FFCP PHASE1:Hg19::chr3:10068095..10068170,+: Difference between revisions
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{{FFCP | 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29452653578,4.58763333230399,0.641930933513346,0.730336388246517,0.458729283404541,0.573358332605805,12.1484102888752,0.203974470572744,2.18175345170189,2.1161073620616,1.11598505450025,0.462175628631418,0,24.8547856925105,24.038425832013,17.4843931395783,13.8704808449095,10.955913615888,3.21632148371957,20.05660314339,7.95676331291514,11.2544934665595,0,0.620597975171371,2.34557380091079,2.3806443146374,10.269636663925,7.69726457268638,10.3161313574164,0.572824424503484,1.0105859447911,2.61260097476354,1.71116650542641,7.13931761954628,1.29099969706817,1.66330178273007,132.605924567277,17.9301941074562,3.8614456457388,0.179650404213174,0,0.244482888365733,4.47585796147312,0,1.61019034872821,7.37307532297436|short_description=p1@FANCD2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=2177 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3585 | |||
|TSSclassifier=S | |||
|UniProt=Q9BXW9,F8WE37 | |||
|association_with_transcript=0bp_to_ENST00000287647,ENST00000383806,ENST00000383807,ENST00000435522,NM_001018115,NM_033084,uc003buv.2,uc003buw.2,uc003bux.1_5end | |||
|coexpression_cluster_id=C4256 | |||
|description=CAGE_peak_1_at_FANCD2_5end | |||
|id=chr3:10068095..10068170,+ | |||
|ontology_enrichment_celltype=CL:0000012!1.67e-12!682;CL:0000548!1.85e-12!679;CL:0000004!1.85e-12!679;CL:0000255!1.85e-12!679;CL:0000003!3.27e-10!722;CL:0000066!1.14e-09!254;CL:0000945!8.85e-09!24;CL:0000826!8.85e-09!24;CL:0000063!4.10e-08!578;CL:0000542!6.63e-08!53;CL:0000051!6.63e-08!53;CL:0000838!1.80e-07!52;CL:0002319!3.61e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000945;7.39e-09;24!CL:0002319;2.75e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.80e-09,253;CL:0000945,6.06e-09,24;CL:0000826,6.06e-09,24;CL:0000542,1.10e-07,53;CL:0000051,1.10e-07,53;CL:0002319,2.69e-07,25;CL:0000838,2.98e-07,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.18e-48!235;DOID:14566!8.34e-47!239;DOID:0050687!8.47e-26!143;DOID:0050686!1.91e-21!137;DOID:305!3.80e-21!106;DOID:2531!5.98e-20!51;DOID:0060083!5.98e-20!51;DOID:1240!9.98e-16!39;DOID:8692!9.20e-12!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;7.05e-13;39!DOID:2531;1.47e-12;51!DOID:0060083;1.47e-12;51!DOID:8692;7.63e-12;31!DOID:305;2.71e-07;106!DOID:0050687;3.45e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.88e-48,235;DOID:14566,4.12e-47,239;DOID:0050687,1.40e-25,143;DOID:0050686,1.94e-21,137;DOID:305,7.09e-21,106;DOID:2531,1.46e-20,51;DOID:0060083,1.46e-20,51;DOID:1240,3.05e-16,39;DOID:8692,3.53e-12,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@FANCD2 | |||
}} |
Revision as of 20:27, 12 September 2013
Short description: | p1@FANCD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_FANCD2_5end |
Coexpression cluster: | C4256_transitionalcell_embryonic_acute_retinoblastoma_iPS_Hodgkin_chronic |
Association with transcript: | 0bp_to_ENST00000287647, ENST00000383806, ENST00000383807, ENST00000435522, NM_001018115, NM_033084, uc003buv.2, uc003buw.2, uc003bux.1_5end |
EntrezGene: | FANCD2 |
HGNC: | 3585 |
UniProt: | Q9BXW9F8WE37 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.80e-09 | 253 |
lymphocyte of B lineage | 6.06e-09 | 24 |
pro-B cell | 6.06e-09 | 24 |
lymphocyte | 1.10e-07 | 53 |
common lymphoid progenitor | 1.10e-07 | 53 |
neural cell | 2.69e-07 | 25 |
lymphoid lineage restricted progenitor cell | 2.98e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.88e-48 | 235 |
disease of cellular proliferation | 4.12e-47 | 239 |
cell type cancer | 1.40e-25 | 143 |
organ system cancer | 1.94e-21 | 137 |
carcinoma | 7.09e-21 | 106 |
hematologic cancer | 1.46e-20 | 51 |
immune system cancer | 1.46e-20 | 51 |
leukemia | 3.05e-16 | 39 |
myeloid leukemia | 3.53e-12 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.