e-10,11;UBERON:0005284,4.86e-09,5;UBERON:0001778,6.76e-07,3;UBERON:0001775,6.76e-07,3|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.74259811776028,0.994192127183747,0,0,0,0,2.83178433576612,1.02000345622126,0.626909442956176,0,0.136874425072884,0.251085279189606,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0,0.434021741431704,14.3305903513552,7.77344798445551,10.5605982730016,0.290796477559129,0,0,0,0,0,0.28769239232215,0,0.47296445977717,0.344745680736619,0.645484683583826,0,0.752969358170419,0,0,0.612167784741805,0.320929027076094,0,0.329851300186716,0,0,0.580418477257168,0,0,0.75374599577023,0,0.217188844705117,1.21079900526674,0,0,0,0.212604299965044,0,0,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.661743720148475,1.33037638477538,2.45937399940753,0.458426764241994,0,0,0,0,0,0,0,0,0.596287222100115,0,0.347140501607594,0,1.25849830862972,1.10047216776027,0.626984899610432,0.258416759169329,0.35576626268671,0,0.805658634218294,0.760272105718513,0.24406205754817,0,0,0.446498641420399,0,0.225222960966644,1.53316637465883,1.89853131913626,0.183201743930407,0,0,0,0,0.379891534993739,0.397227542439656,1.14734648299525,0,0,0,0,0,0.269421344139376,0.980771418680752,7.11379909931178,2.30470369792,0.468642863667593,0.312160076830321,0,0.149448680551801,0,0,0,0.408308342509787,0.122834317311768,0.103325781175765,1.18800285728205,0,0.910161361938026,0.718618141816238,0,0,0,0.438977620880838,0.30648779579902,0,0.340296549480063,0,0,0,0,0,0,0.18611685633159,0,0,0.252433774244115,0,0.161646056818812,0,0,0.169560592310488,0.193260853163297,0,0,1.34171076742555,0.530119073285941,0.232387885739037,0.518305275076852,0.756962552626885,1.82488679537915,0,0,1.38134921352481,0,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0.245976877086227,0.686271241194102,0,0,0,0.0925884451585296,0,0,0,1.97081688457631,0.117408694235822,0.288732895522148,0.925971025153221,0.380508304469197,0,0,2.95460407304877,0.234004265139238,0.594524649154913,0,0,0,0,0,0,0,0,0,0.144119953416961,0.25248486685276,0.253991577168676,0.763976851116555,0,3.4214489204541,0.616964956219941,1.20137223137567,0.285826432630578,0.336393253036082,2.61576041299968,0.7333828582095,0.129271715757778,0,0.845302752556,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,2.51128545716063,0,0,0,0,0,0,0,0,0,0,0,1.27047312111232,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,9.39845555821155,8.23544217146054,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0,0.256278298511402,0,0,0,0,0.177561725313127,0,0,0,0.362578348774867,0,0,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0.170093705276516,0,1.54227252690289,0,0.501689773854853,0,0,0,0,0,0,0,0.325378394664303,0.721287081534056,0.27470839445503,0.165018999841176,0,0,0,0,0,0,0,0,0.290033387828457,0,0,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0,2.97726695487734,0.632758849437452,0.38126038784765,0.511795582622668,0,0,0,0,0,0.117812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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6948 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11653 | |||
|TSSclassifier=S | |||
|UniProt=B5MBX2 | |||
|association_with_transcript=0bp_to_ENST00000405742_5end | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_10_at_TCN2_5end | |||
|id=chr22:31003133..31003138,+ | |||
|ontology_enrichment_celltype=CL:0000115!2.09e-07!35;CL:0002139!5.04e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002619;3.58e-15;3!CL:0002575;1.15e-10;2!CL:0002549;1.83e-10;2!CL:0000064;6.64e-07;3!CL:0000067;6.64e-07;3!CL:0005012;6.64e-07;3!CL:0002304;6.64e-07;3!CL:0002603;6.64e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,3.53e-15,3;CL:0002575,1.16e-10,2;CL:0002549,2.12e-10,2;CL:0000064,6.76e-07,3;CL:0000067,6.76e-07,3;CL:0005012,6.76e-07,3;CL:0002304,6.76e-07,3;CL:0000115,8.80e-07,36;CL:0002603,9.89e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.55e-09!659;UBERON:0002049!5.40e-08!79;UBERON:0007798!5.40e-08!79;UBERON:0002200!5.44e-08!11;UBERON:0006876!5.44e-08!11;UBERON:0007023!7.40e-08!115;UBERON:0000467!1.93e-07!625;UBERON:0000480!2.44e-07!626;UBERON:0005743!4.36e-07!86;UBERON:0000073!4.67e-07!94;UBERON:0001016!4.67e-07!94;UBERON:0001017!7.24e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0005629;1.83e-10;2!UBERON:0005358;1.83e-10;2!UBERON:0001886;1.83e-10;2!UBERON:0004086;1.83e-10;2!UBERON:0005282;1.83e-10;2!UBERON:0005281;1.83e-10;2!UBERON:0006876;2.73e-10;11!UBERON:0005284;4.90e-09;5!UBERON:0001778;6.64e-07;3!UBERON:0001775;6.64e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,2.12e-10,2;UBERON:0005358,2.12e-10,2;UBERON:0001886,2.12e-10,2;UBERON:0004086,2.12e-10,2;UBERON:0005282,2.12e-10,2;UBERON:0005281,2.12e-10,2;UBERON:0006876,2.75e-10,11;UBERON:0005284,4.86e-09,5;UBERON:0001778,6.76e-07,3;UBERON:0001775,6.76e-07,3 | |||
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| |||
|short_description=p10@TCN2 | |||
}} |
Revision as of 11:29, 12 September 2013
Short description: | p10@TCN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_TCN2_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 0bp_to_ENST00000405742_5end |
EntrezGene: | TCN2 |
HGNC: | 11653 |
UniProt: | B5MBX2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 3.53e-15 | 3 |
central nervous system pericyte | 1.16e-10 | 2 |
fibroblast of choroid plexus | 2.12e-10 | 2 |
ciliated cell | 6.76e-07 | 3 |
ciliated epithelial cell | 6.76e-07 | 3 |
multi-ciliated epithelial cell | 6.76e-07 | 3 |
non-pigmented ciliary epithelial cell | 6.76e-07 | 3 |
endothelial cell | 8.80e-07 | 36 |
astrocyte of the cerebellum | 9.89e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 2.12e-10 | 2 |
ventricle of nervous system | 2.12e-10 | 2 |
choroid plexus | 2.12e-10 | 2 |
brain ventricle | 2.12e-10 | 2 |
ventricular system of brain | 2.12e-10 | 2 |
ventricular system of central nervous system | 2.12e-10 | 2 |
vasculature of organ | 2.75e-10 | 11 |
brain vasculature | 4.86e-09 | 5 |
ciliary epithelium | 6.76e-07 | 3 |
ciliary body | 6.76e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.