FFCP PHASE1:Hg19::chr3:118864847..118864854,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=152404|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16669|TSSclassifier=S|UniProt=|association_with_transcript=-7bp_to_ENST00000494802_5end|coexpression_cluster_id=C1|description=CAGE_peak_10_at_IGSF11_5end|id=chr3:118864847..118864854,-|ontology_enrichment_celltype=CL:0002535!2.07e-10!2|ontology_enrichment_celltype_v019=CL:0002535;6.30e-21;2!CL:0002543;7.01e-08;6|ontology_enrichment_celltype_v019_2=CL:0002535,6.96e-21,2;CL:0002543,6.78e-08,6|ontology_enrichment_development_v019=UBERON:0009117;6.14e-17;10!UBERON:0005564;6.14e-17;10|ontology_enrichment_disease=DOID:0050619!3.91e-19!1;DOID:1357!3.91e-19!1|ontology_enrichment_disease_v019=DOID:4362;3.35e-09;5|ontology_enrichment_disease_v019_2=DOID:4362,3.49e-09,5|ontology_enrichment_uberon=UBERON:0001764!3.91e-19!1;UBERON:0001825!3.91e-19!1;UBERON:0006955!2.07e-10!2;UBERON:0004801!2.07e-10!2;UBERON:0000007!2.27e-10!2;UBERON:0000473!3.52e-10!8;UBERON:0003133!1.59e-09!48;UBERON:0000995!2.57e-08!21;UBERON:0005795!5.79e-08!22;UBERON:0003975!5.79e-08!22;UBERON:0005156!9.40e-08!59;UBERON:0000990!9.40e-08!59;UBERON:0003135!1.20e-07!11;UBERON:0004175!4.50e-07!25|ontology_enrichment_uberon_v019=UBERON:0006955;6.30e-21;2!UBERON:0004801;6.30e-21;2!UBERON:0000473;6.99e-21;8!UBERON:0003135;1.68e-15;11!UBERON:0000991;1.29e-08;21!UBERON:0003101;2.88e-08;22!UBERON:0000079;2.88e-08;22!UBERON:0000002;7.01e-08;6!UBERON:0001560;7.01e-08;6!UBERON:0003133;7.93e-08;44|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.64e-21,8;UBERON:0006955,6.96e-21,2;UBERON:0004801,6.96e-21,2;UBERON:0003135,1.62e-15,11;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22;UBERON:0003133,3.04e-08,48;UBERON:0000002,7.25e-08,6;UBERON:0001560,7.25e-08,6;UBERON:0005156,7.68e-07,59;UBERON:0000990,7.68e-07,59|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16115474571226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51159648712566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5006970412019,6.96706738406064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p10@IGSF11}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=152404 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16669 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-7bp_to_ENST00000494802_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_10_at_IGSF11_5end | |||
|id=chr3:118864847..118864854,- | |||
|ontology_enrichment_celltype=CL:0002535!2.07e-10!2 | |||
|ontology_enrichment_celltype_v019=CL:0002535;6.30e-21;2!CL:0002543;7.01e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,6.96e-21,2;CL:0002543,6.78e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.14e-17;10!UBERON:0005564;6.14e-17;10 | |||
|ontology_enrichment_disease=DOID:0050619!3.91e-19!1;DOID:1357!3.91e-19!1 | |||
|ontology_enrichment_disease_v019=DOID:4362;3.35e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,3.49e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0001764!3.91e-19!1;UBERON:0001825!3.91e-19!1;UBERON:0006955!2.07e-10!2;UBERON:0004801!2.07e-10!2;UBERON:0000007!2.27e-10!2;UBERON:0000473!3.52e-10!8;UBERON:0003133!1.59e-09!48;UBERON:0000995!2.57e-08!21;UBERON:0005795!5.79e-08!22;UBERON:0003975!5.79e-08!22;UBERON:0005156!9.40e-08!59;UBERON:0000990!9.40e-08!59;UBERON:0003135!1.20e-07!11;UBERON:0004175!4.50e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;6.30e-21;2!UBERON:0004801;6.30e-21;2!UBERON:0000473;6.99e-21;8!UBERON:0003135;1.68e-15;11!UBERON:0000991;1.29e-08;21!UBERON:0003101;2.88e-08;22!UBERON:0000079;2.88e-08;22!UBERON:0000002;7.01e-08;6!UBERON:0001560;7.01e-08;6!UBERON:0003133;7.93e-08;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.64e-21,8;UBERON:0006955,6.96e-21,2;UBERON:0004801,6.96e-21,2;UBERON:0003135,1.62e-15,11;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22;UBERON:0003133,3.04e-08,48;UBERON:0000002,7.25e-08,6;UBERON:0001560,7.25e-08,6;UBERON:0005156,7.68e-07,59;UBERON:0000990,7.68e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16115474571226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51159648712566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5006970412019,6.96706738406064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@IGSF11 | |||
}} |
Revision as of 20:59, 12 September 2013
Short description: | p10@IGSF11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_IGSF11_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -7bp_to_ENST00000494802_5end |
EntrezGene: | IGSF11 |
HGNC: | 16669 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 6.96e-21 | 2 |
vein endothelial cell | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 6.64e-21 | 8 |
uterine epithelium | 6.96e-21 | 2 |
cervix epithelium | 6.96e-21 | 2 |
male reproductive organ | 1.62e-15 | 11 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |
reproductive organ | 3.04e-08 | 48 |
uterine cervix | 7.25e-08 | 6 |
neck of organ | 7.25e-08 | 6 |
reproductive structure | 7.68e-07 | 59 |
reproductive system | 7.68e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 3.49e-09 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.