FFCP PHASE1:Hg19::chr3:50316545..50316554,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=132228|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26781|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_EU832119,EU832213_5end|coexpression_cluster_id=C20|description=CAGE_peak_4_at_C3orf45_5end|id=chr3:50316545..50316554,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0004140;5.05e-34;1!UBERON:0008814;9.07e-18;2!UBERON:0010056;9.07e-18;2|ontology_enrichment_disease=DOID:114!3.21e-14!2;DOID:178!1.04e-07!1;DOID:326!1.04e-07!1;DOID:3978!1.04e-07!1;DOID:3394!1.04e-07!1;DOID:5844!1.04e-07!1;DOID:1287!1.54e-07!4|ontology_enrichment_disease_v019=DOID:114;9.07e-18;2!DOID:1287;1.44e-09;4|ontology_enrichment_disease_v019_2=DOID:114,9.07e-18,2;DOID:1287,1.44e-09,4|ontology_enrichment_uberon=UBERON:0007023!3.11e-25!115;UBERON:0000341!3.92e-14!2;UBERON:0002298!6.63e-13!8;UBERON:0007100!2.68e-11!27;UBERON:0001049!4.01e-11!57;UBERON:0005068!4.01e-11!57;UBERON:0006241!4.01e-11!57;UBERON:0007135!4.01e-11!57;UBERON:0002616!1.09e-10!59;UBERON:0000153!1.20e-10!129;UBERON:0007811!1.20e-10!129;UBERON:0000955!1.73e-10!69;UBERON:0006238!1.73e-10!69;UBERON:0001723!3.84e-10!3;UBERON:0001033!3.84e-10!3;UBERON:0010056!3.84e-10!3;UBERON:0003978!7.15e-10!3;UBERON:0009751!7.15e-10!3;UBERON:0000946!7.15e-10!3;UBERON:0002523!7.15e-10!3;UBERON:0005983!7.15e-10!3;UBERON:0002165!7.15e-10!3;UBERON:0002062!7.15e-10!3;UBERON:0007280!7.15e-10!3;UBERON:0003075!8.34e-10!86;UBERON:0007284!8.34e-10!86;UBERON:0001896!1.57e-09!3;UBERON:0005290!1.57e-09!3;UBERON:0010096!1.57e-09!3;UBERON:0000988!2.62e-09!3;UBERON:0002346!2.87e-09!90;UBERON:0004733!1.18e-08!12;UBERON:0002028!1.18e-08!12;UBERON:0007277!1.18e-08!12;UBERON:0001017!1.57e-08!82;UBERON:0000033!1.77e-08!123;UBERON:0004121!1.89e-08!169;UBERON:0000924!3.53e-08!173;UBERON:0006601!3.53e-08!173;UBERON:0000989!4.07e-08!1;UBERON:0008811!4.07e-08!1;UBERON:0006258!4.07e-08!1;UBERON:0005876!4.07e-08!1;UBERON:0004874!4.07e-08!1;UBERON:0007029!4.35e-08!1;UBERON:0002135!4.66e-08!1;UBERON:0005743!4.79e-08!86;UBERON:0002426!4.99e-08!1;UBERON:0003831!4.99e-08!1;UBERON:0003898!4.99e-08!1;UBERON:0004830!4.99e-08!1;UBERON:0001774!4.99e-08!1;UBERON:0003830!4.99e-08!1;UBERON:0005175!4.99e-08!1;UBERON:0003897!4.99e-08!1;UBERON:0001103!4.99e-08!1;UBERON:0010084!4.99e-08!1;UBERON:0002146!5.33e-08!1;UBERON:0005623!5.33e-08!1;UBERON:0004732!5.37e-08!13;UBERON:0002084!5.70e-08!1;UBERON:0002082!5.70e-08!1;UBERON:0004706!5.70e-08!1;UBERON:0001893!5.75e-08!34;UBERON:0003103!6.71e-08!69;UBERON:0001736!7.45e-08!1;UBERON:0006298!7.45e-08!1;UBERON:0002336!7.97e-08!1;UBERON:0001018!7.97e-08!1;UBERON:0002473!7.97e-08!1;UBERON:0005340!7.97e-08!1;UBERON:0002316!7.97e-08!1;UBERON:0003544!7.97e-08!1;UBERON:0001020!7.97e-08!1;UBERON:0005970!7.97e-08!1;UBERON:0002437!7.97e-08!1;UBERON:0002902!1.44e-07!1;UBERON:0009899!1.44e-07!1;UBERON:0007190!1.64e-07!1;UBERON:0002581!1.75e-07!1;UBERON:0001882!1.87e-07!1;UBERON:0005403!1.87e-07!1;UBERON:0000073!4.20e-07!94;UBERON:0001016!4.20e-07!94;UBERON:0003076!6.07e-07!15;UBERON:0003057!6.07e-07!15|ontology_enrichment_uberon_v019=UBERON:0001723;7.81e-45;3!UBERON:0001033;7.81e-45;3!UBERON:0007100;1.28e-12;25!UBERON:0000020;9.39e-07;23|ontology_enrichment_uberon_v019_2=UBERON:0001723,9.77e-45,3;UBERON:0001033,9.77e-45,3;UBERON:0010056,9.77e-45,3;UBERON:0001042,3.04e-14,10;UBERON:0009145,3.04e-14,10;UBERON:0006562,4.80e-13,11;UBERON:0003103,1.36e-12,68;UBERON:0007100,9.63e-12,27;UBERON:0008814,2.33e-08,18;UBERON:0001557,5.73e-08,19;UBERON:0000166,5.24e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.687481272035051,0,0.199679000498991,1.28767814440971,1.56220020209311,1.07493555978762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33461648913121,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.476128862927481,0,0,0,0,0,1.08858373948481,2.39563310759697,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@C3orf45}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=132228 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26781 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_EU832119,EU832213_5end | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_4_at_C3orf45_5end | |||
|id=chr3:50316545..50316554,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;5.05e-34;1!UBERON:0008814;9.07e-18;2!UBERON:0010056;9.07e-18;2 | |||
|ontology_enrichment_disease=DOID:114!3.21e-14!2;DOID:178!1.04e-07!1;DOID:326!1.04e-07!1;DOID:3978!1.04e-07!1;DOID:3394!1.04e-07!1;DOID:5844!1.04e-07!1;DOID:1287!1.54e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:114;9.07e-18;2!DOID:1287;1.44e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,9.07e-18,2;DOID:1287,1.44e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.11e-25!115;UBERON:0000341!3.92e-14!2;UBERON:0002298!6.63e-13!8;UBERON:0007100!2.68e-11!27;UBERON:0001049!4.01e-11!57;UBERON:0005068!4.01e-11!57;UBERON:0006241!4.01e-11!57;UBERON:0007135!4.01e-11!57;UBERON:0002616!1.09e-10!59;UBERON:0000153!1.20e-10!129;UBERON:0007811!1.20e-10!129;UBERON:0000955!1.73e-10!69;UBERON:0006238!1.73e-10!69;UBERON:0001723!3.84e-10!3;UBERON:0001033!3.84e-10!3;UBERON:0010056!3.84e-10!3;UBERON:0003978!7.15e-10!3;UBERON:0009751!7.15e-10!3;UBERON:0000946!7.15e-10!3;UBERON:0002523!7.15e-10!3;UBERON:0005983!7.15e-10!3;UBERON:0002165!7.15e-10!3;UBERON:0002062!7.15e-10!3;UBERON:0007280!7.15e-10!3;UBERON:0003075!8.34e-10!86;UBERON:0007284!8.34e-10!86;UBERON:0001896!1.57e-09!3;UBERON:0005290!1.57e-09!3;UBERON:0010096!1.57e-09!3;UBERON:0000988!2.62e-09!3;UBERON:0002346!2.87e-09!90;UBERON:0004733!1.18e-08!12;UBERON:0002028!1.18e-08!12;UBERON:0007277!1.18e-08!12;UBERON:0001017!1.57e-08!82;UBERON:0000033!1.77e-08!123;UBERON:0004121!1.89e-08!169;UBERON:0000924!3.53e-08!173;UBERON:0006601!3.53e-08!173;UBERON:0000989!4.07e-08!1;UBERON:0008811!4.07e-08!1;UBERON:0006258!4.07e-08!1;UBERON:0005876!4.07e-08!1;UBERON:0004874!4.07e-08!1;UBERON:0007029!4.35e-08!1;UBERON:0002135!4.66e-08!1;UBERON:0005743!4.79e-08!86;UBERON:0002426!4.99e-08!1;UBERON:0003831!4.99e-08!1;UBERON:0003898!4.99e-08!1;UBERON:0004830!4.99e-08!1;UBERON:0001774!4.99e-08!1;UBERON:0003830!4.99e-08!1;UBERON:0005175!4.99e-08!1;UBERON:0003897!4.99e-08!1;UBERON:0001103!4.99e-08!1;UBERON:0010084!4.99e-08!1;UBERON:0002146!5.33e-08!1;UBERON:0005623!5.33e-08!1;UBERON:0004732!5.37e-08!13;UBERON:0002084!5.70e-08!1;UBERON:0002082!5.70e-08!1;UBERON:0004706!5.70e-08!1;UBERON:0001893!5.75e-08!34;UBERON:0003103!6.71e-08!69;UBERON:0001736!7.45e-08!1;UBERON:0006298!7.45e-08!1;UBERON:0002336!7.97e-08!1;UBERON:0001018!7.97e-08!1;UBERON:0002473!7.97e-08!1;UBERON:0005340!7.97e-08!1;UBERON:0002316!7.97e-08!1;UBERON:0003544!7.97e-08!1;UBERON:0001020!7.97e-08!1;UBERON:0005970!7.97e-08!1;UBERON:0002437!7.97e-08!1;UBERON:0002902!1.44e-07!1;UBERON:0009899!1.44e-07!1;UBERON:0007190!1.64e-07!1;UBERON:0002581!1.75e-07!1;UBERON:0001882!1.87e-07!1;UBERON:0005403!1.87e-07!1;UBERON:0000073!4.20e-07!94;UBERON:0001016!4.20e-07!94;UBERON:0003076!6.07e-07!15;UBERON:0003057!6.07e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;7.81e-45;3!UBERON:0001033;7.81e-45;3!UBERON:0007100;1.28e-12;25!UBERON:0000020;9.39e-07;23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,9.77e-45,3;UBERON:0001033,9.77e-45,3;UBERON:0010056,9.77e-45,3;UBERON:0001042,3.04e-14,10;UBERON:0009145,3.04e-14,10;UBERON:0006562,4.80e-13,11;UBERON:0003103,1.36e-12,68;UBERON:0007100,9.63e-12,27;UBERON:0008814,2.33e-08,18;UBERON:0001557,5.73e-08,19;UBERON:0000166,5.24e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.687481272035051,0,0.199679000498991,1.28767814440971,1.56220020209311,1.07493555978762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33461648913121,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.476128862927481,0,0,0,0,0,1.08858373948481,2.39563310759697,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@C3orf45 | |||
}} |
Revision as of 00:40, 13 September 2013
Short description: | p4@C3orf45 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_C3orf45_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_EU832119, EU832213_5end |
EntrezGene: | C3orf45 |
HGNC: | 26781 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 9.77e-45 | 3 |
gustatory system | 9.77e-45 | 3 |
future tongue | 9.77e-45 | 3 |
chordate pharynx | 3.04e-14 | 10 |
pharyngeal region of foregut | 3.04e-14 | 10 |
pharynx | 4.80e-13 | 11 |
compound organ | 1.36e-12 | 68 |
primary circulatory organ | 9.63e-12 | 27 |
pharyngeal arch system | 2.33e-08 | 18 |
upper respiratory tract | 5.73e-08 | 19 |
oral opening | 5.24e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
heart disease | 9.07e-18 | 2 |
cardiovascular system disease | 1.44e-09 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.